Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304C05f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 56 1e-08
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 54 5e-08
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 51 4e-07
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 49 2e-06
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 38 0.003
U80446-3|AAL77180.1| 889|Caenorhabditis elegans Nuclear pore co... 37 0.008
U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore co... 37 0.008
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 36 0.013
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 31 0.50
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 31 0.50
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 29 1.5
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 29 1.5
Z49132-8|CAA88987.1| 366|Caenorhabditis elegans Hypothetical pr... 29 2.7
U21308-12|AAB93315.2| 360|Caenorhabditis elegans Hypothetical p... 28 4.7
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 28 4.7
Z83316-1|CAB05896.1| 212|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81486-4|CAB03986.2| 430|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL032655-5|CAA21723.1| 360|Caenorhabditis elegans Hypothetical ... 27 8.1
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 56.4 bits (130), Expect = 1e-08
Identities = 22/49 (44%), Positives = 36/49 (73%)
Frame = +2
Query: 344 HLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAH 490
H++KA LGTG+L++P AFK +GL G++ TV++ ++C +C +V AH
Sbjct: 57 HMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICLICLYCMRQVVFAAH 105
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 54.4 bits (125), Expect = 5e-08
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +2
Query: 224 KNKEKIVSKYNMTKDAESGDFD-PFTERKLDTPTSNMDTLTHLLKASLGTGILAMPKAFK 400
+++ ++VSK++ ++A F ERK S+ L +L+K LG G ++P AFK
Sbjct: 45 QSEYQLVSKWDEAEEALGPQRKMSFIERK--EKISSKFALINLMKGMLGAGCFSVPLAFK 102
Query: 401 AAGLINGILFTVIVAVVCTHCSYILVKCAHXLYK 502
+G ++G++ V++ +C C LVKCA L K
Sbjct: 103 QSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSK 136
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 51.2 bits (117), Expect = 4e-07
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +2
Query: 323 SNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHXLYK 502
S+ L +L+K LG G ++P AFK +G ++G++ V++ +C C LVKCA L K
Sbjct: 22 SSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSK 81
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 293 FTERKLDTPTSNMD-TLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSY 469
F R D+ + D L H++K +GTG+L++P AFK +G+ G++ + ++C +C+
Sbjct: 29 FASRVRDSRSITADQALIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTR 88
Query: 470 ILVKCAHXL 496
L+ H +
Sbjct: 89 QLIFGQHYI 97
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 290 PFTERK-LDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCS 466
PF E K + ++ T+ + +GT +LAMP A + AGL+ GI+ + +A +C + +
Sbjct: 120 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 179
Query: 467 YILVK 481
YI+++
Sbjct: 180 YIVIE 184
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 290 PFTERK-LDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCS 466
PF E K + ++ T+ + +GT +LAMP A + AGL+ GI+ + +A +C + +
Sbjct: 154 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 213
Query: 467 YILVK 481
YI+++
Sbjct: 214 YIVIE 218
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 290 PFTERK-LDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCS 466
PF E K + ++ T+ + +GT +LAMP A + AGL+ GI+ + +A +C + +
Sbjct: 152 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 211
Query: 467 YILVK 481
YI+++
Sbjct: 212 YIVIE 216
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 362 LGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVK 481
+G G++AMP AFK +GL GIL + VAV + Y+L K
Sbjct: 58 VGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLLGK 97
>U80446-3|AAL77180.1| 889|Caenorhabditis elegans Nuclear pore
complex protein protein6, isoform b protein.
Length = 889
Score = 37.1 bits (82), Expect = 0.008
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +2
Query: 113 NLRFTGKSIDQRCKMVNESNGAIPAPQELETFISPDEKNKE-KIVSKYNMTKDAESGDFD 289
+L +GKS+ R ++ SN I Q ET +S DE+ + +++ Y +K++ES D
Sbjct: 364 DLAVSGKSVGMRVHILKVSNDQIQHLQMFETSMSVDERLVDLELIQNYFPSKESES--LD 421
Query: 290 PFTERKLDTP-TSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFT 433
+ +L P T+ + +L+ L K+S +M + A G +FT
Sbjct: 422 ETQDGELYNPLTAALFSLSALFKSSSAKKTYSMKRISFAIQWKKGRVFT 470
>U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore
complex protein protein6, isoform a protein.
