Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304C01f
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    24   0.57 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   2.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   2.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   2.3  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   7.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   7.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   7.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   7.0  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 96  VQSLIYLR*IHLLFSFEVIFIKIPEI 19
           VQ+L  +R  ++LFS E + I+IP++
Sbjct: 177 VQTLAAIRINNILFSAEGVEIRIPDV 202


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +2

Query: 350 KTRPQPALVAVGIPIYAWK 406
           K+RP PA +   + + +W+
Sbjct: 224 KSRPSPATIISNVTVISWQ 242


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +2

Query: 350 KTRPQPALVAVGIPIYAWK 406
           K+RP PA +   + + +W+
Sbjct: 224 KSRPSPATIISNVTVISWQ 242


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +2

Query: 350 KTRPQPALVAVGIPIYAWK 406
           K+RP PA +   + + +W+
Sbjct: 544 KSRPSPATIISNVTVISWQ 562


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 440 QYTKYTRHQFL 408
           Q T YTRHQ L
Sbjct: 236 QRTAYTRHQIL 246


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 440 QYTKYTRHQFL 408
           Q T YTRHQ L
Sbjct: 236 QRTAYTRHQIL 246


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 392 IYAWKGETDDEYIWC 436
           ++ W  ETDD + +C
Sbjct: 347 VFIWSIETDDMHEFC 361


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 440 QYTKYTRHQFL 408
           Q T YTRHQ L
Sbjct: 236 QRTAYTRHQIL 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,295
Number of Sequences: 336
Number of extensions: 2441
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)