Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304C03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 177 4e-45
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 108 2e-24
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 103 1e-22
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 97 7e-21
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 95 3e-20
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 92 3e-19
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 92 3e-19
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 91 3e-19
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 84 5e-17
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 84 5e-17
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 82 3e-16
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 82 3e-16
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 82 3e-16
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 82 3e-16
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 82 3e-16
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 82 3e-16
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 80 1e-15
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 79 1e-15
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 79 1e-15
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 79 2e-15
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 77 1e-14
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 69 2e-12
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 69 2e-12
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 68 5e-12
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 67 8e-12
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 67 8e-12
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 65 3e-11
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 62 3e-10
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 60 9e-10
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 59 2e-09
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 58 5e-09
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 55 3e-08
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 55 4e-08
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 54 6e-08
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 53 1e-07
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 53 1e-07
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 53 1e-07
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 50 8e-07
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 49 2e-06
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 48 5e-06
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 48 5e-06
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 48 5e-06
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 47 9e-06
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 47 9e-06
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 45 4e-05
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 44 7e-05
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 38 0.006
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 36 0.023
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 35 0.031
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 34 0.071
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 34 0.071
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 28 4.7
Z81533-6|CAB04339.1| 347|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 177 bits (431), Expect = 4e-45
Identities = 83/104 (79%), Positives = 96/104 (92%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q YHSLAPMYYRGAQ+AIVVYDITNQ++F +AKNWVKELQRQASP+IV+ALAGNK+D+A
Sbjct: 78 QERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVA 137
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLP 483
KR VE+EEA AYA++N LLFMETSAKT+MNVNDIF+AIA KLP
Sbjct: 138 NKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLP 181
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 108 bits (260), Expect = 2e-24
Identities = 49/103 (47%), Positives = 74/103 (71%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + S+ YYRGA A++VYDIT +DTF +W+++ ++ ++ ++VI L GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
A+R V+ EE +A+A E+GL+FMETSAKTA NV + F+ A ++
Sbjct: 125 ARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEI 167
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 103 bits (246), Expect = 1e-22
