Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304D01f
         (330 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    24   0.55 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   2.2  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   5.1  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    20   8.9  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    20   8.9  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    20   8.9  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    20   8.9  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    20   8.9  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    20   8.9  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    20   8.9  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          20   8.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          20   8.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          20   8.9  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          20   8.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          20   8.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          20   8.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          20   8.9  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    20   8.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    20   8.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       20   8.9  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 0.55
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 42  LLSLAKSLSECGLQLIASGGTATALRNA 125
           LLS  +S+SEC L   +S  +  + RN+
Sbjct: 166 LLSKRRSVSECSLGTASSTSSTASSRNS 193


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 162 APEMLGGRVKTLHPAV 209
           AP MLGGR  T +  V
Sbjct: 340 APHMLGGRTDTTYRVV 355


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 216 GILARLSDSDQEDMKRQKYEMISVVVCNLYP 308
           G+L  L+++D       KY++I+    N  P
Sbjct: 14  GVLLLLTNADNSVHILSKYQLITSTTLNWLP 44


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 131


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 131


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 131


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 131


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 131


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 131


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 103 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 131


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 380


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 380


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 380


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 380


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 380


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 380


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 351 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 379


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 336 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 364


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 111 PWRYRHWQSTAGHIPTGSLLTRVAPFCPK 25
           P   R W    G +P    +  + PF P+
Sbjct: 352 PIMVRPWVPMRGQVPGSRHIGPLTPFPPR 380


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -3

Query: 244 SESDNRAKIPACTAGCKVFTRPPSISGALVMSDTS 140
           SES   + IP       + ++PP   G   +S  S
Sbjct: 359 SESSTGSSIPKLNLSTALMSQPPPNFGVSQVSPVS 393


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,314
Number of Sequences: 438
Number of extensions: 1769
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)