Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304D06f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S... 69 7e-11
UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n... 64 2e-09
UniRef50_Q15670 Cluster: Alpha-tubulin isotype H2-alpha; n=5; Eu... 55 1e-06
UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protei... 54 2e-06
UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970; Eukaryot... 54 2e-06
UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome sh... 53 3e-06
UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 51 1e-05
UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37; Eukary... 50 4e-05
UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4; Magnoli... 50 4e-05
UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2; Tr... 49 6e-05
UniRef50_UPI00005A297F Cluster: PREDICTED: similar to tubulin, a... 49 7e-05
UniRef50_Q4S633 Cluster: Chromosome 9 SCAF14729, whole genome sh... 48 1e-04
UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493; Eukaryota... 48 1e-04
UniRef50_UPI00005A5664 Cluster: PREDICTED: similar to tubulin al... 48 1e-04
UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|R... 48 1e-04
UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=... 47 3e-04
UniRef50_Q3UX10 Cluster: In vitro fertilized eggs cDNA, RIKEN fu... 46 7e-04
UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30; Eukary... 45 0.001
UniRef50_UPI0000DC0F37 Cluster: UPI0000DC0F37 related cluster; n... 44 0.002
UniRef50_Q5B2Z8 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing... 44 0.003
UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1; ... 43 0.004
UniRef50_Q7QW53 Cluster: GLP_457_13116_11626; n=1; Giardia lambl... 43 0.005
UniRef50_A7M6D9 Cluster: Alpha-tubulin; n=1; Dugesia ryukyuensis... 43 0.005
UniRef50_UPI0000660846 Cluster: Homolog of Notothenia coriiceps ... 42 0.009
UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, wh... 42 0.009
UniRef50_UPI0000F2BF49 Cluster: PREDICTED: similar to MGC53359 p... 42 0.011
UniRef50_Q66TV8 Cluster: Tubulin; n=1; Culicoides sonorensis|Rep... 41 0.020
UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n... 40 0.026
UniRef50_UPI000155C428 Cluster: PREDICTED: similar to tubulin al... 39 0.080
UniRef50_Q3SEF7 Cluster: Alpha-tubulin,putative; n=3; Paramecium... 39 0.080
UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiell... 38 0.11
UniRef50_Q23WP5 Cluster: Tubulin/FtsZ family, GTPase domain cont... 38 0.11
UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2; Thermoprot... 38 0.11
UniRef50_UPI00005A2266 Cluster: PREDICTED: similar to Tubulin al... 38 0.18
UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2; ... 37 0.32
UniRef50_UPI0000DC0C7D Cluster: UPI0000DC0C7D related cluster; n... 36 0.56
UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n... 36 0.56
UniRef50_Q8ZV51 Cluster: Ribosomal protein S30; n=11; Thermoprot... 36 0.56
UniRef50_UPI0000EB04B1 Cluster: UPI0000EB04B1 related cluster; n... 36 0.74
UniRef50_Q7R5Z2 Cluster: GLP_81_67830_68102; n=1; Giardia lambli... 36 0.74
UniRef50_Q2W289 Cluster: Transcriptional regulator; n=2; Magneto... 35 0.98
UniRef50_A0DAZ7 Cluster: Chromosome undetermined scaffold_43, wh... 35 0.98
UniRef50_Q9Y9T9 Cluster: 30S ribosomal protein S30; n=2; Thermop... 35 0.98
UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146... 35 1.3
UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza sa... 34 1.7
UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to UBIQUITIN-... 34 2.3
