Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304D05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.31 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   2.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   3.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +2

Query: 89   NVESK*NNMRILTRYLNISCNGTVISNSI*FVTVFLVLGYFQQIVRGVVT 238
            N + K     ++ RY+  +   T+I+ +  FVT+  V+G F     G++T
Sbjct: 1202 NYKKKKFQRMVVARYVYYATIFTIITATSSFVTIHNVIGQFLGYFIGLIT 1251


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 205 LFSANSSRRRNAQVTLSVVRSDTSHGINSHQL 300
           LFSANS+++   ++ + + + D  + I S  L
Sbjct: 367 LFSANSTKKLIVKIRIDIDKEDERNEIISSAL 398


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 12  NRKVILNY*LNNAKKTPQRSVSVSLPMSNLNETT*EF*PD 131
           NRK  + Y       T  + VS+ +P+S L+    E+ PD
Sbjct: 367 NRKSDVKYTFEETGFTLDKGVSIMVPISGLHYDP-EYYPD 405


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 92  HWQRNAHRTLGSFLSI 45
           H  +N   TLG+ LSI
Sbjct: 278 HLDKNPENTLGTMLSI 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,276
Number of Sequences: 336
Number of extensions: 2086
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)