Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304D03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   3.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   3.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   3.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   3.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.7  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 38  SMRSKDVVDKVEHTPAPNMYSPEKS 112
           S  S D    V+ TP P  + PEKS
Sbjct: 417 STPSADGSKPVQTTPKPGQWVPEKS 441



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = +2

Query: 290 SPAPNVYAPEKSLHSLDNTPKFTMAGKGNNPKIEN 394
           +P P  + PEKS  +   T   +       P + N
Sbjct: 430 TPKPGQWVPEKSTSTTQRTTTVSTTEAPPAPAVSN 464


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = +2

Query: 170 KISETPAPNSYEPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSLDNTP 349
           ++++   P S   + A  +  +S  S       QIV R  S AP   A +    ++DN+ 
Sbjct: 147 QMNKVSTPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNSY 206

Query: 350 KF 355
           +F
Sbjct: 207 QF 208


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = +2

Query: 170 KISETPAPNSYEPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSLDNTP 349
           ++++   P S   + A  +  +S  S       QIV R  S AP   A +    ++DN+ 
Sbjct: 138 QMNKVSTPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNSY 197

Query: 350 KF 355
           +F
Sbjct: 198 QF 199


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 509 RCIAWLLPKCFLVEMNKLXMTHE 441
           +C A  L KC  V MNK  + HE
Sbjct: 91  QCRACRLKKCQNVGMNKDAVQHE 113


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 509 RCIAWLLPKCFLVEMNKLXMTHE 441
           +C A  L KC  V MNK  + HE
Sbjct: 91  QCRACRLKKCQNVGMNKDAVQHE 113


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 12/56 (21%), Positives = 24/56 (42%)
 Frame = +2

Query: 308 YAPEKSLHSLDNTPKFTMAGKGNNPKIENIPAPNSYNPDKADKLLHESSPAYSFRP 475
           Y  E++  +LD      +   G +   E  P P  Y+P++      ++   Y++ P
Sbjct: 374 YTFEETGFTLDKGVSIMVPISGLHYDPEYYPDPEKYDPERFSDENKKNLTPYTYLP 429


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 228 YMRVHRLIHFELKNRLFFA 284
           Y  ++ L+  +L+NR FFA
Sbjct: 173 YRNINLLLTEQLQNRRFFA 191


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 236 SSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHS 334
           +SPS   R     ++ S S  P V+  +  +HS
Sbjct: 167 TSPSGFNRASVSPLISSSSSPPGVFPVDAPMHS 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,892
Number of Sequences: 336
Number of extensions: 2893
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)