UniRef50_Q22CD2 Cluster: Tubulin/FtsZ family, GTPase domain cont... 34 2.3
UniRef50_A4AQR2 Cluster: Putative mannosidase; n=1; Flavobacteri... 32 6.9
UniRef50_Q7Z1L8 Cluster: Alpha-tubulin; n=2; Eukaryota|Rep: Alph... 32 6.9
>UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep:
S30-ubiquitin-like - Suberites domuncula (Sponge)
Length = 134
Score = 68.9 bits (161), Expect = 7e-11
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 181
MQ+ ++G + H ++V+ + + Q+K + + ED LS G P
Sbjct: 1 MQVFVQGGALHAINVSEETTFNQLKSELVLSEGITVEDQVLSYGGVPLEDDTLVCEIVPE 60
Query: 182 XXXXT--VPLLGGKVHGSLARAGKVKGQTPKVEKKKKK 289
+ V ++GGKVHGSLARAGKV+GQTPKVE ++KK
Sbjct: 61 LATLSLAVRVVGGKVHGSLARAGKVRGQTPKVEAQEKK 98
>UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F33F66 UniRef100 entry - Bos
Taurus
Length = 128
Score = 63.7 bits (148), Expect = 2e-09
Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +2
Query: 11 HIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXXXXX 190
H + Q H L V GQE + QIK + +L +D L L G P
Sbjct: 4 HAQSQELHTLKVTGQEMVAQIKAHVASLEG---KDQVLLLAGTPLEDEVTLGQCEVEALS 60
Query: 191 XTVP---LLGGKVHGSLARAGKVKGQTPKVEKKKKK 289
+LGGKVHGSL AGKV+GQTPKV+K+ K+
Sbjct: 61 TLEVVGRMLGGKVHGSLDCAGKVRGQTPKVDKESKR 96
>UniRef50_Q15670 Cluster: Alpha-tubulin isotype H2-alpha; n=5;
Euteleostomi|Rep: Alpha-tubulin isotype H2-alpha - Homo
sapiens (Human)
Length = 98
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 62 EEGEFSEAREDLAALEKDYEEVGVDS 87
>UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protein
30; n=3; Caenorhabditis|Rep: Ribosomal protein, small
subunit protein 30 - Caenorhabditis elegans
Length = 130
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +2
Query: 203 LLGGKVHGSLARAGKVKGQTPKVEKKKKK 289
LLGGKVHGSLARAGKV+ QTPKV+K+ KK
Sbjct: 68 LLGGKVHGSLARAGKVRAQTPKVDKQDKK 96
>UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970;
Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens
(Human)
Length = 451
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEGEFSEARED+AALEKDYEEVG+DS
Sbjct: 414 EEGEFSEAREDMAALEKDYEEVGVDS 439
>UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 3
SCAF14614, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 407
Score = 53.2 bits (122), Expect = 3e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEGEFSEARED+AALEKDYEEVG DS
Sbjct: 371 EEGEFSEAREDMAALEKDYEEVGTDS 396
>UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 416
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEGEFSEARE +AALEKDYEEVG+DS
Sbjct: 379 EEGEFSEAREHMAALEKDYEEVGVDS 404
>UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37;
Eukaryota|Rep: 40S ribosomal protein S30 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 212 GKVHGSLARAGKVKGQTPKVEKKKK 286
GKVHGSLARAGKVK QTPKVEK++K
Sbjct: 2 GKVHGSLARAGKVKSQTPKVEKQEK 26
>UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4;
Magnoliophyta|Rep: 40S ribosomal protein S30 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 62
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +2
Query: 212 GKVHGSLARAGKVKGQTPKVEKKKKK 289
GKVHGSLARAGKV+GQTPKV K+ KK
Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKK 27
>UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2;
Trichocomaceae|Rep: Ribosomal S30/ubiquitin fusion -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 78
Score = 49.2 bits (112), Expect = 6e-05
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +2
Query: 212 GKVHGSLARAGKVKGQTPKVEKKKKK 289
