Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304D11f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 238 2e-63
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 238 2e-63
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 237 3e-63
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 237 3e-63
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 237 3e-63
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 235 2e-62
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 235 2e-62
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 235 2e-62
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 232 1e-61
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 28 3.5
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 28 3.5
U22832-1|AAA64507.1| 293|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical pr... 27 6.2
AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical ... 27 6.2
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 27 8.1
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 27 8.1
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 238 bits (582), Expect = 2e-63
Identities = 119/168 (70%), Positives = 138/168 (82%), Gaps = 7/168 (4%)
Frame = +3
Query: 39 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 215
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 216 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 380
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 381 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIH 521
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVIN 171
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 238 bits (582), Expect = 2e-63
Identities = 119/168 (70%), Positives = 138/168 (82%), Gaps = 7/168 (4%)
Frame = +3
Query: 39 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 215
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 216 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 380
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 381 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIH 521
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVIN 171
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 237 bits (581), Expect = 3e-63
Identities = 118/168 (70%), Positives = 138/168 (82%), Gaps = 7/168 (4%)
Frame = +3
Query: 39 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 215
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 216 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 380
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 381 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIH 521
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVIN 171
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 237 bits (581), Expect = 3e-63
Identities = 118/168 (70%), Positives = 138/168 (82%), Gaps = 7/168 (4%)
Frame = +3
Query: 39 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 215
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 216 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 380
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 381 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIH 521
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVIN 171
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 237 bits (581), Expect = 3e-63
Identities = 118/168 (70%), Positives = 138/168 (82%), Gaps = 7/168 (4%)
Frame = +3
Query: 39 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 215
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 216 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 380
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 381 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIH 521
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVIN 171
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 235 bits (574), Expect = 2e-62
Identities = 116/166 (69%), Positives = 139/166 (83%), Gaps = 7/166 (4%)
Frame = +3
Query: 45 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 221
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 222 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 386
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 387 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIH 521
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVIN 171
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 235 bits (574), Expect = 2e-62
Identities = 116/166 (69%), Positives = 139/166 (83%), Gaps = 7/166 (4%)
Frame = +3
Query: 45 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 221
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 222 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 386
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 387 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIH 521
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVIN 171
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 235 bits (574), Expect = 2e-62
Identities = 116/166 (69%), Positives = 139/166 (83%), Gaps = 7/166 (4%)
Frame = +3
Query: 45 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 221
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 222 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 386
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 387 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIH 521
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVIN 171
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 232 bits (567), Expect = 1e-61
Identities = 115/166 (69%), Positives = 138/166 (83%), Gaps = 7/166 (4%)
Frame = +3
Query: 45 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 221
+GINGFGRIGRLVLRA++EK + V A+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 222 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 386
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 387 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIH 521
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVIN 171
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 29.9 bits (64), Expect = 1.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 50 NQWIWPHWPFGAP 88
N+ +WPHW FG+P
Sbjct: 426 NEQVWPHWRFGSP 438
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 142 PMKGSFIATT*APFSIEARSTKRP-MRPNPLIPIFDMLSASYR 17
PM S T + S+E+ TKR R NP+ P FD++ + R
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVIDGTAR 211
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 142 PMKGSFIATT*APFSIEARSTKRP-MRPNPLIPIFDMLSASYR 17
PM S T + S+E+ TKR R NP+ P FD++ + R
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVIDGTAR 211
>U22832-1|AAA64507.1| 293|Caenorhabditis elegans Hypothetical
protein C09F5.2 protein.
Length = 293
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 108 AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDGFLVVNGN 242
A +V + F+ Y+++ + + GRFK V+ FL V N
Sbjct: 235 AMLVPVGVVFVVFSYLIHKNRVSHSLGRFKHKVDTMKQFLDVEAN 279
>Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical
protein R09D1.5 protein.
Length = 429
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 257 ENGNFVTVNNKESI-LNLNTALKTAMGGIILEKINHIVKTDE 135
E GNF+T NK+SI L A++ +GG+ + ++ + +E
Sbjct: 365 ETGNFLTFENKKSIEAKLAYAIEHNLGGVWIHLVDKDNENEE 406
>AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical
protein B0524.4 protein.
Length = 772
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +3
Query: 195 KGSVEVQDGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGA 374
KG+++ D F V G K+A E GK+GA+ G KA A GGA
Sbjct: 707 KGTLKELDAFFVAYGKKLA---EGGKAGNSGGKSGAKNGPGKAGAKNEPGKAGA--GGGA 761
Query: 375 KK 380
KK
Sbjct: 762 KK 763
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +3
Query: 255 FSERDPKAIPWGKAGAEYVVESTGVFT----TTDKASAHLEGGAKKVIISAPSADAP 413
F E DP+ + W KA + V E F TT G A SAPSA AP
Sbjct: 945 FKETDPRHVEWTKAW-KAVFEEMQKFVRQVHTTGLVWNSAPGAAPDASASAPSAAAP 1000
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +3
Query: 255 FSERDPKAIPWGKAGAEYVVESTGVFT----TTDKASAHLEGGAKKVIISAPSADAP 413
F E DP+ + W KA + V E F TT G A SAPSA AP
Sbjct: 184 FKETDPRHVEWTKAW-KAVFEEMQKFVRQVHTTGLVWNSAPGAAPDASASAPSAAAP 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,832,688
Number of Sequences: 27780
Number of extensions: 271583
Number of successful extensions: 667
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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