Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304C05f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907 42 3e-04
06_03_0842 + 25307509-25308049,25308507-25308659,25308770-253089... 42 4e-04
02_01_0681 - 5059082-5059217,5059318-5059783,5059869-5060072,506... 41 5e-04
04_04_0819 - 28312667-28313219,28315157-28316430 41 7e-04
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 37 0.011
02_05_0264 + 27263562-27264830 36 0.015
01_05_0586 + 23443371-23444645 36 0.026
07_01_0248 - 1821340-1821996,1823619-1823761,1824239-1824453,182... 34 0.060
01_06_1541 - 38127014-38128022,38128116-38128209,38128302-381285... 33 0.11
02_05_0601 - 30278455-30278572,30280211-30280676,30280748-302809... 33 0.18
06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478 32 0.32
04_04_0338 + 24509698-24510042,24510373-24510490,24510539-245106... 31 0.56
12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551 30 0.98
12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660 30 0.98
11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360 30 0.98
09_04_0018 - 13826587-13827695,13827907-13827966,13828332-138283... 30 0.98
04_04_0126 + 22952577-22952871,22952912-22953519,22954125-229545... 30 1.3
06_03_0442 + 20837492-20837621,20841842-20842075,20842435-208425... 29 1.7
02_01_0365 + 2621302-2621711,2622442-2622620,2623381-2623496,262... 29 2.3
01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708 29 2.3
04_04_1451 + 33695734-33695806,33695946-33696179,33696341-336964... 29 3.0
02_01_0018 + 119890-120238,120331-120424,120518-121529 29 3.0
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367... 28 4.0
06_03_0915 - 25929433-25930893 28 4.0
06_01_1136 + 9407282-9407663,9408075-9408227,9408336-9408539,940... 28 4.0
12_01_0599 - 4892146-4893552 28 5.2
04_04_0707 - 27435894-27436474,27437707-27438241 28 5.2
03_02_1025 + 13289146-13289586,13291882-13292087,13292174-132923... 28 5.2
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700... 28 5.2
11_06_0179 + 20952070-20955228 27 6.9
06_03_1508 - 30653967-30654245,30654342-30654631,30654773-306548... 27 6.9
03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559 27 9.1
02_05_1200 - 34922073-34922273,34922397-34922469,34922976-349230... 27 9.1
02_05_0272 - 27348537-27348728,27349035-27349192,27349292-273493... 27 9.1
01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559... 27 9.1
>07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907
Length = 424
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 323 SNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHXLYK 502
++ TL +++ + +GTG+L +P AF+ AG + G L +C +LV C L +
Sbjct: 29 TSAQTLGNVVVSIVGTGVLGLPYAFRTAGWVAGSLGVAAAGCATLYCMLLLVDCRDKLEE 88
Query: 503 K 505
K
Sbjct: 89 K 89
>06_03_0842 +
25307509-25308049,25308507-25308659,25308770-25308973,
25309056-25309521,25309614-25309746
Length = 498
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 362 LGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAH 490
+G GI+A+P + K G+I GIL ++VA++ +LV+C+H
Sbjct: 96 VGAGIMALPASIKMLGIIPGILMIIVVALLTEASIDMLVRCSH 138
>02_01_0681 -
5059082-5059217,5059318-5059783,5059869-5060072,
5060163-5060315,5060849-5061269
Length = 459
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 362 LGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAH 490
+G GI+A+P + K G+I GIL ++VA++ +LV+C+H
Sbjct: 56 VGAGIMALPASIKMLGIIPGILMIILVALLTEASIDMLVRCSH 98
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 40.7 bits (91), Expect = 7e-04
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 320 TSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHXL 496
+S T ++ A +G+G+L +P F G + G + + VA + HC +LV C L
Sbjct: 35 SSQPKTFANVFIAVVGSGVLGLPYTFSRTGWVAGSVLLLAVAALTFHCMMLLVACRRRL 93
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 335 TLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHXL 496
TL +++ + +GTG+L +P AF+ +G + G L +C +L+ C L
Sbjct: 21 TLGNIVVSIVGTGVLGLPYAFRTSGWLAGALGVAGAGAATFYCMLLLLDCRDKL 74
>02_05_0264 + 27263562-27264830
Length = 422
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 320 TSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHXL 496
+S T ++ A +G G+L +P F G G + + VA + +C +LV C L
Sbjct: 33 SSQPKTFANVFIAVVGAGVLGLPYTFSRTGWAAGSILLLSVAALTFYCMMLLVACRRRL 91
>01_05_0586 + 23443371-23444645
Length = 424
Score = 35.5 bits (78), Expect = 0.026
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 263 KDAESGDFDPFTER--KLDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTV 436
K+A+ D D + T S T +L A G G+L+MP A G ++ +LF V
Sbjct: 16 KEADFADDDDVEAQLTSYHTGASFSRTCLNLTNAVSGIGVLSMPYAVSQGGWLSLLLF-V 74
Query: 437 IVAVVCTHCSYILVKC 484
+V VC + ++ +C
Sbjct: 75 LVGAVCYYTGTLIERC 90
>07_01_0248 -
1821340-1821996,1823619-1823761,1824239-1824453,
1825911-1826049,1826152-1826385,1826504-1826624
Length = 502
Score = 34.3 bits (75), Expect = 0.060
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +2
Query: 215 PDEKNKEKIVSKYNMTKDAESG--DFDPFTERKLDTPTSNMDTLT-HLLKASLGTGILAM 385
P EK + +N+ AESG D + + T + T + H++ A +G+G+L++
Sbjct: 6 PQEKVATTTTAAFNL---AESGYADRPDLDDDGREKRTGTLVTASAHIITAVIGSGVLSL 62
Query: 386 PKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
A G + G V +V+ CS +L C
Sbjct: 63 AWAIAQLGWVIGPAVLVAFSVITWFCSSLLADC 95
>01_06_1541 -
38127014-38128022,38128116-38128209,38128302-38128535,
38128643-38128744,38130893-38130956
Length = 500
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 341 THLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
TH + A +G+G+LA+P + G + G + V+ A + + + +L C
Sbjct: 63 THAITAVIGSGVLALPWSVAQMGWVLGPIALVVCAYITYYTAVLLCDC 110
>02_05_0601 -
30278455-30278572,30280211-30280676,30280748-30280951,
30281065-30281220,30281336-30281738
Length = 448
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 362 LGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVK 481
+G GI+A+P K GL+ G++ ++ AV+ +LV+
Sbjct: 50 VGAGIMALPATMKVLGLVPGLILVMLAAVLTDASIELLVR 89
>06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478
Length = 393
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 359 SLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
S G GIL+MP A G ++ +F + +A +C + +L +C
Sbjct: 4 SQGVGILSMPYALSQGGWLSLAIF-ITIAAICFYTGILLQRC 44
>04_04_0338 +
24509698-24510042,24510373-24510490,24510539-24510642,
24510823-24511491
Length = 411
Score = 31.1 bits (67), Expect = 0.56
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 344 HLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
H++ A +G+G+L++ G + G ++ V CS +LV+C
Sbjct: 42 HIITAVIGSGVLSLAWGVAQLGWVAGPAVMLLFGAVIYCCSVLLVEC 88
>12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551
Length = 475
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 344 HLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
H++ A +G+G+L++ A G + G ++ A V + S +L +C
Sbjct: 44 HIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAEC 90
>12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660
Length = 475
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 344 HLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
H++ A +G+G+L++ A G + G ++ A V + S +L +C
Sbjct: 44 HIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAEC 90
>11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360
Length = 445
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 344 HLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
H++ A +G+G+L++ A G + G ++ A V + S +L +C
Sbjct: 39 HIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAEC 85
>09_04_0018 -
13826587-13827695,13827907-13827966,13828332-13828368,
13830281-13830341,13831295-13831443
Length = 471
