Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304C06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   0.71 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.7  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 65  YGWHIYVVDVYSF 27
           +GWH Y+ DV +F
Sbjct: 155 FGWHTYIFDVPNF 167


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = +3

Query: 228 KRLVVSWPRVVRAGVSESGFGFVASSCVNAVYW 326
           KR +V  P      V + GF  +     N  YW
Sbjct: 568 KRNLVDAPLKDTVTVPDGGFTIIRFKATNPGYW 600


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 65  YGWHIYVVDVY 33
           Y WH Y+ D++
Sbjct: 400 YRWHSYIDDIF 410


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 88  GRGSRCNYMGGTFML*MSIASSNHLTPGG 2
           G     NY      L  S+A+SNHL   G
Sbjct: 204 GMHQMANYSTDYSSLTHSLAASNHLLSSG 232


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 165 EVLPPVKSIILILFVFLCNNTK 230
           EVL P+ +++ I+ +F   NT+
Sbjct: 62  EVLKPIYALMRIVGIFPIKNTE 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,338
Number of Sequences: 336
Number of extensions: 2480
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)