Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304D07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.54 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = +3

Query: 15   CYTNIDTEESTY*MIHFVITIKEQLQKLFYFFKVQILLQRKCFCNSKLFNLN 170
            CY+ I     +  +IH + T   ++      F +QIL +R  F  +  F ++
Sbjct: 929  CYSTIQEVSKSGELIHKIATNDHEIIDKIEMFSLQILNERAGFTAAGFFPID 980



 Score = 21.0 bits (42), Expect = 6.6
 Identities = 13/52 (25%), Positives = 22/52 (42%)
 Frame = +3

Query: 15  CYTNIDTEESTY*MIHFVITIKEQLQKLFYFFKVQILLQRKCFCNSKLFNLN 170
           CY+ I T      +IH + T    +      F +QI  ++  F  +  F +N
Sbjct: 301 CYSTIGTVSKAGELIHQIQTEDHDIIDEIEMFSLQIANEQVEFNAAGFFPIN 352



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 363 CTLIHSSEFSRFVT 322
           CTL++  +FS F+T
Sbjct: 738 CTLMNRCKFSEFMT 751


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = +3

Query: 15  CYTNIDTEESTY*MIHFVITIKEQLQKLFYFFKVQILLQRKCFCNSKLFNLN 170
           CY+ I+       +IH + T    ++     F +QI  ++  F  +  F +N
Sbjct: 580 CYSTIEEANKAGELIHKIDTEDHDIRDEIEMFSLQIANEQVEFNAAGFFAIN 631


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = +3

Query: 15  CYTNIDTEESTY*MIHFVITIKEQLQKLFYFFKVQILLQRKCFCNSKLFNLN 170
           CY+ I+       +IH + T    ++     F +QI  ++  F  +  F +N
Sbjct: 305 CYSTIEEANKAGELIHKIDTEDHDIRDEIEMFSLQIANEQVEFNAAGFFAIN 356


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 497 LNNIRVRIXTSEQEDGEFLSHVIFIQLRSTEILFFGGLTQFDPIRVH*YTHLNSAGS*LE 318
           + NI + +    +E+ E L +VI      + ++   G TQF    V   T   +  + LE
Sbjct: 150 IGNIAMELWNMPRENIEPLPNVILACHMLSFLMVHQGETQFVAANVILKTRFKTINNILE 209

Query: 317 N 315
           N
Sbjct: 210 N 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,816
Number of Sequences: 336
Number of extensions: 2365
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)