Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304C06f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 65 4e-11
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 62 3e-10
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 61 6e-10
05_01_0103 + 686770-687017,687120-687270 58 4e-09
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 54 9e-08
03_06_0479 + 34217170-34217172,34217337-34217786 53 1e-07
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 52 3e-07
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 52 4e-07
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 44 1e-04
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 38 0.004
12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665 30 0.98
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 30 1.3
08_02_1170 + 24876197-24877070,24877563-24877606,24877805-248779... 29 2.3
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 29 3.0
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 27 6.9
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 27 6.9
02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237 27 6.9
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 27 9.1
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 27 9.1
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 27 9.1
07_03_1503 + 27017933-27018063,27019668-27019727,27019996-270201... 27 9.1
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 27 9.1
02_01_0695 - 5202091-5202498,5204103-5204588 27 9.1
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 64.9 bits (151), Expect = 4e-11
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = -2
Query: 514 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 344
+K K+F +SW PDT++V+ KMLY+SS D K+ L G+Q +QATD SE S + V+ +
Sbjct: 100 QKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSR 156
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 61.7 bits (143), Expect = 3e-10
Identities = 26/58 (44%), Positives = 41/58 (70%)
Frame = -2
Query: 511 KQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLR 338
K ++F + W PD AKV+ KMLY+SS + KK L G+Q +QATD E S +A++++++
Sbjct: 101 KSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDRVK 158
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = -2
Query: 514 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 344
+K K+F SW PDTA+ + KMLY+SS D ++ L G+Q IQATD SE S + + +
Sbjct: 87 QKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRAR 143
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 58.0 bits (134), Expect = 4e-09
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = -2
Query: 514 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAV 353
+K K+F ++W PDT++V+ KM+Y+SS D K+ L G+Q +QATD +E + +
Sbjct: 74 QKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVI 127
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 53.6 bits (123), Expect = 9e-08
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = -2
Query: 514 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQ 362
+K K+F ++W P T++++ KMLYS+S D +K+ L G IQATD +E Q
Sbjct: 87 QKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTETPQ 137
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = -2
Query: 511 KQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEE 347
+ K+F +SW P A V+ KM+Y+SS + KK L GVQ +QATD SE + + +++
Sbjct: 93 RSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKD 147
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = -2
Query: 514 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 344
+K K+F ++W P ++++ KMLY++S + ++ L GV IQATD SE E + E+
Sbjct: 87 QKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRER 143
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = -2
Query: 514 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQ 401
+K K+F +SW PDT+KV+ KMLY+SS D K+ L G+Q
Sbjct: 345 QKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQ 382
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = -2
Query: 514 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRA 335
+K K+F +SW P ++++ K +Y+ S + + L GV IQATD + E + +
Sbjct: 93 RKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRANR 152
Query: 334 T 332
T
Sbjct: 153 T 153
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 514 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRA 335
+K K+F +SW P + ++ K +Y+ + + L GV IQATD + E + +
Sbjct: 109 RKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRANR 168
Query: 334 T 332
T
Sbjct: 169 T 169
>12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665
Length = 366
Score = 30.3 bits (65), Expect = 0.98
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = +1
Query: 334 WRGASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXXXPWRCPGTTTS 495
WR +SLRRP LPR R L C S++ + S P+RCP TTTS
Sbjct: 225 WR-SSLRRP---LPR-RHL-CVSDIGIDSASISSFSPAHLRLDHPFRCPATTTS 272
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 77 AAPPFKPKRITASRQK*AGGGGTYP 151
A PP +PKR+ R+K AGG G P
Sbjct: 82 APPPPQPKRLQGGRKKGAGGHGKLP 106
>08_02_1170 +
24876197-24877070,24877563-24877606,24877805-24877900,
24877999-24878544
Length = 519
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 117 REAVMRFGLKGGAAVVTIWVAHLCCRCL*LPVTT 16
R +++ G+ G A+V++W+ + C + +PV T
Sbjct: 140 RPSLLLLGVTGTTALVSMWIHNTACTVMMMPVAT 173
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 428 SEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 312
+E R E P R G+ +GGRRR+A +R + I
Sbjct: 5 AESCGSRGGESPPPPRTRGASAGGRRRKAEAYREVLRRI 43
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = -1
Query: 434 RRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSCPDD 255
R +E V RS HPS R G + R RH S + Y R + +L D
Sbjct: 644 RAAEGVRHRSRTPHPSGRQRAHGDGRQGRSQTRHSSRCSCRYRSRRTRSPSSLTPRDQDG 703
Query: 254 T 252
T
Sbjct: 704 T 704
>05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 325 GDRWRGAS--LRRPPETLPRGRSLGCTSELRQGTFSERR 435
GD+W A + P PR + +S++++ FSERR
Sbjct: 971 GDQWMKADDVVEETPRMAPRAKRSAYSSDVQEVDFSERR 1009
>02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237
Length = 572
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 282 GFGFVASSCVNAVYWRSVARSFSS 353
GFG V VNAV+W S+AR SS
Sbjct: 257 GFGIVFGG-VNAVFWSSLARVSSS 279
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 439 SFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 341
S+DALKKS+ G+ + AT++ E E L
Sbjct: 236 SWDALKKSINGLVNKVNATNIKNIVPELFAENL 268
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 356 RRREAPRHRSPINSIYTRARDETEPALRHSCPDD 255
R R A R RSP +R + P+ RH C D
Sbjct: 358 RHRRAMRSRSPSKRRRHGSRGRSPPSSRHGCAKD 391
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -2
Query: 514 KKQKLFLMSWCPDTAKVKKKMLYSSSFD 431
+ ++FL++ P +V +KM++ S+FD
Sbjct: 559 RNSRVFLVTMSPTHTRVDRKMMFHSNFD 586
>07_03_1503 + 27017933-27018063,27019668-27019727,27019996-27020101,
27020254-27020325,27021008-27021061,27021707-27021856,
27022206-27022547,27022651-27024684,27024706-27024947,
27025658-27026235,27026329-27028183,27028533-27028851,
27028980-27029417
Length = 2126
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/80 (25%), Positives = 32/80 (40%)
Frame = -1
Query: 470 QGQEEDVVL*LVRRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDE 291
Q EED+ VR+ K+ S + P+ +P+ S GR + + +S +R
Sbjct: 846 QSDEEDIWW--VRKGTKLH-ESLKAEPAQKPIKQNSRGRAKVVRKTQSLAQLASSRIEGS 902
Query: 290 TEPALRHSCPDDTRPRHH*P 231
+ H C HH P
Sbjct: 903 QGASTSHLCESKVGCSHHKP 922
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 484 CPDTAKVKKKMLYSSSFDALKKSLV---GVQKYIQATDLSEASQEAVEEKLR 338
C D A + +L +S DA K+L QK+IQATD +E ++E+ R
Sbjct: 1789 CAD-ASISTLILENSLVDARDKNLALFNECQKFIQATDSAEVLIAQLKEEAR 1839
>02_01_0695 - 5202091-5202498,5204103-5204588
Length = 297
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 86 PFKPKRITASRQK*AGGGGTYP 151
PF P + A++ K AGGGG P
Sbjct: 203 PFYPTKANAAQSKAAGGGGCRP 224
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,144,634
Number of Sequences: 37544
Number of extensions: 339065
Number of successful extensions: 1164
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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