Identities = 48/103 (46%), Positives = 68/103 (66%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + ++ YYRGA IVVYDIT+Q+TF K W++E+ R A ++ L GNK DL
Sbjct: 70 QERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLT 129
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
AKR VE + AQ YA + G+ F+ETSAK++ NV FL +A+++
Sbjct: 130 AKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEI 172
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 99.5 bits (237), Expect = 1e-21
Identities = 45/103 (43%), Positives = 67/103 (65%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + ++ YYRGA A++VYDIT + T+ +W+ + + +P+ I L GNK+DL
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLE 129
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
+R V +EEA+A+A+ENGL F+E SAKT NV D FL A ++
Sbjct: 130 DQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQI 172
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 97.1 bits (231), Expect = 7e-21
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + SL YYR A A++VYDIT++++F ++W+ +LQR P IVI L GNKSDL
Sbjct: 65 QERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLE 124
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
A R V EE +A+A E GL+FME SAKT V + F+ A+++
Sbjct: 125 ADREVRKEEGEAFAREFGLIFMEISAKTNEYVEEAFVNSAHEI 167
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/103 (39%), Positives = 68/103 (66%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q YH+L P+YYRG+ ++V+DIT++ +F + KNWV E++ + I + GNK DL
Sbjct: 71 QEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLE 130
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
+R V ++A+AYA+ G L+METSA+ + ++D F ++ K+
Sbjct: 131 EERQVTRQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKM 173
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 93.1 bits (221), Expect = 1e-19
Identities = 46/105 (43%), Positives = 66/105 (62%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + S+ YYR A A++VYDIT + +F + W+ +L++ P +VI L GNKSDL
Sbjct: 65 QENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLK 124
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK 486
A R V EE +A+A +NGL FMETSAK +V F+ A+++ K
Sbjct: 125 AVRDVTTEEGEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEIYK 169
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/104 (41%), Positives = 63/104 (60%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + SL P Y R + A+VVYDITN ++F + WV +++ + ++I L GNK+DLA
Sbjct: 70 QERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLA 129
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLP 483
KR V E+ + A + ++F+ETSAK NV +F IA LP
Sbjct: 130 DKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALP 173
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/104 (40%), Positives = 63/104 (60%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + SL P Y R + A+VVYDITN ++F + W+ +++ + ++I L GNK+DL+
Sbjct: 69 QERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLS 128
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLP 483
KR V +E + A E ++F+ETSAK NV +F IA LP
Sbjct: 129 DKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALP 172
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 91.5 bits (217), Expect = 3e-19
Identities = 47/106 (44%), Positives = 63/106 (59%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q Y ++ YYRGA A++VYDI T+ + W+KEL+ A +IVI L GNKSDL
Sbjct: 70 QERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLR 129
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKS 489
R V +EA+ YA+ N L F+ETSA + NV F I ++ KS
Sbjct: 130 HLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKS 175
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 84.2 bits (199), Expect = 5e-17
Identities = 36/103 (34%), Positives = 60/103 (58%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + ++ YYRGA I+VYDITN+ +F KNW++ ++ A+ + + GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIE 126
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
+R V + + A E G F+ETSAK +N+++ F +A +
Sbjct: 127 ERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI 169
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 84.2 bits (199), Expect = 5e-17
Identities = 36/103 (34%), Positives = 60/103 (58%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + ++ YYRGA I+VYDITN+ +F KNW++ ++ A+ + + GNK D+
Sbjct: 67 QERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIE 126
