Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304D01f
         (330 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   0.63 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   0.83 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   0.83 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   0.83 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    20   5.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    20   5.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   7.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   7.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   7.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   7.7  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       20   7.7  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 0.63
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 166 GALVMSDTS*TVRPAFRSAVAVPPLAINCRPHSDRLFANESSP 38
           G +V   TS  V  A  ++    PLA  CR +   + A  SSP
Sbjct: 223 GRIVERFTSDRVHAALVTSPRARPLARTCRDNRLLVLAGTSSP 265


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 90  ASGGTATALRNAGLTVQDVSD 152
           +S  TATA+ +A +T+Q+VS+
Sbjct: 251 SSPTTATAIASATVTIQNVSN 271


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 90  ASGGTATALRNAGLTVQDVSD 152
           +S  TATA+ +A +T+Q+VS+
Sbjct: 199 SSPTTATAIASATVTIQNVSN 219


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 90  ASGGTATALRNAGLTVQDVSD 152
           +S  TATA+ +A +T+Q+VS+
Sbjct: 382 SSPTTATAIASATVTIQNVSN 402


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 316 GRTGYRLQTTTLIISYF 266
           GRT +R  ++T I +YF
Sbjct: 74  GRTTFRWLSSTSIYAYF 90


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 316 GRTGYRLQTTTLIISYF 266
           GRT +R  ++T I +YF
Sbjct: 74  GRTTFRWLSSTSIYAYF 90


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +2

Query: 122 RRPHSSRCVGHHESTGDARR 181
           +R H +  + HHE   D  +
Sbjct: 108 QRTHENMLLRHHEEVADGHQ 127


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 120 NAGLTVQDVSDITRAPEMLGGRVKTLH 200
           N  LT    +  T+A  ++ GR+ TLH
Sbjct: 556 NVQLTKLTKNCATKAQSVVLGRICTLH 582


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +2

Query: 122 RRPHSSRCVGHHESTGDARR 181
           +R H +  + HHE   D  +
Sbjct: 108 QRTHENMLLRHHEEVADGHQ 127


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +2

Query: 122 RRPHSSRCVGHHESTGDARR 181
           +R H +  + HHE   D  +
Sbjct: 108 QRTHENMLLRHHEEVADGHQ 127


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 306 GTGYRPPRLSSRTSD 262
           G  YR  R+  RTSD
Sbjct: 199 GRNYRKYRVEERTSD 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,488
Number of Sequences: 336
Number of extensions: 1451
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)