Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304D03f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 36 0.012
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 33 0.088
At3g47210.1 68416.m05126 expressed protein contains Pfam profile... 31 0.36
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 31 0.47
At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 31 0.62
At5g56530.1 68418.m07055 expressed protein contains similarity t... 30 0.82
At3g55550.1 68416.m06168 lectin protein kinase, putative similar... 30 0.82
At3g54590.1 68416.m06040 proline-rich extensin-like family prote... 30 0.82
At4g30720.1 68417.m04354 expressed protein hypothetical protein ... 30 1.1
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 29 1.4
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 29 1.4
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 29 1.9
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 3.3
At3g59740.1 68416.m06665 receptor lectin kinase 3 (lecRK3) ident... 28 4.4
At3g59730.1 68416.m06664 receptor lectin kinase, putative simila... 28 4.4
At3g03130.1 68416.m00309 expressed protein ; expression supporte... 28 4.4
At3g58220.1 68416.m06491 meprin and TRAF homology domain-contain... 27 5.8
At3g54580.1 68416.m06039 proline-rich extensin-like family prote... 27 7.7
At1g58170.1 68414.m06599 disease resistance-responsive protein-r... 27 7.7
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 36.3 bits (80), Expect = 0.012
Identities = 22/84 (26%), Positives = 31/84 (36%)
Frame = +2
Query: 164 FTKISETPAPNSYEPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSLDN 343
+T +P P Y P P Y + + V S SP P VY P ++S
Sbjct: 22 YTSAQYSPTPTPYSPL----------PPYVYNSPPPYVYNSPSPPPYVYKPPPYIYSSPP 71
Query: 344 TPKFTMAGKGNNPKIENIPAPNSY 415
P + + P + N P P Y
Sbjct: 72 PPPYVYSSPPPPPYVYNSPPPPPY 95
Score = 32.3 bits (70), Expect = 0.20
Identities = 25/99 (25%), Positives = 34/99 (34%)
Frame = +2
Query: 59 VDKVEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHES 238
VD PAP +Y P P Y S PAP Y+P
Sbjct: 346 VDSYSPPPAPYVYKP----------PPYVYKPPPYVYNYSPPPAPYVYKPPPYVYSYSPP 395
Query: 239 SPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSLDNTPKF 355
Y ++ + S PAP VY P ++S + P +
Sbjct: 396 PAPYVYKPPPYVYSYSPPPAPYVYKPPPYVYSSPSPPPY 434
Score = 29.5 bits (63), Expect = 1.4
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Frame = +2
Query: 80 PAPNMYS---PEKSMHMLNGGPKYTILGKTGFTKISETPAP----NSYEPQKADKVLHES 238
P P +YS P ++ P Y + ++P P +SY P A V
Sbjct: 302 PPPYVYSSPPPPPYVYKSPPPPPYVYTSPPPPPYVYKSPPPPPYVDSYSPPPAPYVY--K 359
Query: 239 SPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSLDNTP 349
P Y ++ + S PAP VY P ++S P
Sbjct: 360 PPPYVYKPPPYVYNYSPPPAPYVYKPPPYVYSYSPPP 396
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 33.5 bits (73), Expect = 0.088
Identities = 29/131 (22%), Positives = 47/131 (35%)
Frame = +2
Query: 74 HTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHESSPSYT 253
H P +YSP ++ P T + + P P P K V +P Y+
Sbjct: 206 HKPPTPIYSPPIKPPPVHKPPTPTYSPPVKPPPVHKPPTPIYSPPIKPPPVHKPPTPIYS 265
Query: 254 FRTKEQIVLRSESPAPNVYAPEKSLHSLDNTPKFTMAGKGNNPKIENIPAPNSYNPDKAD 433
K V ++P +Y+P + P T + +P ++ P P P K
Sbjct: 266 PPVKPPPV---QTPPTPIYSPPVKPPPVHKPPTPTYSPPVKSPPVQKPPTPTYSPPIKPP 322
Query: 434 KLLHESSPAYS 466
+ +P YS
Sbjct: 323 PVQKPPTPTYS 333
Score = 29.5 bits (63), Expect = 1.4
Identities = 29/131 (22%), Positives = 44/131 (33%)
Frame = +2
Query: 74 HTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHESSPSYT 253
H P YSP + P T + + P P +Y P + +P Y+
Sbjct: 291 HKPPTPTYSPPVKSPPVQKPPTPTYSPPIKPPPVQKPPTP-TYSPPIKPPPVKPPTPIYS 349
Query: 254 FRTKEQIVLRSESPAPNVYAPEKSLHSLDNTPKFTMAGKGNNPKIENIPAPNSYNPDKAD 433
K V + +P +Y+P + P + P I+ P P P K
Sbjct: 350 PPVKPPPVHKPPTP---IYSPPVKPPPVHKPPTPIYSPPVKPPPIQKPPTPTYSPPIKPP 406
Query: 434 KLLHESSPAYS 466
L +P YS
Sbjct: 407 PLQKPPTPTYS 417
>At3g47210.1 68416.m05126 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 474
Score = 31.5 bits (68), Expect = 0.36
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 311 APEKSLHSLDNTPKFTMAGKGNNPKIENIPAPNSYNPDKADKLLHESSPAYSFRPKNIL 487
+P S + +D T GK ++P + + P P+ Y +K +K SSP SF K I+
Sbjct: 13 SPPPSFYMVDKT------GKLSSPSLPSSPPPSYYMGEKTEKYSSPSSPPPSFYRKYII 65
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 31.1 bits (67), Expect = 0.47
Identities = 24/91 (26%), Positives = 36/91 (39%)
Frame = +2
Query: 134 PKYTILGKTGFTKISETPAPNSYEPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYA 313
PK+ + K K+ E P P E K ++ P K ++ E P P++
Sbjct: 112 PKFPEIPKPELPKMPEIPKP---ELPKVPEIQKPELPKMPEIPKPELPKFPEIPKPDL-- 166
Query: 314 PEKSLHSLDNTPKFTMAGKGNNPKIENIPAP 406
P+ +S PK K PK+ IP P
Sbjct: 167 PKFPENSKPEVPKLMETEKPEAPKVPEIPKP 197
>At3g28550.1 68416.m03565 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1018
Score = 30.7 bits (66), Expect = 0.62
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +2
Query: 68 VEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHESSPS 247
V +P P YSP +H + P Y + +P+P ++ S P
Sbjct: 685 VYSSPPPPYYSPSPKVHYKSPPPPYVY---SSPPPPYYSPSPKVVYKSPPPPYVYSSPPP 741
Query: 248 YTFRTKEQIVLRSESPAPNVY-APEKSLHSLDNTPKFTMAGKGNNPKIENIPAPNSYNPD 424
+ ++V +S P P VY +P +S +PK P + + P P Y+P
Sbjct: 742 PYYSPSPKVVYKS-PPPPYVYSSPPPPYYS--PSPKVVYKSP-PPPYVYSSPPPPYYSP- 796
Query: 425 KADKLLHESSP 457
+ K++++S P
Sbjct: 797 -SPKVVYKSPP 806
>At5g56530.1 68418.m07055 expressed protein contains similarity to
carboxyl-terminal proteinase contains Pfam profile
PF03080: Arabidopsis proteins of unknown function
Length = 420
Score = 30.3 bits (65), Expect = 0.82
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +2
Query: 5 DRILHQSAPSFSMRSKDVVDKVEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISET 184
+R+ + S D++D V + P P H + GP YT G +K+SE
Sbjct: 47 NRLNKPAVKSIQSPDGDIIDCVHISKQPAFDHPFLKDHKIQMGPSYTPESLFGESKVSEK 106
Query: 185 P 187
P
Sbjct: 107 P 107
>At3g55550.1 68416.m06168 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 684
Score = 30.3 bits (65), Expect = 0.82
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 41 MRSKDVVDKVEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKAD 220
++ +D V++ E P+ +S + NG +LG GF K+ + P S E
Sbjct: 316 VKDEDRVEEWELDFGPHRFSYRELKKATNGFGDKELLGSGGFGKVYKGKLPGSDEFVAVK 375
Query: 221 KVLHES 238
++ HES
Sbjct: 376 RISHES 381
>At3g54590.1 68416.m06040 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 743
Score = 30.3 bits (65), Expect = 0.82
Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 9/146 (6%)
Frame = +2
Query: 68 VEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHES-SP 244
V +P P YSP +H + P Y + +P P Y P + KV ++S P
Sbjct: 526 VYSSPPPPYYSPSPKVHYKSPPPPY----------VYSSPPPPYYSP--SPKVHYKSPPP 573
Query: 245 SYTFRTKEQIVLRSESPAPNVY---APEKSLHSLDNTPKFTMAGK-----GNNPKIENIP 400
Y + + SP+P VY P ++S P ++ + K P + + P
Sbjct: 574 PYVYNSPPPPYY---SPSPKVYYKSPPPPYVYSSPPPPYYSPSPKVYYKSPPPPYVYSSP 630
Query: 401 APNSYNPDKADKLLHESSPAYSFRPK 478
P Y+P P YS PK
Sbjct: 631 PPPYYSPSPKVYYKSPPPPYYSPSPK 656
Score = 28.7 bits (61), Expect = 2.5
Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 15/152 (9%)
Frame = +2
Query: 68 VEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHESSPS 247
V +P P YSP ++ + P Y + +P P Y P + KV ++S P
Sbjct: 601 VYSSPPPPYYSPSPKVYYKSPPPPY----------VYSSPPPPYYSP--SPKVYYKSPPP 648
Query: 248 YTFRTKEQIVLRSES--------PAPNVYAPEKSLHSLDNTPKFTMAGK-----GNNPKI 388
+ ++ +S P P Y+P + P + +PK+
Sbjct: 649 PYYSPSPKVYYKSPPHPHVCVCPPPPPCYSPSPKVVYKSPPPPYVYNSPPPPYYSPSPKV 708
Query: 389 --ENIPAPNSYNPDKADKLLHESSPAYSFRPK 478
++ P P+ Y+P + P+YS PK
Sbjct: 709 YYKSPPPPSYYSPSPKVEYKSPPPPSYSPSPK 740
>At4g30720.1 68417.m04354 expressed protein hypothetical protein -
Synechocystis sp. (strain PCC 6803),PIR2:S76076
Length = 749
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 170 KISETPAP-NSYEPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSLD 340
K+SETP P +SY LHE P++ + + E P + E LH ++
Sbjct: 615 KLSETPLPPSSYRLGVKSANLHELFPAHITEALRESISMFEKELPGFISEEALLHGVE 672
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 29.5 bits (63), Expect = 1.4
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Frame = +2
Query: 68 VEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHES-SP 244
V ++P P YSP ++ + P Y + +P P Y P + KV ++S P
Sbjct: 84 VYNSPPPPYYSPSPKVYYKSPPPPY----------VYSSPPPPYYSP--SPKVYYKSPPP 131
Query: 245 SYTFRTKEQIVLRSESPAPNVY---APEKSLHSLDNTPKFTMAGK-----GNNPKIENIP 400
Y + + + SP+P VY P ++S P ++ + K P + + P
Sbjct: 132 PYVYSSPPPLYY---SPSPKVYYKSPPPPYVYSSPPPPYYSPSPKVYYKSPPPPYVYSSP 188
Query: 401 APNSYNPDKADKLLHESSP 457
P Y+P + K+ ++S P
Sbjct: 189 PPPYYSP--SPKVYYKSPP 205
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 29.5 bits (63), Expect = 1.4
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 6/106 (5%)
Frame = +2
Query: 176 SETPAPNSYEPQKADKVLHESSPSYTFR-TKEQIVLRS-----ESPAPNVYAPEKSLHSL 337
+ T A Y P ++ S P YT+ V +S SP P Y+P S + +
Sbjct: 22 AHTSAQYPYSPPSPPPYVYSSPPPYTYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY-V 80
Query: 338 DNTPKFTMAGKGNNPKIENIPAPNSYNPDKADKLLHESSPAYSFRP 475
+P + + + P P P+ Y K+ ++ S P Y++ P
Sbjct: 81 YKSPPYVYS---SPPPYAYSPPPSPY-VYKSPPYVYSSPPPYAYSP 122
Score = 28.7 bits (61), Expect = 2.5
Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
Frame = +2
Query: 173 ISETPAPNSYEPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSLDN--- 343
+ +P P +Y P + V SP Y + + S P+P VY ++S
Sbjct: 39 VYSSPPPYTYSPPPSPYVY--KSPPYVYSSPPPYAY-SPPPSPYVYKSPPYVYSSPPPYA 95
Query: 344 -TPKFTMAGKGNNPKIENIPAPNSYNPDKADKLLHESSPAYSFRPKNILGEAKRYTWXP 517
+P + + P + + P P +Y+P + + YS P + Y + P
Sbjct: 96 YSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYVYSSPPPYAYSP 154
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 29.1 bits (62), Expect = 1.9
Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 9/146 (6%)
Frame = +2
Query: 68 VEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHESSPS 247
V ++P P YSP ++ + P Y + +P+P Y ++ S P
Sbjct: 403 VYNSPPPPYYSPSPKVYYKSPPPPYVY---SSPPPPYYSPSPKVYYKSPPPPYVYSSPPP 459
Query: 248 YTFRTKEQIVLRS-------ESPAPNVYAPEKSLHSLDNTPKFTMAGKGNNPKIENIPAP 406
+ ++ +S SP P Y+P ++ P + + + P P+P
Sbjct: 460 PYYSPSPKVYYKSPPPSYVYSSPPPPYYSPSPKVYYKSPPPSYVYS---SPPPPYYSPSP 516
Query: 407 NSYNPDKADKLLHESSPA--YSFRPK 478
Y ++ S P YS PK
Sbjct: 517 KVYYKSPPPPYVYSSPPPPYYSPSPK 542
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.3 bits (60), Expect = 3.3
Identities = 28/112 (25%), Positives = 41/112 (36%)
Frame = +2
Query: 77 TPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHESSPSYTF 256
+P+PN P ++ P+ ++ K + ETP K HES
