Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304D10f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    25   2.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.6  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   6.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.2  

>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 367 IHSRNNCS*VVRSPSEALGQLLANPAP 447
           + S ++C+  ++ P E LGQ +AN  P
Sbjct: 34  LQSVHDCTEYLQIPKERLGQYMANEFP 60


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 505 GPKAFPVSPGQVGEQRLSQEGRDL 434
           G K F   PG++GE+ L  E  D+
Sbjct: 421 GEKGFKGEPGRIGERGLMGEKGDM 444


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 382 CFANESTTGSESRPAEKIRRETQRADAWVR 293
           CF +  +  S+S  +E  + + +R+DA  R
Sbjct: 3   CFGSAGSKQSDSNSSEDTKSQKRRSDAITR 32


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 266 ELDKEVDVQPDPCISPLSF 322
           +L +E+   PDP + PLS+
Sbjct: 302 DLRRELKSIPDPTVGPLSY 320


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 101 LPPLTTPRILIMQEPVTVDAVDTSLRIHQIQ 193
           L P TTP    +     V AVD  LR H ++
Sbjct: 679 LAPGTTPAAAAVVAEEAVSAVDRWLREHHLE 709


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,991
Number of Sequences: 2352
Number of extensions: 8310
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)