Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304D12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001286-1|AAN71042.1|  932|Drosophila melanogaster AT09001p pro...    30   1.7  
AY094627-1|AAM10980.1|  787|Drosophila melanogaster AT01413p pro...    30   1.7  
AE014297-3217|AAF56048.1|  919|Drosophila melanogaster CG4907-PA...    30   1.7  
AE014296-737|AAN11577.1|  406|Drosophila melanogaster CG32257-PA...    29   2.9  

>BT001286-1|AAN71042.1|  932|Drosophila melanogaster AT09001p
           protein.
          Length = 932

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -1

Query: 404 RPIVSKRYFYPLLKVAFGTKRLLKKI-VWFILITTTVYYYYNFSNKN*PTGFYCSFLIKK 228
           +P+ S R F+P   +      +L KI +  I++ +++Y   +F  KN  + F C FL+  
Sbjct: 798 KPMTS-RLFFPQFHLHMLVAFILLKIFIPSIIVMSSIYALVSFGRKNARSIFICLFLMND 856

Query: 227 NLFEYF 210
            +  YF
Sbjct: 857 AMSLYF 862


>AY094627-1|AAM10980.1|  787|Drosophila melanogaster AT01413p
           protein.
          Length = 787

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -1

Query: 404 RPIVSKRYFYPLLKVAFGTKRLLKKI-VWFILITTTVYYYYNFSNKN*PTGFYCSFLIKK 228
           +P+ S R F+P   +      +L KI +  I++ +++Y   +F  KN  + F C FL+  
Sbjct: 653 KPMTS-RLFFPQFHLHMLVAFILLKIFIPSIIVMSSIYALVSFGRKNARSIFICLFLMND 711

Query: 227 NLFEYF 210
            +  YF
Sbjct: 712 AMSLYF 717


>AE014297-3217|AAF56048.1|  919|Drosophila melanogaster CG4907-PA
           protein.
          Length = 919

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -1

Query: 404 RPIVSKRYFYPLLKVAFGTKRLLKKI-VWFILITTTVYYYYNFSNKN*PTGFYCSFLIKK 228
           +P+ S R F+P   +      +L KI +  I++ +++Y   +F  KN  + F C FL+  
Sbjct: 785 KPMTS-RLFFPQFHLHMLVAFILLKIFIPSIIVMSSIYALVSFGRKNVRSIFICLFLMND 843

Query: 227 NLFEYF 210
            +  YF
Sbjct: 844 AMSLYF 849


>AE014296-737|AAN11577.1|  406|Drosophila melanogaster CG32257-PA
           protein.
          Length = 406

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 64  RTSCSI*NYFLKSTYKYEKQQTYKILVMLTWNLLFLTK*QETI 192
           RT C I   + +S YK+E+   Y IL    W L  L    +TI
Sbjct: 161 RTQCKINVTYFESIYKWERPHLYMILPYHFWMLPILEWVNQTI 203


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,609,421
Number of Sequences: 53049
Number of extensions: 381306
Number of successful extensions: 685
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)