Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304C11f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-2870|AAG22438.1| 494|Drosophila melanogaster CG5559-PA... 31 1.3
AF538714-1|AAN15143.1| 1255|Drosophila melanogaster histone deac... 30 2.2
AF538713-1|AAN15142.1| 1203|Drosophila melanogaster histone deac... 30 2.2
AE014298-1873|AAN09318.1| 1181|Drosophila melanogaster CG1770-PB... 30 2.2
AE014298-1872|AAF48245.2| 1248|Drosophila melanogaster CG1770-PA... 30 2.2
AE014298-1871|AAX52490.1| 1199|Drosophila melanogaster CG1770-PC... 30 2.2
BT030411-1|ABO52831.1| 1076|Drosophila melanogaster IP09257p pro... 29 3.8
AE014296-2438|AAF49698.1| 296|Drosophila melanogaster CG13467-P... 29 3.8
AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p pro... 29 5.1
AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA ... 29 5.1
AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-P... 29 5.1
AY084097-1|AAL89835.1| 166|Drosophila melanogaster AT04449p pro... 28 6.7
AE014297-3554|AAN13997.1| 166|Drosophila melanogaster CG31128-P... 28 6.7
AE014134-2169|AAF53172.2| 171|Drosophila melanogaster CG17212-P... 28 8.8
AE014134-2168|AAO41183.1| 263|Drosophila melanogaster CG17212-P... 28 8.8
>AE014134-2870|AAG22438.1| 494|Drosophila melanogaster CG5559-PA
protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Frame = +1
Query: 235 GAIESFVLDNTQQNTRQDYSFYERSNVIASS--------KFATPKRVETIASINKRDINT 390
GA+ + +DN + R YS N+ +S F P V + A+I ++ NT
Sbjct: 69 GAV-GYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNT 127
Query: 391 TALPASPTRSIDSLSQRSLSY 453
T A PT SL +LSY
Sbjct: 128 TEESAPPTSPTGSLKSNTLSY 148
>AF538714-1|AAN15143.1| 1255|Drosophila melanogaster histone
deacetylase dHDAC4 isoformb protein.
Length = 1255
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 187 GATTSAPSPLGKSRPVGAIESFVLDNTQQNTRQDYSFYERSNV 315
G T SAP PLG GA++ V+ +N+ + YE V
Sbjct: 572 GRTQSAPLPLGHPMLTGAVQLNVVQTHYENSEAERQAYEHQVV 614
>AF538713-1|AAN15142.1| 1203|Drosophila melanogaster histone
deacetylase dHDAC4 isoforma protein.
Length = 1203
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 187 GATTSAPSPLGKSRPVGAIESFVLDNTQQNTRQDYSFYERSNV 315
G T SAP PLG GA++ V+ +N+ + YE V
Sbjct: 520 GRTQSAPLPLGHPMLTGAVQLNVVQTHYENSEAERQAYEHQVV 562
>AE014298-1873|AAN09318.1| 1181|Drosophila melanogaster CG1770-PB,
isoform B protein.
Length = 1181
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 187 GATTSAPSPLGKSRPVGAIESFVLDNTQQNTRQDYSFYERSNV 315
G T SAP PLG GA++ V+ +N+ + YE V
Sbjct: 498 GRTQSAPLPLGHPMLTGAVQLNVVQTHYENSEAERQAYEHQVV 540
>AE014298-1872|AAF48245.2| 1248|Drosophila melanogaster CG1770-PA,
isoform A protein.
Length = 1248
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 187 GATTSAPSPLGKSRPVGAIESFVLDNTQQNTRQDYSFYERSNV 315
G T SAP PLG GA++ V+ +N+ + YE V
Sbjct: 569 GRTQSAPLPLGHPMLTGAVQLNVVQTHYENSEAERQAYEHQVV 611
>AE014298-1871|AAX52490.1| 1199|Drosophila melanogaster CG1770-PC,
isoform C protein.
