Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304C04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   0.82 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   3.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 275 KNLNQGGY*YVWNVIIPITKKNSKC 201
           +NLN G   Y++N   P+    SKC
Sbjct: 46  QNLNLGEIYYIYNPRYPLPYSGSKC 70


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 288 DQSFEKFESRWLLICMECYY 229
           DQ  E+FE   + I  +CYY
Sbjct: 306 DQLSERFEQLRIKILGDCYY 325


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 392 KYITYILIYQIFPTLVF 442
           KY+ +  IY+I+P   F
Sbjct: 155 KYMKFPAIYEIYPNYFF 171


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 392 KYITYILIYQIFPTLVF 442
           KY+ +  IY+I+P   F
Sbjct: 155 KYMKFPAIYEIYPNYFF 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,610
Number of Sequences: 438
Number of extensions: 2470
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)