Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304D10f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 154 1e-36
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 50 2e-05
UniRef50_Q28RA2 Cluster: ComEC/Rec2-related protein; n=2; Rhodob... 36 0.43
UniRef50_UPI00005A9609 Cluster: PREDICTED: similar to USP6 N-ter... 34 1.7
UniRef50_A6C543 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q640I9 Cluster: JmjC domain-containing histone demethyl... 33 3.0
UniRef50_Q4S0K4 Cluster: Chromosome 2 SCAF14781, whole genome sh... 32 6.9
UniRef50_Q9QJ59 Cluster: B4; n=1; Human herpesvirus 6B|Rep: B4 -... 32 6.9
UniRef50_UPI0000E48AB6 Cluster: PREDICTED: similar to B-cell lin... 32 9.2
UniRef50_UPI00005A604F Cluster: PREDICTED: similar to USP6 N-ter... 32 9.2
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 154 bits (373), Expect = 1e-36
Identities = 73/85 (85%), Positives = 74/85 (87%)
Frame = +1
Query: 1 LHDDLGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYSPNPDHAGASXXXXXXXVLTD 180
LHDDLGLESIRK+MKS SERYFDKAMRHDNRLIVAAADYSPNPDHAGAS VLTD
Sbjct: 863 LHDDLGLESIRKHMKSVSERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLTD 922
Query: 181 PSDPITFALDAFSSNTRSRLRDPGN 255
PSDPIT ALD FSSNTRSRLR PGN
Sbjct: 923 PSDPITLALDTFSSNTRSRLRSPGN 947
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 50.4 bits (115), Expect = 2e-05
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +1
Query: 1 LHDDLGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYSPNPDHAGASXXXXXXXVLTD 180
LH +L + SI Y+KS + YF+KA H + L+V+AA+Y P P+ A + D
Sbjct: 74 LHRNLEIPSIWTYVKSLTISYFEKAANHPSPLVVSAANYQPVPN--AARPRRRPRHIFID 131
Query: 181 PSDPITFALDAFSSNTRSR 237
P D IT D + + +R
Sbjct: 132 PPDEITAVNDQYQPVSPNR 150
>UniRef50_Q28RA2 Cluster: ComEC/Rec2-related protein; n=2;
Rhodobacteraceae|Rep: ComEC/Rec2-related protein -
Jannaschia sp. (strain CCS1)
Length = 706
Score = 36.3 bits (80), Expect = 0.43
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -1
Query: 503 PEGLSSFTRTGGRAKAQPRGAGFANNCPSASEGDLTTQE 387
P GL T GRA ++PRG GF ++GDL TQE
Sbjct: 540 PGGLVGLTTDQGRALSRPRGDGFVAGIWLENDGDLITQE 578
>UniRef50_UPI00005A9609 Cluster: PREDICTED: similar to USP6
N-terminal like protein (Related to the N terminus of
tre) (RN-tre), partial; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to USP6 N-terminal like protein
(Related to the N terminus of tre) (RN-tre), partial -
Canis familiaris
Length = 386
Score = 34.3 bits (75), Expect = 1.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 388 SNCFANESTTGSESRPAEKIRRETQRADAWVRL 290
S C ++ G R A+K+R+ET RAD W+++
Sbjct: 27 SPCAGDKELPGPSPREAKKLRQETWRADKWIKM 59
>UniRef50_A6C543 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 1247
Score = 33.9 bits (74), Expect = 2.3
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 LHDDLGLESIR-KYMKSASERYFDKAMRHDNRLIVAAADYSPNP 129
+HDDLG+E + +Y KS+S+ +A+R D + P P
Sbjct: 444 VHDDLGIEDVLIRYQKSSSQETLSRALRTDRENFSFRLPFPPEP 487
>UniRef50_Q640I9 Cluster: JmjC domain-containing histone
demethylation protein 1B; n=5; Xenopus|Rep: JmjC
domain-containing histone demethylation protein 1B -
Xenopus laevis (African clawed frog)
Length = 1259
Score = 33.5 bits (73), Expect = 3.0
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -2
Query: 463 QRLSQEGRDLLTTARAPPKET*QLKSNC-FANESTTGSESRPAEKIRRE 320
+R+ QE D LT A KE+ Q +S+ A ST GSE + +KIRR+
Sbjct: 812 RRIKQEPDDDLTEAAPKAKESDQSRSSSPTAGPSTEGSEPKEKKKIRRK 860
>UniRef50_Q4S0K4 Cluster: Chromosome 2 SCAF14781, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 2
SCAF14781, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 862
Score = 32.3 bits (70), Expect = 6.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 509 WWPEGLSSFTRTGGRAKAQPRGAGFANNCPSASE 408
W+ E S + G R +A+PR G A + P+ASE
Sbjct: 374 WFEEASESQSSRGTRPQARPRAGGSAQSAPAASE 407
>UniRef50_Q9QJ59 Cluster: B4; n=1; Human herpesvirus 6B|Rep: B4 -
Human herpesvirus 6B
Length = 193
Score = 32.3 bits (70), Expect = 6.9
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +3
Query: 282 STCNLTHASAR*VSRRIFS-AGRDSDPVVDSFAKQLLLSC*VSFGGARAVVSKSRPSWLS 458
S L H + V +++ AGR + P V F + L S + G + S RP W S
Sbjct: 79 SRAYLHHRNGSGVYKKVIRPAGRSAHPPVGRFYTRPLFSLSRATCGPSSGTSAPRPRWRS 138
Query: 459 LCSPTCPGETGKAFGPPVN 515
L G G++ PP +
Sbjct: 139 LTLGGAHGPRGRSLFPPAS 157
>UniRef50_UPI0000E48AB6 Cluster: PREDICTED: similar to B-cell
linker; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to B-cell linker - Strongylocentrotus
purpuratus
Length = 591
Score = 31.9 bits (69), Expect = 9.2
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = -2
Query: 484 SPGQVGEQRLSQEGRDLLTTARAPPKET*QLKSNCFANESTTGSESRPAEKIRRETQRAD 305
+P V ++ +++ G + PP + + ++ S++GSES P + R+E +++
Sbjct: 351 TPSSVVQRPVTKGGNSVPRKPGIPPSTSSTASVSSVSSSSSSGSESGPPARQRKEPWKSE 410
Query: 304 AW 299
+W
Sbjct: 411 SW 412
>UniRef50_UPI00005A604F Cluster: PREDICTED: similar to USP6
N-terminal like; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to USP6 N-terminal like - Canis
familiaris
Length = 752
Score = 31.9 bits (69), Expect = 9.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 379 FANESTTGSESRPAEKIRRETQRADAWVRL 290
+ ++ G R A+K+R+ET RAD W+++
Sbjct: 9 YRDKELPGPSPREAKKLRQETPRADKWIKM 38
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,461,032
Number of Sequences: 1657284
Number of extensions: 8899603
Number of successful extensions: 23214
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23203
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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