Length = 1199
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 187 GATTSAPSPLGKSRPVGAIESFVLDNTQQNTRQDYSFYERSNV 315
G T SAP PLG GA++ V+ +N+ + YE V
Sbjct: 520 GRTQSAPLPLGHPMLTGAVQLNVVQTHYENSEAERQAYEHQVV 562
>BT030411-1|ABO52831.1| 1076|Drosophila melanogaster IP09257p
protein.
Length = 1076
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 82 MDSSRRNNTDEQRCVLGLQDLKISKKVEDGTEQAQGATTSAPSPLGKSRPVGAIESFVLD 261
+ ++ R + DE+ Q ++V D +Q GATT A S R AI LD
Sbjct: 76 IQNTSRYDNDEEDLAASEQVAGGDRQVPDYWQQRNGATTGATS----GRQSRAISPGYLD 131
Query: 262 NTQQNTRQ 285
N +N+ Q
Sbjct: 132 NMSENSEQ 139
>AE014296-2438|AAF49698.1| 296|Drosophila melanogaster CG13467-PA
protein.
Length = 296
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 82 MDSSRRNNTDEQRCVLGLQDLKISKKVEDGTEQAQGATTSAPSPLGKSRPVGAIESFVLD 261
+ ++ R + DE+ Q ++V D +Q GATT A S R AI LD
Sbjct: 117 IQNTSRYDNDEEDLAASEQVAGGDRQVPDYWQQRNGATTGATS----GRQSRAISPGYLD 172
Query: 262 NTQQNTRQ 285
N +N+ Q
Sbjct: 173 NMSENSEQ 180
>AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p
protein.
Length = 1412
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 337 TPKRVETIASINKRDINTTALPASPTRSIDSLSQRSL 447
TPK E + ++ ++ LP S RS+DSLS L
Sbjct: 624 TPKISELLGKLSSGELEPVPLPNSGKRSLDSLSINEL 660
>AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA
stability factor protein.
Length = 1412
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 337 TPKRVETIASINKRDINTTALPASPTRSIDSLSQRSL 447
TPK E + ++ ++ LP S RS+DSLS L
Sbjct: 624 TPKISELLGKLSSGELEPVPLPNSGKRSLDSLSINEL 660
>AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-PA
protein.
Length = 1412
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 337 TPKRVETIASINKRDINTTALPASPTRSIDSLSQRSL 447
TPK E + ++ ++ LP S RS+DSLS L
Sbjct: 624 TPKISELLGKLSSGELEPVPLPNSGKRSLDSLSINEL 660
>AY084097-1|AAL89835.1| 166|Drosophila melanogaster AT04449p
protein.
Length = 166
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 316 SHLIVHKNYNLDECFAEYYRVRSSRLRLPDDFCLKGSEPKL 194
SH + K YNLDEC Y V L D+C S PKL
Sbjct: 68 SHSLAEKLYNLDECVPHKYNVTGPIL----DWCCLWS-PKL 103
>AE014297-3554|AAN13997.1| 166|Drosophila melanogaster CG31128-PA
protein.
Length = 166
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 316 SHLIVHKNYNLDECFAEYYRVRSSRLRLPDDFCLKGSEPKL 194
SH + K YNLDEC Y V L D+C S PKL
Sbjct: 68 SHSLAEKLYNLDECVPHKYNVTGPIL----DWCCLWS-PKL 103
>AE014134-2169|AAF53172.2| 171|Drosophila melanogaster CG17212-PA,
isoform A protein.
Length = 171
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = -2
Query: 355 FLPAWESQIWTKLSHLIVHKNY---NLDECF 272
F P W + W L+++++H +Y +L+ CF
Sbjct: 7 FKPEWNVEYWRLLTYMLLHSDYWHLSLNICF 37
>AE014134-2168|AAO41183.1| 263|Drosophila melanogaster CG17212-PB,
isoform B protein.
Length = 263
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = -2
Query: 355 FLPAWESQIWTKLSHLIVHKNY---NLDECF 272
F P W + W L+++++H +Y +L+ CF
Sbjct: 99 FKPEWNVEYWRLLTYMLLHSDYWHLSLNICF 129
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,785,177
Number of Sequences: 53049
Number of extensions: 386466
Number of successful extensions: 1127
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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