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
+R V + + A E G F+ETSAK +N+++ F +A +
Sbjct: 127 ERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI 169
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/103 (34%), Positives = 60/103 (58%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q +H++ YYRGA ++VYDITN +F W++ + AS +V + GNK D++
Sbjct: 68 QERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMS 127
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
+R+V E + A ++G+ F ETSAK ++V+ F +A +
Sbjct: 128 DRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAI 170
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 81.8 bits (193), Expect = 3e-16
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Frame = +1
Query: 46 SSFTFTINDYICLSV*LMIISVSRRLREDLSPKKKFRTELQ*QGG---YHSLAPMYYRGA 216
+SF F D S + + + +++ K+ + ++ G Y ++ YYRGA
Sbjct: 36 TSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGA 95
Query: 217 QSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYAD 396
I++YDITN+++F ++W +++ + + + L GNK D+ ++R+V + + AD
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 397 ENGLLFMETSAKTAMNVNDIF 459
+ GL F ETSAK +NV +F
Sbjct: 156 QLGLEFFETSAKENINVKAVF 176
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 81.8 bits (193), Expect = 3e-16
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Frame = +1
Query: 46 SSFTFTINDYICLSV*LMIISVSRRLREDLSPKKKFRTELQ*QGG---YHSLAPMYYRGA 216
+SF F D S + + + +++ K+ + ++ G Y ++ YYRGA
Sbjct: 36 TSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGA 95
Query: 217 QSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYAD 396
I++YDITN+++F ++W +++ + + + L GNK D+ ++R+V + + AD
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 397 ENGLLFMETSAKTAMNVNDIF 459
+ GL F ETSAK +NV +F
Sbjct: 156 QLGLEFFETSAKENINVKAVF 176
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 81.8 bits (193), Expect = 3e-16
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Frame = +1
Query: 46 SSFTFTINDYICLSV*LMIISVSRRLREDLSPKKKFRTELQ*QGG---YHSLAPMYYRGA 216
+SF F D S + + + +++ K+ + ++ G Y ++ YYRGA
Sbjct: 36 TSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGA 95
Query: 217 QSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYAD 396
I++YDITN+++F ++W +++ + + + L GNK D+ ++R+V + + AD
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 397 ENGLLFMETSAKTAMNVNDIF 459
+ GL F ETSAK +NV +F
Sbjct: 156 QLGLEFFETSAKENINVKAVF 176
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 81.8 bits (193), Expect = 3e-16
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Frame = +1
Query: 46 SSFTFTINDYICLSV*LMIISVSRRLREDLSPKKKFRTELQ*QGG---YHSLAPMYYRGA 216
+SF F D S + + + +++ K+ + ++ G Y ++ YYRGA
Sbjct: 50 TSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGA 109
Query: 217 QSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYAD 396
I++YDITN+++F ++W +++ + + + L GNK D+ ++R+V + + AD
Sbjct: 110 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 169
Query: 397 ENGLLFMETSAKTAMNVNDIF 459
+ GL F ETSAK +NV +F
Sbjct: 170 QLGLEFFETSAKENINVKAVF 190
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 81.8 bits (193), Expect = 3e-16
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Frame = +1
Query: 46 SSFTFTINDYICLSV*LMIISVSRRLREDLSPKKKFRTELQ*QGG---YHSLAPMYYRGA 216
+SF F D S + + + +++ K+ + ++ G Y ++ YYRGA
Sbjct: 36 TSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGA 95
Query: 217 QSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYAD 396
I++YDITN+++F ++W +++ + + + L GNK D+ ++R+V + + AD
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 397 ENGLLFMETSAKTAMNVNDIF 459
+ GL F ETSAK +NV +F
Sbjct: 156 QLGLEFFETSAKENINVKAVF 176
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 79.8 bits (188), Expect = 1e-15
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQA---SPS-IVIALAGNK 339
Q + S+ YYR + + +YD TN+++F +NWVKE SPS V L G K
Sbjct: 77 QEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTK 136
Query: 340 SDLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
SD+ ++R V +EE + +A + + F+ETS++T NVN+ F IA ++
Sbjct: 137 SDMDSQRQVNYEEGEYFAKYHKMKFIETSSRTGDNVNEAFHMIAQEI 183
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 79.8 bits (188), Expect = 1e-15
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + ++ YYR A ++ YDIT + +FG + W+ ++ + A+P++V L G K DL
Sbjct: 69 QERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLE 128
