Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304D09f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   1.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   2.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +3

Query: 180 RSWWTRYPRPGRDGASTLQQ--TPSLDASPALRPFISR 287
           RS    + R  RDG  TLQQ  TP++     +  F +R
Sbjct: 637 RSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVIQFSNR 674


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/53 (20%), Positives = 24/53 (45%)
 Frame = -1

Query: 167 ISGKTIYFRLTFSLCFALGMLMT*KLCFHKFFFNYFYARAYIVFELY*SDTFC 9
           + G+ I   L + L F + +L    LC+  +++   Y   +  + L   + +C
Sbjct: 90  LKGRKIRKNLYYLLLFVINVLYVLTLCYAVYYWRQQYEDFWHRYTLSFIENYC 142


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 164 SGKTIYFRLTFSLCFALGMLMT*KLCF 84
           SG  +YFR+ F   F L      K CF
Sbjct: 217 SGDEMYFRVAFPSVFTLIDYSLWKACF 243


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 153 NLF*VNVFTLFCTWNVNDIEVVFS 82
           NL  + VF L C    +DI++ F+
Sbjct: 923 NLLPIAVFILVCATCSSDIQLFFA 946


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 153 NLF*VNVFTLFCTWNVNDIEVVFS 82
           NL  + VF L C    +DI++ F+
Sbjct: 923 NLLPIAVFILVCATCSSDIQLFFA 946


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,174
Number of Sequences: 336
Number of extensions: 2318
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)