GKVHGSLARAGKVK TPKVEK++KK
Sbjct: 2 GKVHGSLARAGKVKSATPKVEKQEKK 27
>UniRef50_UPI00005A297F Cluster: PREDICTED: similar to tubulin,
alpha 1; n=2; Eutheria|Rep: PREDICTED: similar to
tubulin, alpha 1 - Canis familiaris
Length = 127
Score = 48.8 bits (111), Expect = 7e-05
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEGEFSEARED+ ALEKDYEEV +DS
Sbjct: 91 EEGEFSEAREDMDALEKDYEEVDVDS 116
>UniRef50_Q4S633 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 404
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVG 453
EEGEFSEARED+AALEKDYEE+G
Sbjct: 369 EEGEFSEAREDMAALEKDYEELG 391
>UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493;
Eukaryota|Rep: Tubulin alpha-1 chain - Saccharomyces
cerevisiae (Baker's yeast)
Length = 447
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEGEF+EAREDLAALE+DY EVG DS
Sbjct: 415 EEGEFTEAREDLAALERDYIEVGADS 440
>UniRef50_UPI00005A5664 Cluster: PREDICTED: similar to tubulin alpha
6; n=1; Canis lupus familiaris|Rep: PREDICTED: similar
to tubulin alpha 6 - Canis familiaris
Length = 182
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1
Query: 518 EGEFSEAREDLAALEKDYEEVGMDS 444
EGEF EAREDLAALEKDYEEVG +S
Sbjct: 148 EGEFLEAREDLAALEKDYEEVGTES 172
>UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|Rep:
40S ribosomal protein S30 - Homo sapiens (Human)
Length = 59
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +2
Query: 215 KVHGSLARAGKVKGQTPKVEKKKKK 289
KVHGSLARAGKV+GQTPKV K++KK
Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKK 25
>UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=4;
Leishmania|Rep: 40S ribosomal protein S30, putative -
Leishmania major
Length = 66
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 212 GKVHGSLARAGKVKGQTPKVEKKKK 286
GK+HGSLARAGKVK QTPKV K++K
Sbjct: 2 GKIHGSLARAGKVKNQTPKVAKQEK 26
>UniRef50_Q3UX10 Cluster: In vitro fertilized eggs cDNA, RIKEN
full-length enriched library, clone:7420443F16
product:similar to Alpha tubulin; n=4; Murinae|Rep: In
vitro fertilized eggs cDNA, RIKEN full-length enriched
library, clone:7420443F16 product:similar to Alpha
tubulin - Mus musculus (Mouse)
Length = 446
Score = 45.6 bits (103), Expect = 7e-04
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGM 450
E GEF EAREDLAALEKDYEEVG+
Sbjct: 421 ELGEFVEAREDLAALEKDYEEVGL 444
>UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30;
Eukaryota|Rep: 40S ribosomal protein S30 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 59
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +2
Query: 215 KVHGSLARAGKVKGQTPKVEKKKKK 289
KVHGSLARAGKV+GQTP V+K ++K
Sbjct: 1 KVHGSLARAGKVRGQTPNVDKHEEK 25
>UniRef50_UPI0000DC0F37 Cluster: UPI0000DC0F37 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0F37 UniRef100 entry -
Rattus norvegicus
Length = 410
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/26 (73%), Positives = 25/26 (96%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEGEFS+A +D+A+LEK+YEEVG+DS
Sbjct: 375 EEGEFSKACKDIASLEKNYEEVGVDS 400
>UniRef50_Q5B2Z8 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 599
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEG+FSEARE+LA LEKDYEE+ D+
Sbjct: 260 EEGKFSEARENLAVLEKDYEEIAGDT 285
>UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S30 containing protein - Tetrahymena
thermophila SB210
Length = 80
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +2
Query: 212 GKVHGSLARAGKVKGQTPKVEKKKK 286
G++HG+LA+AGKV+ QTPKVEKK K
Sbjct: 2 GRMHGTLAKAGKVRKQTPKVEKKDK 26
>UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 804
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEGEFSEAR++LA LEKDYEE+ D+
Sbjct: 768 EEGEFSEARKNLAVLEKDYEEITGDT 793
>UniRef50_Q7QW53 Cluster: GLP_457_13116_11626; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_457_13116_11626 - Giardia lamblia
ATCC 50803
Length = 496
Score = 42.7 bits (96), Expect = 0.005
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +3
Query: 402 IGLVLFGSLTLAFS-GVHADFFVILLEGSQVLTGFGELSLL 521
+G+VL L LA + G+ AD V+LLEG +VL G GEL+LL
Sbjct: 26 VGVVLLHVLALAVAKGLGADLLVVLLEGGEVLAGLGELALL 66
>UniRef50_A7M6D9 Cluster: Alpha-tubulin; n=1; Dugesia
ryukyuensis|Rep: Alpha-tubulin - Dugesia ryukyuensis
Length = 534
Score = 42.7 bits (96), Expect = 0.005
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEGEF EAR+DL LEKDYEE+G S
Sbjct: 413 EEGEFVEARDDLIKLEKDYEEIGNPS 438
>UniRef50_UPI0000660846 Cluster: Homolog of Notothenia coriiceps
"Alpha tubulin.; n=1; Takifugu rubripes|Rep: Homolog of
Notothenia coriiceps "Alpha tubulin. - Takifugu rubripes
Length = 306
Score = 41.9 bits (94), Expect = 0.009
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMD 447
E G S+ARED+AALEKDYEEVG D
Sbjct: 277 EGGGISKAREDMAALEKDYEEVGAD 301
>UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 92
Score = 41.9 bits (94), Expect = 0.009
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = +2
Query: 212 GKVHGSLARAGKVKGQTPKVEKKKKK 289
GK+HG+LA+AGKV+ QTPK+EK+ ++
Sbjct: 2 GKLHGTLAKAGKVRKQTPKIEKQVRR 27
>UniRef50_UPI0000F2BF49 Cluster: PREDICTED: similar to MGC53359
protein; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to MGC53359 protein - Monodelphis domestica
Length = 366
Score = 41.5 bits (93), Expect = 0.011
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGMDS 444
EEGEFSE +D+A LEKD EE+G+DS
Sbjct: 329 EEGEFSETWKDIAVLEKDDEEIGIDS 354
>UniRef50_Q66TV8 Cluster: Tubulin; n=1; Culicoides sonorensis|Rep:
Tubulin - Culicoides sonorensis
Length = 129
Score = 40.7 bits (91), Expect = 0.020
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -2
Query: 520 RRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKSTK-PMKY 395
++ +S KPV+ WL R+TKK AWT +K + + PK+ K P+++
Sbjct: 79 KKVNSLKPVKIWLLWGRVTKKLAWTLVKEKAKVPKNIKSPVEF 121
>UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB013B UniRef100
entry - Canis familiaris
Length = 109
Score = 40.3 bits (90), Expect = 0.026
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 2 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCG 136
MQL + Q H L+V GQE++ QIK + +L ++ ED + L G
Sbjct: 1 MQLFVWTQELHTLEVTGQETVTQIKTYVASLESIAPEDQVMLLAG 45
>UniRef50_UPI000155C428 Cluster: PREDICTED: similar to tubulin
alpha-3 chain - Chinese hamster; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to tubulin alpha-3
chain - Chinese hamster - Ornithorhynchus anatinus
Length = 300
Score = 38.7 bits (86), Expect = 0.080
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKD 468
EEGEFSEARED+AALEKD
Sbjct: 38 EEGEFSEAREDMAALEKD 55
>UniRef50_Q3SEF7 Cluster: Alpha-tubulin,putative; n=3; Paramecium
tetraurelia|Rep: Alpha-tubulin,putative - Paramecium
tetraurelia
Length = 426
Score = 38.7 bits (86), Expect = 0.080
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEV 456
E GE SE REDLAAL KDYEE+
Sbjct: 388 ESGEMSECREDLAALSKDYEEL 409
>UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiella
natans|Rep: Ribosomal protein S30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 55
Score = 38.3 bits (85), Expect = 0.11