Query: 352 AKRMVEFEEAQAYADENGLLFM-ETSAKTAMNVNDIFLAIANKLPK 486
+R +E EEA+ NG+ M ETSAK +NV++ FL +A L +
Sbjct: 129 DQRAIEAEEAEMLQRANGMFAMLETSAKGNVNVDNAFLELATILKR 174
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 79.4 bits (187), Expect = 1e-15
Identities = 38/105 (36%), Positives = 61/105 (58%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + S+ YYR A + ++VYDI N+ +F +NW+ +++ ++ + L GNK DL
Sbjct: 62 QERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL- 120
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK 486
R V +E + A+ + FMETSAKT NV+ FL +A ++ K
Sbjct: 121 -PRAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERMLK 164
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 79.4 bits (187), Expect = 1e-15
Identities = 38/105 (36%), Positives = 61/105 (58%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + S+ YYR A + ++VYDI N+ +F +NW+ +++ ++ + L GNK DL
Sbjct: 62 QERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL- 120
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK 486
R V +E + A+ + FMETSAKT NV+ FL +A ++ K
Sbjct: 121 -PRAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERMLK 164
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 79.0 bits (186), Expect = 2e-15
Identities = 42/98 (42%), Positives = 58/98 (59%)
Frame = +1
Query: 193 APMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEF 372
A YYRGA A++VYDI+ T+ + W+K L+ A+ IVI L GNKSDL+ V
Sbjct: 74 ASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS--HAVPT 131
Query: 373 EEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK 486
+EA+ YA+ N + F+ETSA NV F I ++ K
Sbjct: 132 DEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYK 169
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 78.6 bits (185), Expect = 3e-15
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Frame = +1
Query: 103 ISVSRRLREDLSPKKKFRTELQ*QGG---YHSLAPMYYRGAQSAIVVYDITNQDTFGRA- 270
+ V +L+ + K R EL G Y ++ YY A + VYD+TN+ +F
Sbjct: 39 LGVDFKLKTIKLGRDKIRLELWDTAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLE 98
Query: 271 KNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVN 450
K W+KE+++ A P+ V+ L GNK+D+ +R V+F+ A+ A G+ E SAKT +N
Sbjct: 99 KYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDRAEKLASRLGVSLYEVSAKTGINCE 158
Query: 451 DIF 459
+ F
Sbjct: 159 EAF 161
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 76.6 bits (180), Expect = 1e-14
Identities = 36/101 (35%), Positives = 56/101 (55%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + ++ YYRG +VVYD+TN ++FG K W++E++ S+ L GNK +
Sbjct: 69 QERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCD-SVQKVLVGNKCEEN 127
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIAN 474
+R+V +A+ YA + F ETSAK NV +F I +
Sbjct: 128 ERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMFTCITS 168
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 69.7 bits (163), Expect = 1e-12
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Frame = +1
Query: 187 SLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQA---SPSIVIALAGNKSDLAAK 357
S+ YYR + + VYD+T +++F W+KE ++ + L GNK D+
Sbjct: 165 SIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDVECT 224
Query: 358 RMVEFEEAQAYADENGLLFMETSAKTAM---NVNDIFLAIANKLPKSE 492
V +EAQ +AD N + ETSAK A +V IFL + +KL +S+
Sbjct: 225 NRVSTDEAQMFADRNNMALFETSAKLASEADHVESIFLTLLHKLQQSK 272
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 69.3 bits (162), Expect = 2e-12
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASP----SIVIALAGNK 339
Q + SL +YRGA ++ +D+TN +F +W E QASP L GNK
Sbjct: 68 QERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNK 127
Query: 340 SDLAAKRMVEFEEAQAYADENG-LLFMETSAKTAMNVNDIFLAIA 471
DL ++R V + AQ++ G + + E SAK A+NV FLAIA
Sbjct: 128 VDLESQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIA 172
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 68.9 bits (161), Expect = 2e-12
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSD-- 345
Q + SL Y+R A AI+VYD+ + +F R ++W++ ++ SI I L GNK D
Sbjct: 520 QERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMR 579
Query: 346 LAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
++ V + + A G+LFMETSA N+++ LA+ +L
Sbjct: 580 ISTPGSVAKTDGASMAAAMGVLFMETSALDGSNIDNAMLALTREL 624
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 68.9 bits (161), Expect = 2e-12
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQ-ASPSIVIALAGNKSDL 348
