Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304D03f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 32 0.004
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 2.5
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 2.5
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 3.3
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 5.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 5.8
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 5.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.7
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 7.7
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 7.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 7.7
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 31.9 bits (69), Expect = 0.004
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 5 DRILHQSAPSF-SMRSKDVVDKVEHTPAPNMYS 100
DR LH ++PSF S S+D + TP+P MYS
Sbjct: 117 DRRLHDNSPSFLSDHSRDQEQNLYLTPSPQMYS 149
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.6 bits (46), Expect = 2.5
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 219 TKYYMRVHRLIHFELK---NRLFFAVNHRHRMFMLLRNL 326
TK+ + RL +F N +F +NH + FML +L
Sbjct: 210 TKHNVPEQRLNYFTEDVGLNHFYFMLNHNYPPFMLSNSL 248
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.6 bits (46), Expect = 2.5
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 219 TKYYMRVHRLIHFELK---NRLFFAVNHRHRMFMLLRNL 326
TK+ + RL +F N +F +NH + FML +L
Sbjct: 210 TKHNVPEQRLNYFTEDVGLNHFYFMLNHNYPPFMLSNSL 248
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 326 LHSLDNTPKFTMAGKGNNPKIEN 394
+H+L NT F G NP ++N
Sbjct: 332 IHTLGNTLVFLFDLIGRNPTVQN 354
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 155 KTGFTKISETPAPNSYEPQKADKVLHESSPSY 250
K+G + + P+ Y P+ +KV + P Y
Sbjct: 5 KSGILYLFDRPSEPVYVPKGDNKVAFDIPPDY 36
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 132 PPFNICIDFSGEYMLGAGVCSTLS 61
PP ++ I G+Y+L + TLS
Sbjct: 303 PPTSLAIPLLGKYLLFTMILVTLS 326
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.4 bits (43), Expect = 5.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 87 GAGVCSTLSTTSLDLIEKEGAL 22
GAG+ LS LD ++KE L
Sbjct: 488 GAGIVYHLSKAELDKMDKEKKL 509
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = -3
Query: 174 ILVNPVFPKIVYLGPPFNICIDFSGEYMLGAGVCSTLS 61
I ++ F +V + PP ++ + G+Y++ A + ++S
Sbjct: 284 ISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSIS 321
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = -3
Query: 174 ILVNPVFPKIVYLGPPFNICIDFSGEYMLGAGVCSTLS 61
I ++ F +V + PP ++ + G+Y++ A + ++S
Sbjct: 284 ISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSIS 321
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 132 PPFNICIDFSGEYMLGAGVCSTLS 61
PP ++ + G+Y+L V TLS
Sbjct: 290 PPTSLTVPLLGKYLLFTMVLVTLS 313
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 69 LNTPLRLTCILQK 107
L TP +TCILQ+
Sbjct: 572 LATPTTVTCILQR 584
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 69 LNTPLRLTCILQK 107
L TP +TCILQ+
Sbjct: 662 LATPTTVTCILQR 674
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,026
Number of Sequences: 438
Number of extensions: 3453
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -