Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304D03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    32   0.29 
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    32   0.29 
Z81481-2|CAB03948.1|  593|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z96100-3|CAD60418.1|  893|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z96100-2|CAD60417.1|  912|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AY150817-1|AAN61051.1|  893|Caenorhabditis elegans ADR-1E protein.     28   4.7  
AY150816-1|AAN61050.1|  912|Caenorhabditis elegans ADR-1D protein.     28   4.7  
U41025-3|AAA82348.1|  244|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
 Frame = +2

Query: 176  SETPAPNS--YEPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSLDNTP 349
            SET  P +  YEP++ DKV+ +S+ S   + + +IV   +S       PE   H  ++  
Sbjct: 5234 SETQEPGATFYEPEEEDKVITDSADSSVVQDEPKIVFPVDS------TPE---HHSNDRE 5284

Query: 350  KFTMAGKGNNPKIENIP--APNSYNPDKADKLLH-ESSPAYSF-RPKNILGEAKR 502
            +F    K   P I      A  S    +    +H ++  A SF RP+++ GE ++
Sbjct: 5285 EFESIVKSEGPYIVESTDYAQTSAEEPRISSPVHSDAGDASSFKRPESVTGEDEK 5339


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
 Frame = +2

Query: 176  SETPAPNS--YEPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSLDNTP 349
            SET  P +  YEP++ DKV+ +S+ S   + + +IV   +S       PE   H  ++  
Sbjct: 5234 SETQEPGATFYEPEEEDKVITDSADSSVVQDEPKIVFPVDS------TPE---HHSNDRE 5284

Query: 350  KFTMAGKGNNPKIENIP--APNSYNPDKADKLLH-ESSPAYSF-RPKNILGEAKR 502
            +F    K   P I      A  S    +    +H ++  A SF RP+++ GE ++
Sbjct: 5285 EFESIVKSEGPYIVESTDYAQTSAEEPRISSPVHSDAGDASSFKRPESVTGEDEK 5339


>Z81481-2|CAB03948.1|  593|Caenorhabditis elegans Hypothetical
           protein C38D9.2 protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 18/78 (23%), Positives = 32/78 (41%)
 Frame = +2

Query: 62  DKVEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHESS 241
           +  E  P P   SP KS+H     P    +   G++  +     +S+E    +  L E S
Sbjct: 219 EPAELCPKPPPMSPTKSIHSNQSSP----IKSDGYSSENSNEQDSSFETTTEETPLPEKS 274

Query: 242 PSYTFRTKEQIVLRSESP 295
           P     T  + + + ++P
Sbjct: 275 PPKAVETPMKTIGKEKAP 292


>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
            C46C2.1b protein.
          Length = 1677

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +2

Query: 152  GKTGF-TKISETPAPNSYEPQKADKVL-HESSPSYTFRTKEQIVLRSESPAPNVYAPEKS 325
            GK G  TK++    PNS EP     V+  +SS +    TK +I +    P  +  + E +
Sbjct: 1020 GKKGVGTKLATVLDPNSTEPPTITAVMPKDSSAATASNTKPKIEIEKTPPTRDA-SQEPN 1078

Query: 326  LHSLDNTPKFTMAGKGNNPKIENIPAP 406
               + N  K  ++ + N   +++IP P
Sbjct: 1079 NVQVTNVRK--VSQESNAESVQSIPRP 1103


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
            C46C2.1a protein.
          Length = 1838

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +2

Query: 152  GKTGF-TKISETPAPNSYEPQKADKVL-HESSPSYTFRTKEQIVLRSESPAPNVYAPEKS 325
            GK G  TK++    PNS EP     V+  +SS +    TK +I +    P  +  + E +
Sbjct: 1020 GKKGVGTKLATVLDPNSTEPPTITAVMPKDSSAATASNTKPKIEIEKTPPTRDA-SQEPN 1078

Query: 326  LHSLDNTPKFTMAGKGNNPKIENIPAP 406
               + N  K  ++ + N   +++IP P
Sbjct: 1079 NVQVTNVRK--VSQESNAESVQSIPRP 1103


>Z96100-3|CAD60418.1|  893|Caenorhabditis elegans Hypothetical
           protein H15N14.1e protein.
          Length = 893

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 2/103 (1%)
 Frame = +2

Query: 203 EPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSL--DNTPKFTMAGKGN 376
           +P+ A  +   + P Y  + ++Q   +++  A N YA    + +         T   K N
Sbjct: 37  QPESAASLATHTFPQYVSQQQQQQQQQAQQQAQNTYAAMNPISTFMQQQQRAQTFPQKQN 96

Query: 377 NPKIENIPAPNSYNPDKADKLLHESSPAYSFRPKNILGEAKRY 505
            PK    P            LLHE     S     + G  K+Y
Sbjct: 97  KPKGPAAPKKFDSTGKSPAMLLHELFKDVSEEYTEVEGVPKKY 139


>Z96100-2|CAD60417.1|  912|Caenorhabditis elegans Hypothetical
           protein H15N14.1d protein.
          Length = 912

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 2/103 (1%)
 Frame = +2

Query: 203 EPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSL--DNTPKFTMAGKGN 376
           +P+ A  +   + P Y  + ++Q   +++  A N YA    + +         T   K N
Sbjct: 37  QPESAASLATHTFPQYVSQQQQQQQQQAQQQAQNTYAAMNPISTFMQQQQRAQTFPQKQN 96