Q + +L P YYRGAQ I VYD+T++ +F + +W++E+ + +I+ + NK D+
Sbjct: 70 QERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDM 129
Query: 349 AAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
R+V EE +A + LF+E SAKT V F + K+
Sbjct: 130 -PNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKI 172
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +1
Query: 181 YHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDLAAK 357
+ S+ +Y + Q +VVY IT+Q TF +N +++ R + S ++ I L GNK DL+ +
Sbjct: 64 FSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCDLSHQ 123
Query: 358 RMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
R V EE A A+ F E SAK NVN F I ++
Sbjct: 124 RQVRSEEGLALAESWSCPFTECSAKNNQNVNVTFAEIVREM 164
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 66.9 bits (156), Expect = 8e-12
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQA---SPSIVIALAGNKS 342
Q + SL ++R A I+++DITN+ +F ++W+ +L+ A P I+I GNK+
Sbjct: 75 QERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIIC--GNKA 132
Query: 343 DLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNV 447
DL +R V A+ AD+ GL + ETSA T+ NV
Sbjct: 133 DLENRRQVSTARAKQLADQLGLPYFETSACTSTNV 167
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 66.9 bits (156), Expect = 8e-12
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQA---SPSIVIALAGNKS 342
Q + SL ++R A I+++DITN+ +F ++W+ +L+ A P I+I GNK+
Sbjct: 75 QERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIIC--GNKA 132
Query: 343 DLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNV 447
DL +R V A+ AD+ GL + ETSA T+ NV
Sbjct: 133 DLENRRQVSTARAKQLADQLGLPYFETSACTSTNV 167
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 65.3 bits (152), Expect = 3e-11
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + S+ YYR A + ++VYD++ Q +F W+ E++ A+ ++ L GNK D
Sbjct: 66 QERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKG 125
Query: 352 AKRMVEFEEAQAYADENGL-LFMETSAKTAMNVNDIFLAIANKL 480
+R V + ++D N F+ETSA A NV+ +F +A +L
Sbjct: 126 DEREVPERIGRDFSDVNQFDYFLETSALDATNVDQLFEQVATRL 169
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 64.5 bits (150), Expect = 4e-11
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQA-SPSIVIALAGNKSDL 348
Q + + PMY R A +A++VYD+T+++TF + W+K+L R + + + L GNK+DL
Sbjct: 115 QERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDL 174
Query: 349 AAKRMVEFEEAQAYADENGLLFMETS 426
KR V E +A A + F E S
Sbjct: 175 VEKREVTEAEGKAMAAKINAKFFELS 200
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 61.7 bits (143), Expect = 3e-10
Identities = 32/96 (33%), Positives = 51/96 (53%)
Frame = +1
Query: 202 YYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEA 381
YYR AQ ++V+ + TF K ++ + + L GNKSDLA R V+ EA
Sbjct: 71 YYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVDESEA 130
Query: 382 QAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKS 489
+A++ + + ETSA+ NV+++F A + KS
Sbjct: 131 HNFAEKLKIPYFETSARLNQNVSEVFEECAVLIQKS 166
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 60.1 bits (139), Expect = 9e-10
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + S+ Y+R A ++++D+T++ +F +NW+ ++ + V+ L GNK DL
Sbjct: 262 QERFRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDLF 321
Query: 352 AK---RMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSE 492
R + A+ A E + F ETSA T ++ +A L + E
Sbjct: 322 GSDIARSAVYRAAEKLAVEFKIPFFETSAYTGFGIDTCMRQMAENLQRRE 371
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 59.7 bits (138), Expect = 1e-09
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +1
Query: 181 YHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDLAAK 357
+ ++ +Y + Q ++VY IT Q TF + ++ R + + + + L GNK DL +
Sbjct: 64 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDLEDE 123
Query: 358 RMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
R+V ++ Q A + G F+ETSAK +NV+++F + ++
Sbjct: 124 RVVGKDQGQNLARQFGSAFLETSAKAKINVSEVFYDLVRQI 164
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 58.8 bits (136), Expect = 2e-09
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQ-ASPSIVIALAGNKSDL 348
Q + +L P YYRGAQ I VYD+T++ +F + +W++E+ + +I+ + NK D+
Sbjct: 43 QERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDM 102
Query: 349 AAK----------------RMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
K R+V EE +A + LF+E SAKT V F + K+
Sbjct: 103 VRKSRFCSIFGLKNNFQPNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKI 162