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2
Query: 212 GKVHGSLARAGKVKGQTPKVEKKKKK 289
GKVHGSL RAGKV+ QT + K KK
Sbjct: 2 GKVHGSLTRAGKVRNQTKFIAKSDKK 27
>UniRef50_Q23WP5 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 450
Score = 38.3 bits (85), Expect = 0.11
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1
Query: 518 EGEFSEAREDLAALEKDYEEVGMDS 444
EG+ EARE LA++EKDYEE+ DS
Sbjct: 416 EGDLQEAREILASIEKDYEEISKDS 440
>UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2;
Thermoprotei|Rep: Ribosomal protein S30E - Cenarchaeum
symbiosum
Length = 60
Score = 38.3 bits (85), Expect = 0.11
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 221 HGSLARAGKVKGQTPKVEKKKK 286
HGSL +AGKV+ QTPK+E +KK
Sbjct: 4 HGSLTKAGKVRSQTPKIEGRKK 25
>UniRef50_UPI00005A2266 Cluster: PREDICTED: similar to Tubulin
alpha-2 chain (Alpha-tubulin 2); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to Tubulin alpha-2
chain (Alpha-tubulin 2) - Canis familiaris
Length = 250
Score = 37.5 bits (83), Expect = 0.18
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = -2
Query: 496 VRTWLPSRRITKKSAWTPLKARVREPKSTKPMKYLLWRTRTVLHS 362
VRTWLP RRI ++S W LK RV+ K + +Y ++ ++ HS
Sbjct: 206 VRTWLPWRRIMRRSVWILLKERVK--KKERNTEYHSFQPCSMSHS 248
>UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S30 - Entamoeba histolytica HM-1:IMSS
Length = 64
Score = 36.7 bits (81), Expect = 0.32
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2
Query: 212 GKVHGSLARAGKVKGQTPKVEK 277
GKVHG L RAGKV+ QT K EK
Sbjct: 2 GKVHGGLTRAGKVRNQTKKPEK 23
>UniRef50_UPI0000DC0C7D Cluster: UPI0000DC0C7D related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0C7D UniRef100 entry -
Rattus norvegicus
Length = 366
Score = 35.9 bits (79), Expect = 0.56
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVG 453
EEGE EA ED+A +KDYEEVG
Sbjct: 344 EEGEVFEAHEDMADPQKDYEEVG 366
>UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB4B7C UniRef100
entry - Canis familiaris
Length = 104
Score = 35.9 bits (79), Expect = 0.56
Identities = 28/86 (32%), Positives = 38/86 (44%)
Frame = +2
Query: 32 HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXXXXXXTVPLLG 211
H L V GQE + Q+K + +L + ED + L G P LG
Sbjct: 3 HTLKVTGQEMVAQMKAHVASLEGIAPEDQVVLLAGIPLEDE---------------ATLG 47
Query: 212 GKVHGSLARAGKVKGQTPKVEKKKKK 289
G A GKV+GQ PKV K++K+
Sbjct: 48 --QCGVEAPHGKVRGQAPKVAKQEKQ 71
>UniRef50_Q8ZV51 Cluster: Ribosomal protein S30; n=11;
Thermoprotei|Rep: Ribosomal protein S30 - Pyrobaculum
aerophilum
Length = 55
Score = 35.9 bits (79), Expect = 0.56
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 221 HGSLARAGKVKGQTPKVEKKKKK 289
HGSL +AGKV+ QTPK+ K +K
Sbjct: 4 HGSLTKAGKVRNQTPKIPAKPRK 26
>UniRef50_UPI0000EB04B1 Cluster: UPI0000EB04B1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB04B1 UniRef100
entry - Canis familiaris
Length = 387
Score = 35.5 bits (78), Expect = 0.74
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -1
Query: 518 EGEFSEAREDLAALEKDYEEVGMDS 444
EGEFSEA ED+AALEK Y V DS
Sbjct: 352 EGEFSEACEDMAALEKYYGAVDGDS 376
>UniRef50_Q7R5Z2 Cluster: GLP_81_67830_68102; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_67830_68102 - Giardia lamblia
ATCC 50803
Length = 90
Score = 35.5 bits (78), Expect = 0.74
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 425 PHPRL-QRSPCRLLRNPSRGQPGPHGLRRTLPP 520
P PR Q S R R+PSRG+ GP G RRT PP
Sbjct: 21 PRPRRRQGSRRRSPRSPSRGRRGPRGPRRTRPP 53
>UniRef50_Q2W289 Cluster: Transcriptional regulator; n=2;