Length = 1562
Score = 37.1 bits (82), Expect = 0.008
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +2
Query: 113 NLRFTGKSIDQRCKMVNESNGAIPAPQELETFISPDEKNKE-KIVSKYNMTKDAESGDFD 289
+L +GKS+ R ++ SN I Q ET +S DE+ + +++ Y +K++ES D
Sbjct: 364 DLAVSGKSVGMRVHILKVSNDQIQHLQMFETSMSVDERLVDLELIQNYFPSKESES--LD 421
Query: 290 PFTERKLDTP-TSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFT 433
+ +L P T+ + +L+ L K+S +M + A G +FT
Sbjct: 422 ETQDGELYNPLTAALFSLSALFKSSSAKKTYSMKRISFAIQWKKGRVFT 470
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 36.3 bits (80), Expect = 0.013
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 335 TLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVK 481
T ++ + G G++A+P A + G + G ++ AVVCT+ +L +
Sbjct: 16 TALFIVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTYTGILLAE 64
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 314 TPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHX 493
T S L + + +G G ++ +FK AGL G+ IV + + + +V C+
Sbjct: 61 TGISATSGLINFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQY 120
Query: 494 LYK 502
L K
Sbjct: 121 LAK 123
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.50
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Frame = +2
Query: 113 NLRFTGKSIDQRCKMVNESNGAIPAPQELETFISPDEKNKEKIVSKYNMTKDAESGDFDP 292
N S+D + +NE PQ E+ +P ++ + + + +++ + D +
Sbjct: 14 NKHVFSNSLDYWNQELNEVPSYQNQPQTGESGSNPPPHDRLEPIQESVVSEQPQKDDINK 73
Query: 293 FTERKLD------TPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVC 454
E K D P S + ++ A G I+ +P A K G + I V VA VC
Sbjct: 74 QEEAKDDGHGEASEPISALQAAWNVTNAIQGMFIVGLPIAVKVGGWWS-IGAMVGVAYVC 132
Query: 455 THCSYILVKCAHXLYKKTKKT 517
+L++C + K +KT
Sbjct: 133 YWTGVLLIECLYENGVKKRKT 153
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.50
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Frame = +2
Query: 113 NLRFTGKSIDQRCKMVNESNGAIPAPQELETFISPDEKNKEKIVSKYNMTKDAESGDFDP 292
N S+D + +NE PQ E+ +P ++ + + + +++ + D +
Sbjct: 14 NKHVFSNSLDYWNQELNEVPSYQNQPQTGESGSNPPPHDRLEPIQESVVSEQPQKDDINK 73
Query: 293 FTERKLD------TPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVC 454
E K D P S + ++ A G I+ +P A K G + I V VA VC
Sbjct: 74 QEEAKDDGHGEASEPISALQAAWNVTNAIQGMFIVGLPIAVKVGGWWS-IGAMVGVAYVC 132
Query: 455 THCSYILVKCAHXLYKKTKKT 517
+L++C + K +KT
Sbjct: 133 YWTGVLLIECLYENGVKKRKT 153
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +2
Query: 209 ISPDEKNKEKIVSKYNMTKDAESGDFDPFTERKLDTPTSNMDTLTH 346
++PD+ + + +++ N T ++ GD P T + T T++ D L +
Sbjct: 103 LNPDDGDGKSLLTDRNSTTSSDGGDPKPVTAKDPSTTTTDQDGLAN 148
>Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical
protein C03A3.2 protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 338 LTHLLKASLGTGILAMPKAFKAAGLINGI 424
L ++ +GTG LA+PKAF+ AG + I
Sbjct: 19 LLYVFNLIVGTGALALPKAFQTAGWLLSI 47
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +2
Query: 314 TPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHX 493
T S L + + +G G ++ +FK AGL G I+ + + + +V C+
Sbjct: 33 TGISATSGLINFVCGMMGPGCFSLAVSFKQAGLWGGFASVFIIGGLSLYSMHKIVNCSQF 92
Query: 494 LYKK 505
L +K
Sbjct: 93 LSEK 96
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 365 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYIL 475
G GI+A+P A A G++ VI+ V T+ +Y+L
Sbjct: 70 GGGIVALPTAIIQAEFWTGLIVCVILIGVVTYTAYVL 106
>Z49132-8|CAA88987.1| 366|Caenorhabditis elegans Hypothetical
protein ZK666.8 protein.