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 57.6 bits (133), Expect = 5e-09
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR--QASPSIVIALAGNKSD 345
Q Y ++ YYR + I V+ I + ++F + +++ R + S+ I L GNK D
Sbjct: 75 QEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGD 134
Query: 346 LAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK 486
+ +R+V E + A++ G ++ETSAK NV+ +F + ++ +
Sbjct: 135 MRDQRVVSAELCRQRAEQWGCHYVETSAKRRENVDKVFYDLMREMKR 181
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 55.2 bits (127), Expect = 3e-08
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSD 345
Q Y ++ YYRGA A++VYDI T+ + W+KEL+ A +IVI GNK D
Sbjct: 70 QERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +1
Query: 202 YYRGAQSAIVVYDITNQDTFGRAKNW---VKELQRQASPSIVIALAGNKSDLAAKRMVEF 372
Y GA +VYD+TN +F A +W VK+ + + + + L GNK+DL +R+V
Sbjct: 105 YLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVVSV 164
Query: 373 EEAQAYADENGLLFMETSAKTAMNV 447
E + +A N ++ SAKT V
Sbjct: 165 EAHKNFATSNDMMPTYVSAKTGDTV 189
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 54.0 bits (124), Expect = 6e-08
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNK 339
Q + ++ YYRGA I+VYDITN+ +F KNW++ ++ A+ + + GNK
Sbjct: 67 QERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDL 348
Q Y ++ Y R + ++V+ + +F N+ ++++R + S + + L GNK DL
Sbjct: 61 QEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL 120
Query: 349 AAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK 486
++ R V+F A G+ ++TSAKT M V++ F + ++ K
Sbjct: 121 SS-RSVDFRTVSETAKGYGIPNVDTSAKTRMGVDEAFYTLVREIRK 165
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDL 348
Q Y ++ Y R + ++V+ + +F N+ ++++R + S + + L GNK DL
Sbjct: 64 QEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL 123
Query: 349 AAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK 486
++ R V+F A G+ ++TSAKT M V++ F + ++ K
Sbjct: 124 SS-RSVDFRTVSETAKGYGIPNVDTSAKTRMGVDEAFYTLVREIRK 168
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 52.8 bits (121), Expect = 1e-07
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNK 339
Q +H++ YYRGA ++VYDITN +F W++ + AS +V + GNK
Sbjct: 68 QERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNK 123
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 50.4 bits (115), Expect = 8e-07
Identities = 34/103 (33%), Positives = 53/103 (51%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + L YY Q AI+++D+T + T+ NW ++L R +I I L GNK D+
Sbjct: 68 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLAR-VCENIPIVLCGNKVDV- 125
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
R V+ + + +N L + + SAK+ N FL +A KL
Sbjct: 126 KDRKVKAKTITFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 167
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 49.2 bits (112), Expect = 2e-06
Identities = 34/103 (33%), Positives = 52/103 (50%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLA 351
Q + L YY Q AI+++D+T + T+ NW +L R +I I L GNK D+
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDLAR-VCENIPIVLCGNKVDV- 59
Query: 352 AKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 480
R V+ + + +N L + + SAK+ N FL +A KL
Sbjct: 60 KDRKVKAKTITFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 101
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 47.6 bits (108), Expect = 5e-06
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDL 348
Q + ++ Y R ++V+ +T++++F K + + R + I L GNK+DL
Sbjct: 75 QEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADL 134
Query: 349 AAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK 486
+R V EA+ A + ++E SAK NV++ F I + K
Sbjct: 135 ENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVRK 180
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 47.6 bits (108), Expect = 5e-06
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDL 348
Q + ++ Y R ++V+ +T++++F K + + R + I L GNK+DL
Sbjct: 75 QEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADL 134
Query: 349 AAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK 486
+R V EA+ A + ++E SAK NV++ F I + K
Sbjct: 135 ENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVRK 180
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 47.6 bits (108), Expect = 5e-06
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDL 348
Q + ++ Y R ++V+ +T++++F K + + R + I L GNK+DL
Sbjct: 75 QEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADL 134