Sbjct: 393 SPSPN---PPRTSEPKPSKPE-PVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEP 448
Query: 257 RTKEQIVLRSESPAPNVYAPEKSLHSLDNTPKFTMAGKGNNPKIENIPAPNS 412
K ++ + ESP P PE S PK + K P+I P S
Sbjct: 449 ENKHELPKQKESPKPQPSKPEDS--PKPEQPKPEESPKPEQPQIPEPTKPVS 498
>At3g59740.1 68416.m06665 receptor lectin kinase 3 (lecRK3)
identical to receptor lectin kinase 3 [Arabidopsis
thaliana] gi|4100060|gb|AAD00733
Length = 659
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/63 (23%), Positives = 31/63 (49%)
Frame = +2
Query: 50 KDVVDKVEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVL 229
K+V+++ E P+ +S ++ + G + +LGK GF ++ + P S +
Sbjct: 306 KEVLEEWEIQNGPHRFSYKELFNATKGFKEKQLLGKGGFGQVYKGMLPGSDAEIAVKRTS 365
Query: 230 HES 238
H+S
Sbjct: 366 HDS 368
>At3g59730.1 68416.m06664 receptor lectin kinase, putative similar
to receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains pfam domains PF00139:
Legume lectins beta domain and PF00069: Protein kinase
domain
Length = 523
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/63 (23%), Positives = 31/63 (49%)
Frame = +2
Query: 50 KDVVDKVEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVL 229
K+V+++ E P+ +S ++ + G + +LGK GF ++ + P S +
Sbjct: 308 KEVLEEWEIQCGPHRFSYKELFNATKGFKEKQLLGKGGFGQVYKGTLPGSDAEIAVKRTS 367
Query: 230 HES 238
H+S
Sbjct: 368 HDS 370
>At3g03130.1 68416.m00309 expressed protein ; expression supported
by MPSS
Length = 520
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 200 YEPQKADKVLHESSPSYTFRTKEQIVLRSESPAPNVYAPEKSLHSLDNTPKF-TMAGKGN 376
Y +++ ++L ES + +T + +SPA + + KS + +NT K M+G+
Sbjct: 164 YSTRRSVRLLEESMADLSLKTNVPVKKHEDSPAGSKFQA-KSDENSENTDKGGVMSGRDL 222
Query: 377 NPKIENIPAPNSYNPD 424
N +E + +PD
Sbjct: 223 NDSLEKEWDGSKNDPD 238
>At3g58220.1 68416.m06491 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 487
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 140 YTILGKTGFTKISETPAPNSYEPQKADKVLHESSPSYTFRTKE 268
Y + GK +ISE + YE + + ES Y + ++E
Sbjct: 173 YRVFGKVAAIEISEEGSKEGYEYESEEVYKKESEEGYKYESEE 215
>At3g54580.1 68416.m06039 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 951
Score = 27.1 bits (57), Expect = 7.7
Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 5/140 (3%)
Frame = +2
Query: 68 VEHTPAPNMYSPEKSMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHESSPS 247
V +P P YSP +H + P Y T P P Y + SP
Sbjct: 743 VYSSPPPPYYSPSPKVHYKSPPPPY--YAPTPKVHYKSPPPPYVY--SSPPPPYYSPSPK 798
Query: 248 YTFRTKEQIVLRSESPAPNVYAPEKSLHSLDNTPKFTMAGK-----GNNPKIENIPAPNS 412
+++ + S SP P Y+P + P + + +PK++ P
Sbjct: 799 VHYKSPPPPYVYS-SPPPPYYSPSPKVEYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPP 857
Query: 413 YNPDKADKLLHESSPAYSFR 472
Y + SP ++
Sbjct: 858 YVYSSPPPPYYSPSPKVDYK 877
>At1g58170.1 68414.m06599 disease resistance-responsive
protein-related / dirigent protein-related similar to
dirigent protein [Thuja plicata] gi|6694699|gb|AAF25360;
similar to pathogenesis-related protein [Pisum sativum]
gi|4585273|gb|AAD25355
Length = 185
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 110 SMHMLNGGPKYTILGKTGFTKISETPAPNSYEPQKADKVLHESSPSYTFRTKEQIVL 280
S+ ++N KYT G TGF + P + P+ + K++ + Y +KE+I L
Sbjct: 57 SVSIMNPPKKYT--GATGFGLMRMIDNPLTLTPKLSSKMVGRAQGFYAGTSKEEIGL 111
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,311,912
Number of Sequences: 28952
Number of extensions: 247200
Number of successful extensions: 698
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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