Length = 366
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 209 ISPDEKNKEKIVSKYNMTKDAESGDFDPFTERKLDTPTSNMDTLTHLLKAS-LGTGILAM 385
+S +E KE VSK + KD + + R L +PT + L + T ++ +
Sbjct: 1 MSKEESTKESSVSKRTVRKDQIVKPNNEKSARSLKSPTKQFSVVPRLKRPDPTSTPLMPI 60
Query: 386 PKAFKAAGLINGIL 427
+ F+ I GI+
Sbjct: 61 DEKFRKRWHIEGII 74
>U21308-12|AAB93315.2| 360|Caenorhabditis elegans Hypothetical
protein ZK1290.9 protein.
Length = 360
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 340 NTLIE-GFPGYWNLSHAQSLQGSRIDQWNTLHGYRGRRLHSLLVY 471
NT I GF G ++++Q G ++DQW + GY+ L+S V+
Sbjct: 124 NTCISIGF-GQGTITYSQVDNGCQVDQWKSSSGYKKIILNSFDVH 167
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 27.9 bits (59), Expect = 4.7
Identities = 8/37 (21%), Positives = 24/37 (64%)
Frame = +2
Query: 365 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYIL 475
G+G++A+P A ++ G + G + +++ ++ + + +L
Sbjct: 20 GSGLVALPSAMQSLGFMGGTITLIVMCLITYYTATLL 56
>Z83316-1|CAB05896.1| 212|Caenorhabditis elegans Hypothetical
protein B0379.1 protein.
Length = 212
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 188 PQELETFISPDEKNKEKIVSKYNMTKDAESGDFDPFTERKLDTPTSNMDTLTH 346
P++ E + D+K + + TK A P T R PT DTL H
Sbjct: 102 PRQSEWLLEKDKKYRVRGARNLIYTKSASDISLPPLTRRTFTVPT---DTLRH 151
>Z81486-4|CAB03986.2| 430|Caenorhabditis elegans Hypothetical
protein C53A5.5 protein.
Length = 430
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 270 ASFVMLYLLTIFSLFFSSGDINVSNSCGAGIA 175
A ++ ++T FS+ + GD+ V+ CG G+A
Sbjct: 242 ADYLWFEIITFFSIGY--GDVQVNTYCGRGLA 271
>U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical
protein T25B6.2 protein.
Length = 798
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 140 DQRCKMVNESNGAIPAPQELETFISPDEKNKEKIVSKYNMTKDAESGDFDPFT 298
DQ ++N G I + ++TF NK + K +A GDF+ FT
Sbjct: 461 DQTTLIINNFQGMIDSLNWMDTFSKNRAHNKSDSLVKNFGWPEAMFGDFNDFT 513
>AL032655-5|CAA21723.1| 360|Caenorhabditis elegans Hypothetical
protein Y6B3B.10 protein.
Length = 360
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 256 VIFANNLFFVLFIRRYKCFQLLWRWNSAI*FVHHFATL 143
VI+A F + F LWR +S + FVHHF L
Sbjct: 158 VIYAVQSAFYIHSIYATLFMDLWRKDSWLMFVHHFIAL 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,550,216
Number of Sequences: 27780
Number of extensions: 267432
Number of successful extensions: 728
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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