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 261 VMLYLLTIFSLFFSSGDINVSNSCGAGIAPFDSFTILQR*SIDFPV 124
V +L TI F +GD N SCG + + +LQ S D PV
Sbjct: 364 VKAFLRTISPRHFVNGDWNTGGSCGNTVPLSNGSEVLQDHSSDLPV 409
>04_04_0126 +
22952577-22952871,22952912-22953519,22954125-22954596,
22954882-22954955,22955559-22955937,22956659-22956711
Length = 626
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 359 SLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
S G G+L++P A G ++ +L + VA+VC + +L +C
Sbjct: 97 SSGVGLLSIPYALSEGGWLSLVLL-LAVAMVCCYTGLLLRRC 137
>06_03_0442 +
20837492-20837621,20841842-20842075,20842435-20842528,
20842653-20842870,20842956-20843095,20843231-20843878
Length = 487
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 320 TSNMDTLT-HLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
T N+ T + H++ A +G+G+L++ A G + G + ++ A++ + S +L C
Sbjct: 43 TGNVWTASAHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFALITYYTSGLLADC 98
>02_01_0365 +
2621302-2621711,2622442-2622620,2623381-2623496,
2623626-2623964,2624113-2624307,2624505-2624594,
2625288-2625518,2625632-2625952
Length = 626
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 131 KSIDQRCKMVNESNGAIPAPQELETFISPDEKNKE 235
K +D++ K +N P PQ+ ET +SP +K KE
Sbjct: 491 KGLDKKPKSINSP----PRPQDNETCLSPTDKTKE 521
>01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708
Length = 488
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 344 HLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
H++ A +G+G+L++ A G + G V+ ++V + S +L C
Sbjct: 51 HIITAVIGSGVLSLGWAIAQLGWVAGPAVMVLFSLVTYYTSSLLSDC 97
>04_04_1451 +
33695734-33695806,33695946-33696179,33696341-33696434,
33696532-33696749,33696859-33696992,33697098-33697325,
33697417-33697845
Length = 469
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 320 TSNMDT-LTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
T N+ T + H++ A +G G+LA+ + G + G + V A V +++L C
Sbjct: 24 TGNLWTCVAHIITAVIGCGVLALSWSVAQLGWVAGPIAMVCFAFVTYISAFLLSHC 79
>02_01_0018 + 119890-120238,120331-120424,120518-121529
Length = 484
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 341 THLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
+H++ A +G+G+L++ A G + G ++ A V S +L C
Sbjct: 46 SHIITAVIGSGVLSLAWAIAQLGWVVGPTVMLLFAAVIYFTSNLLADC 93
>08_02_0957 +
23033602-23034749,23035519-23035765,23036598-23036744,
23036849-23037076
Length = 589
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 291 GSKSPDSASFVMLYLLTIFSLFFSSGDINVSN 196
G SP +++ +MLY+ +SLF S D +V++
Sbjct: 180 GDDSPAASNDLMLYITNSYSLFISGDDDSVAS 211
>06_03_0915 - 25929433-25930893
Length = 486
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +2
Query: 344 HLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCA 487
+L + +G GI+A+P K G+ G++ +++ ++ +LV+ A
Sbjct: 82 NLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRFA 129
>06_01_1136 +
9407282-9407663,9408075-9408227,9408336-9408539,
9408709-9409174,9409434-9409575
Length = 448
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 362 LGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVK 481
+G GI+A+P K GL G++ ++ A++ +LV+
Sbjct: 43 VGAGIMALPATMKVLGLAPGLVAILLAALLTDASIELLVR 82
>12_01_0599 - 4892146-4893552
Length = 468
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 344 HLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKC 484
H++ A +G+G+L++P A G + G V+ V + + +C
Sbjct: 40 HIITAVIGSGVLSLPWATAQLGWVGGPAVMVVFGGVTYFTATLQAEC 86
>04_04_0707 - 27435894-27436474,27437707-27438241
Length = 371
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 410 LINGILFTVIVAVVCTHCSYILVKCAHXLYKKTKK 514
+IN +LFTV+ +V Y +V+C ++ ++
Sbjct: 5 VINAVLFTVLAVLVALVLGYFVVRCQRRQRRRRRR 39
>03_02_1025 +
13289146-13289586,13291882-13292087,13292174-13292323,
13292412-13292545,13292843-13292949,13293031-13293137,
13293581-13293686,13294098-13294217,13294318-13294474,