Magnetospirillum|Rep: Transcriptional regulator -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 324
Score = 35.1 bits (77), Expect = 0.98
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 366 CKTVRVRHKRYFIGLVLFGSLTLAFSGVH 452
C+T+ +R RYF+G+V GSLT A +H
Sbjct: 18 CRTMDIRQLRYFLGIVEHGSLTKAAEALH 46
>UniRef50_A0DAZ7 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 400
Score = 35.1 bits (77), Expect = 0.98
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEE 459
EE +F EARE+LA L+KDYEE
Sbjct: 278 EEAQFVEAREELAFLQKDYEE 298
>UniRef50_Q9Y9T9 Cluster: 30S ribosomal protein S30; n=2;
Thermoprotei|Rep: 30S ribosomal protein S30 - Aeropyrum
pernix
Length = 50
Score = 35.1 bits (77), Expect = 0.98
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 221 HGSLARAGKVKGQTPKVEKKKKK 289
HGSL +AGKV+ QTP++ K+KK
Sbjct: 4 HGSLTKAGKVRKQTPRLPAKQKK 26
>UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146;
n=4; Euteleostomi|Rep: Uncharacterized protein
ENSP00000310146 - Homo sapiens (Human)
Length = 74
Score = 34.7 bits (76), Expect = 1.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 11 HIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAP 142
++R + H L+V G E++ Q K + +L + ED + L G+P
Sbjct: 4 YVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSP 47
>UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza
sativa|Rep: OSJNBb0048E02.10 protein - Oryza sativa
subsp. japonica (Rice)
Length = 423
Score = 34.3 bits (75), Expect = 1.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 19 RAIDTRPGRQWPGVHWSDQGTHSYSCCSWR*RPYSIIMWS 138
+A+ RP PG+HW++Q YS CS P I MW+
Sbjct: 368 KAMSMRPDAH-PGIHWNNQWMRGYSDCSHWCLPGPIDMWN 406
>UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to
UBIQUITIN-LIKE PROTEIN FUBI; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to UBIQUITIN-LIKE
PROTEIN FUBI - Canis familiaris
Length = 166
Score = 33.9 bits (74), Expect = 2.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 2 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAP 142
+QL +R H L+V G E+ IK + +L ED + L G+P
Sbjct: 17 VQLLVRAWELHTLEVTGLEAFAHIKTHVASLEGHTTEDKVVLLAGSP 63
>UniRef50_Q22CD2 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 443
Score = 33.9 bits (74), Expect = 2.3
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEE 459
EEGE +AREDLA LE DY++
Sbjct: 412 EEGELIQAREDLALLENDYQD 432
>UniRef50_A4AQR2 Cluster: Putative mannosidase; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
mannosidase - Flavobacteriales bacterium HTCC2170
Length = 295
Score = 32.3 bits (70), Expect = 6.9
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 490 TWLPSRRITKKSAWTPLKA--RVREPKSTKPMKYLLWRTR 377
+W P +TKKSAW P A +V E P KY W TR
Sbjct: 134 SWHPDNPVTKKSAWDPSPAVSQVLEGGLLSP-KYRAWLTR 172
>UniRef50_Q7Z1L8 Cluster: Alpha-tubulin; n=2; Eukaryota|Rep:
Alpha-tubulin - Schmidtea polychroa (Freshwater
planarian flatworm) (Dugesiapolychroa)
Length = 489
Score = 32.3 bits (70), Expect = 6.9
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -1
Query: 521 EEGEFSEAREDLAALEKDYEEVGM 450
EEGEF+EA ++++ L KDY+EV M
Sbjct: 413 EEGEFNEAIDNISYLLKDYKEVEM 436
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,128,336
Number of Sequences: 1657284
Number of extensions: 7394670
Number of successful extensions: 22387
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 21752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22379
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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