Query: 377 NPKIENIPAPNSYNPDKADKLLHESSPAYSFRPKNILGEAKRY 505
            PK    P            LLHE     S     + G  K+Y
Sbjct: 97  KPKGPAAPKKFDSTGKSPAMLLHELFKDVSEEYTEVEGVPKKY 139


>AY150817-1|AAN61051.1|  893|Caenorhabditis elegans ADR-1E protein.
          Length = 893

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 2/103 (1%)
 Frame = +2

Query: 203 EPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSL--DNTPKFTMAGKGN 376
           +P+ A  +   + P Y  + ++Q   +++  A N YA    + +         T   K N
Sbjct: 37  QPESAASLATHTFPQYVSQQQQQQQQQAQQQAQNTYAAMNPISTFMQQQQRAQTFPQKQN 96

Query: 377 NPKIENIPAPNSYNPDKADKLLHESSPAYSFRPKNILGEAKRY 505
            PK    P            LLHE     S     + G  K+Y
Sbjct: 97  KPKGPAAPKKFDSTGKSPAMLLHELFKDVSEEYTEVEGVPKKY 139


>AY150816-1|AAN61050.1|  912|Caenorhabditis elegans ADR-1D protein.
          Length = 912

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 2/103 (1%)
 Frame = +2

Query: 203 EPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSL--DNTPKFTMAGKGN 376
           +P+ A  +   + P Y  + ++Q   +++  A N YA    + +         T   K N
Sbjct: 37  QPESAASLATHTFPQYVSQQQQQQQQQAQQQAQNTYAAMNPISTFMQQQQRAQTFPQKQN 96

Query: 377 NPKIENIPAPNSYNPDKADKLLHESSPAYSFRPKNILGEAKRY 505
            PK    P            LLHE     S     + G  K+Y
Sbjct: 97  KPKGPAAPKKFDSTGKSPAMLLHELFKDVSEEYTEVEGVPKKY 139


>U41025-3|AAA82348.1|  244|Caenorhabditis elegans Hypothetical
           protein C01C4.2 protein.
          Length = 244

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
 Frame = +2

Query: 191 PNSYEPQKADKVLHESSPSYTFRTKE--QIVLRSESPAPNVYAPEKSLHSLDNTPKFTMA 364
           P S   QKA+K+ ++  PS     K+  Q+  RS S   N       L +    P++ + 
Sbjct: 153 PRSEALQKAEKIFNDQMPSLPVEHKDIPQVFSRSPSNLYNSNNETPLLQNFQKLPEYVIT 212

Query: 365 GKGNNPKIENIPAPN 409
                 +I NI + N
Sbjct: 213 ECLEKSRILNIGSLN 227


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
           protein F40H6.5 protein.
          Length = 1288

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 23/75 (30%), Positives = 31/75 (41%)
 Frame = +2

Query: 260 TKEQIVLRSESPAPNVYAPEKSLHSLDNTPKFTMAGKGNNPKIENIPAPNSYNPDKADKL 439
           T +  V+ S S  P V  P  + +SL ++P        NNP I     P+S +  K    
Sbjct: 506 TSDSSVIVSSSKNPAVSNPFITTYSLPSSP--------NNPFISITTTPDSASSQKISTT 557

Query: 440 LHESSPAYSFRPKNI 484
              S  AYS  P  I
Sbjct: 558 TAISHSAYSASPSTI 572


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = +2

Query: 161 GFTKISETPAPNSYEPQKA--DKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHS 334
           G    + +P+P+S  P  +    +  E SPS T  +  Q  L +  P+PN   P +S  S
Sbjct: 469 GTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTT--PSPN---PSQSTSS 523

Query: 335 LDNTPKFTMAGKGNNPKIENIPAPNS 412
           L+++        G+       P+ +S
Sbjct: 524 LESSTSGATTSSGSAGTTMTSPSQSS 549


>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
           protein K06A9.1a protein.
          Length = 1032

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = +2

Query: 161 GFTKISETPAPNSYEPQKA--DKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHS 334
           G    + +P+P+S  P  +    +  E SPS T  +  Q  L +  P+PN   P +S  S
Sbjct: 676 GTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTT--PSPN---PSQSTSS 730

Query: 335 LDNTPKFTMAGKGNNPKIENIPAPNS 412
           L+++        G+       P+ +S
Sbjct: 731 LESSTSGATTSSGSAGTTMTSPSQSS 756


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
           protein K06A9.1b protein.
          Length = 2232

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = +2

Query: 161 GFTKISETPAPNSYEPQKA--DKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHS 334
           G    + +P+P+S  P  +    +  E SPS T  +  Q  L +  P+PN   P +S  S
Sbjct: 676 GTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTT--PSPN---PSQSTSS 730

Query: 335 LDNTPKFTMAGKGNNPKIENIPAPNS 412
           L+++        G+       P+ +S
Sbjct: 731 LESSTSGATTSSGSAGTTMTSPSQSS 756


>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
           protein F52G3.1 protein.
          Length = 1172

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
 Frame = +2

Query: 44  RSKDVVD-KVEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKAD 220
           R K V + K  H PAP    P K   +   G K +   K    K    P PN        
Sbjct: 338 REKSVQEAKTSHPPAP--VKPPKEKKLRKEG-KSSKKEKDVKEKKQTVPPPNPGPAPAPA 394

Query: 221 KVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEK 322
            +  ++ P+    T  + VL +  P  NV+A  K
Sbjct: 395 PIAIDTPPASEKTTPAEEVLPAPPPQENVWAKRK 428


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,193,576
Number of Sequences: 27780
Number of extensions: 268906
Number of successful extensions: 810
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)