13295163-13295254,13295338-13295582,13295668-13296268,
13296362-13296457,13296541-13296794,13297622-13297715,
13299138-13299188
Length = 986
Score = 27.9 bits (59), Expect = 5.2
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 364 GYWNLSHAQSLQGSRIDQWNTLHGYRGR 447
G+WN++ + + G +D W +L+ R R
Sbjct: 410 GHWNIAEEKIINGGALDNWTSLNLSRMR 437
>02_04_0513 -
23569212-23569675,23569759-23569801,23569888-23570000,
23570099-23570158,23570472-23570541,23570887-23570951,
23571548-23571685,23571764-23573015
Length = 734
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 191 QELETFISPDEKNKEKIVSKYNMTKDAESGDFD 289
++L F+ DE+ +E+ S TKDAE G+ +
Sbjct: 702 EQLGLFMKADEEEEEEDPSSVPSTKDAEEGEIN 734
>11_06_0179 + 20952070-20955228
Length = 1052
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 137 IDQRCKMVNESNGAIPAPQELETFISPDEKNKEKIVSKYNMTKDAESGDFDPFTERKLDT 316
+D C + N+ + P+ LE++IS +K I+ ++T D+ S DP E+K +
Sbjct: 724 LDTAC-LPNDMDIIFPSVP-LESYISLGKKEDSTII---DLTNDSTSSRMDPGNEKKENL 778
Query: 317 PTSNM 331
P +++
Sbjct: 779 PEAHI 783
>06_03_1508 -
30653967-30654245,30654342-30654631,30654773-30654841,
30654854-30654921,30655016-30655492,30655578-30655874,
30655974-30656824,30656917-30656990,30657270-30657292,
30657709-30657772,30658098-30658370,30658511-30658587,
30658686-30658912
Length = 1022
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 195 SWKHLYLRMKRTKKRLLANIT*RKMRSQETLIRSPKGS 308
++K L L +K +KK+LL ++T + M + + P G+
Sbjct: 429 AFKDLTLTLKGSKKKLLRSVTGKLMPGRVAAVMGPSGA 466
>03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559
Length = 789
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/38 (26%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 179 IPAPQELETFISPDEKNKEKIVSKYNMTK-DAESGDFD 289
+P Q +E + PD+ N+E ++ + ++ + DA+ D +
Sbjct: 317 VPLDQAMEMEVHPDQANEEAVMEEVSVQEDDAQEADME 354
>02_05_1200 -
34922073-34922273,34922397-34922469,34922976-34923019,
34923107-34923183,34923433-34923529,34923668-34924062,
34926577-34926620,34926702-34926770,34926856-34926956,
34927689-34927856,34927940-34928141,34928269-34928708,
34928786-34928884,34929123-34929263
Length = 716
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 484 TFDKYIRAVSANDGHDNREEYSIDQSGC 401
T D YI + +G + E Y+ID SGC
Sbjct: 426 TSDLYINKSESPNGKLSSESYAIDTSGC 453
>02_05_0272 -
27348537-27348728,27349035-27349192,27349292-27349323,
27349420-27349514,27349614-27349687,27349800-27349878,
27350015-27350078,27350156-27350218,27350300-27350442,
27350566-27350703,27350792-27350913,27350993-27351158,
27351276-27351398,27351609-27351680,27351773-27351880,
27352481-27352597,27352727-27352865,27352974-27353080,
27353167-27353276,27353892-27354025,27354106-27354255,
27354329-27354549,27354647-27355318
Length = 1092
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 280 RL*SVHRKEVGHSYFEYGHSNTLIEGFP--GYWNLSHAQSLQGSRIDQWNTLH 432
RL SV + + + +Y S + P G WN+ + + + G R++ W ++
Sbjct: 573 RLASVEARVLPPPWLKYHDSGREKDVLPRIGQWNMMNKKMVNGGRVNNWTCIN 625
>01_06_0293 - 28254673-28254878,28255189-28255306,28255767-28255961,
28256701-28256800,28256887-28256972,28257078-28257239,
28257965-28258101,28258233-28258281,28258688-28258746,
28258862-28258896,28259384-28259433,28260173-28260332,
28260898-28260963,28261065-28261162,28261649-28261696,
28262114-28262242,28262667-28262769,28262858-28262954,
28263181-28263241,28263659-28263740,28263845-28263962,
28264039-28266325
Length = 1481
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 LNRHPLYYKTDK*PNLRFTGKSI 139
L + P+YYKTD+ P L F+ + +
Sbjct: 1385 LPKKPVYYKTDELPELWFSAEQV 1407
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,628,444
Number of Sequences: 37544
Number of extensions: 310136
Number of successful extensions: 759
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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