Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304C07f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VW32 Cluster: CG8756-PA, isoform A; n=26; Endopterygo...    88   1e-16
UniRef50_UPI0000D560D7 Cluster: PREDICTED: similar to CG15918-PA...    36   0.43 
UniRef50_Q95QQ8 Cluster: Lin-12 and glp-1 x-hybridizing protein ...    35   0.98 
UniRef50_Q9VR69 Cluster: CG32499-PA; n=7; Pancrustacea|Rep: CG32...    35   1.3  
UniRef50_Q9VJI8 Cluster: CG17905-PA; n=8; Endopterygota|Rep: CG1...    34   2.3  
UniRef50_Q4H3U0 Cluster: CCAAT enhancer binding protein alpha/ga...    34   2.3  
UniRef50_Q1DUK8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  

>UniRef50_Q9VW32 Cluster: CG8756-PA, isoform A; n=26;
           Endopterygota|Rep: CG8756-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 570

 Score = 88.2 bits (209), Expect = 1e-16
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = -3

Query: 519 ACPLTTRELPGETLRLFTCMECPNNYPWILDPQGEGYNV 403
           ACPLTTRELPGETLRLFTCMECPNNYPWILDP G+G++V
Sbjct: 532 ACPLTTRELPGETLRLFTCMECPNNYPWILDPTGDGFSV 570


>UniRef50_UPI0000D560D7 Cluster: PREDICTED: similar to CG15918-PA;
           n=2; Tribolium castaneum|Rep: PREDICTED: similar to
           CG15918-PA - Tribolium castaneum
          Length = 403

 Score = 36.3 bits (80), Expect = 0.43
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -3

Query: 516 CPLTTRELPGETLRLFTCMECPNNYPWILDPQGE 415
           CPL  R   G+   + +C+ECP  YPW+ +P G+
Sbjct: 345 CPL--RNTNGDLRYMMSCVECPEVYPWLGNPLGQ 376


>UniRef50_Q95QQ8 Cluster: Lin-12 and glp-1 x-hybridizing protein 1,
            isoform a; n=4; Bilateria|Rep: Lin-12 and glp-1
            x-hybridizing protein 1, isoform a - Caenorhabditis
            elegans
          Length = 1876

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 516  CPLTTRELPGETLRLFTCMECPNNYPWILDPQG 418
            C  +T  L  +  +  TC+ CP  YPW+ +P G
Sbjct: 1841 CLYSTPSLSSQEHQFLTCLPCPTMYPWLENPAG 1873


>UniRef50_Q9VR69 Cluster: CG32499-PA; n=7; Pancrustacea|Rep:
           CG32499-PA - Drosophila melanogaster (Fruit fly)
          Length = 486

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 486 ETLRLFTCMECPNNYPWILDPQGEG 412
           +T  + TC ECPN YPW+ D  G G
Sbjct: 440 DTRYMETCRECPNVYPWLGDAGGTG 464


>UniRef50_Q9VJI8 Cluster: CG17905-PA; n=8; Endopterygota|Rep:
           CG17905-PA - Drosophila melanogaster (Fruit fly)
          Length = 577

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 516 CPLTTRELPGETLRLFTCMECPNNYPWILDPQG 418
           C + +R L  +    +TCMECP  YPWI +  G
Sbjct: 544 CKVRSRVLQEDRF-FYTCMECPAQYPWIRNEFG 575


>UniRef50_Q4H3U0 Cluster: CCAAT enhancer binding protein alpha/gamma
           homolog; n=1; Ciona intestinalis|Rep: CCAAT enhancer
           binding protein alpha/gamma homolog - Ciona intestinalis
           (Transparent sea squirt)
          Length = 312

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -2

Query: 223 CSSSLSNLIPSPMMYNHYNVSKVSPL--QSKLHFYFE 119
           C+S+ S+  PSP+ YN YN   V+P   QS  H  F+
Sbjct: 100 CASACSSAAPSPVPYNFYNTPPVTPQRPQSPHHLQFD 136


>UniRef50_Q1DUK8 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 832

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 369 CTHVNKYSIILSIITLQHVILFCRRKLSVLSNIIFP 262
           C H   YS I  +I  QH    CR +L+  SN++ P
Sbjct: 594 CAHTFDYSCIEQVIERQHKCPLCRAELADTSNLVHP 629


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,810,498
Number of Sequences: 1657284
Number of extensions: 8781210
Number of successful extensions: 19010
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19010
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)