Query: 349 AAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPK 486
+R V EA+ A + ++E SAK NV++ F I + K
Sbjct: 135 ENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVRK 180
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 226 IVVYDITNQDTFGRAKNWVKELQRQ-ASPSIVIALAGNKSDLAAKRMVEFEEAQAYADEN 402
I+VY I ++ +F N +++ R SI I + GNK+DL+ +R+V EE + A +
Sbjct: 89 ILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELARQW 148
Query: 403 GLLFMETSAKTAMNVNDIF 459
F+E +A+ + V+++F
Sbjct: 149 DAKFVEITARESNRVHEVF 167
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 46.8 bits (106), Expect = 9e-06
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 226 IVVYDITNQDTFGRAK---NWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYAD 396
I++Y +TN+ +F +KE++ A I L GNK D +KR V Q A
Sbjct: 13 ILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSGQKVAT 72
Query: 397 ENGLLFMETSAKTAMNVNDIF 459
F+ETSAK N+ ++F
Sbjct: 73 NMECGFIETSAKNNENITELF 93
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +1
Query: 229 VVYDITNQDTFGRAKNWVKEL-QRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYADENG 405
+VY++ N+++F A + + L R+ + I L GNK DL +V E A +
Sbjct: 249 IVYNVDNRESFVCATDLLSRLLNRKIARGANIILIGNKIDLKRNTVVSKMEGACLAKVHK 308
Query: 406 LLFMETSAKTAMNVNDIFLAIANKL--PKSE 492
F+E SA+ +MN+++++ I +L PK+E
Sbjct: 309 CNFVEVSAQYSMNISELWTIILKQLQAPKAE 339
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +1
Query: 226 IVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYADENG 405
I++Y + ++ +F A K L+ + I L G+K D+ KR+V E Q A G
Sbjct: 293 IIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLARTLG 352
Query: 406 LLFMETSAKTAMNVNDIFLAIANKLPK 486
+ F+E S+K V + F + + + K
Sbjct: 353 IPFLEVSSKQNDCVFEAFEELVSLIQK 379
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKN-WVKELQRQASPSIVIALAGNKSDL 348
QG Y + + Y A +V + + ++ T ++ W+ E+++ A ++ I L G K+DL
Sbjct: 62 QGNYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKNDL 121
Query: 349 A----AKRMVEFEEAQAYADENGL-LFMETSAKTAMNVNDIF 459
++ V + A+ A E G F SA T + +F
Sbjct: 122 VDDADSRNTVTEDYAKRVAHEIGCHKFYSCSALTHKGLKRVF 163
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 35.5 bits (78), Expect = 0.023
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 187 SLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQ---ASPSIVIALAGNK 339
S+ YYR + + VYD+T +++F W+KE ++ + L GNK
Sbjct: 12 SIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNK 65
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 35.1 bits (77), Expect = 0.031
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +1
Query: 226 IVVYDITNQDTFGRAKNWVKELQRQASPSIV----IALAGNKSDLAAKRMVEFEEAQAYA 393
+VVYD+T+Q +F A+ ++ + R L GNK+DL R V E + A
Sbjct: 83 VVVYDVTSQLSFQYAEGILERISRHEHVLCPREHRTLLVGNKTDLERYRQVSETEGERLA 142
Query: 394 DENGLLFMETSA 429
++ F E SA
Sbjct: 143 SQHKAQFAECSA 154
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 33.9 bits (74), Expect = 0.071
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 226 IVVYDITNQDTFGRAKNWVKE--LQRQASP-SIVIALAGNKSDLAAKRMVEFEEAQAYAD 396
IV+Y++ N+ +F A ++ L +P + + L GNK DL +++ E ++ A
Sbjct: 248 IVMYNMDNRQSFIYATQILERITLANLNNPVPLQLFLIGNKCDLKRNQVISTNEGKSVAR 307
Query: 397 ENGLLFMETSAKTAMNVNDIFLAIANKL 480
F+E SA MN + + I +L
Sbjct: 308 TFKCDFLEVSALLGMNTEETWTTILKEL 335
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 33.9 bits (74), Expect = 0.071
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 172 QGGYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR-QASPSIVIALAGNKSDL 348
Q + ++ Y R ++V+ +T++++F K + + R + I L GNK+DL
Sbjct: 75 QEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADL 134
Query: 349 AAKRMVEFE 375
+R V FE
Sbjct: 135 ENERHVSFE 143
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 181 YHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKEL 291
+ A +++ GA AI+V+D+TN+ + W+ L
Sbjct: 79 HRQAAQVFFEGAVGAILVHDLTNKRSEENLATWLTML 115
>Z81533-6|CAB04339.1| 347|Caenorhabditis elegans Hypothetical
protein F36G9.9 protein.
Length = 347
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 241 YHILQ*QIGLLCSTSALSCDTLPVIVAPF 155
+H+L QI + S +L+ TLPVI +PF
Sbjct: 45 WHLLVFQIFSMISDFSLNVGTLPVIFSPF 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,354,973
Number of Sequences: 27780
Number of extensions: 194053
Number of successful extensions: 568
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -