Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304B11f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    27   0.13 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   3.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   3.8  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   5.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   5.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.7  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.7  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.7  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 211 CVMLHSSSPPPFRHSAQP 158
           C  L SS PPP++ SAQP
Sbjct: 323 CWSLTSSPPPPYQISAQP 340


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 444 HPQLTDRRIKSFLLQNEGRLPPVPG 518
           HP  T R + SF   N  + PP  G
Sbjct: 334 HPYGTTRLMSSFAFDNNDQGPPQDG 358


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 3   SLVEDRIWIRLAGAAILVNK*PGDSDLVSVKSFVIH 110
           S VE R+W R A AA  +   P D    + + F  H
Sbjct: 531 SSVESRVWPRAAAAAERLWTNPSDYVKQTERRFYRH 566


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -3

Query: 78  PNRQVTYSPRWPRPPTESKFD 16
           P    T  P W RPP+    D
Sbjct: 402 PTISTTPRPEWARPPSTPSAD 422


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 444 HPQLTDRRIKSFLLQNEGRLPP 509
           HP  T R + SF   N  + PP
Sbjct: 333 HPYGTTRLMSSFAFDNNDQGPP 354


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 444 HPQLTDRRIKSFLLQNEGRLPP 509
           HP  T R + SF   N  + PP
Sbjct: 334 HPYGTTRLMSSFAFDNNDQGPP 355


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +3

Query: 375 PQPG*EGAP*HLL*HPRCPRQVPHPQLTD 461
           P PG    P HL  HP      P  +L D
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPGPKQELPD 260


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +3

Query: 375 PQPG*EGAP*HLL*HPRCPRQVPHPQLTD 461
           P PG    P HL  HP      P  +L D
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPGPKQELPD 152


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 175 RHSAQPAQLTLLYTHYLPF 119
           R +  P  L ++ TH +PF
Sbjct: 444 RENIDPIPLVVVLTHLIPF 462


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 202 LHSSSPPPFRHSAQP 158
           LHS   PP  H  +P
Sbjct: 89  LHSHHGPPIHHQIRP 103


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 202 LHSSSPPPFRHSAQP 158
           LHS   PP  H  +P
Sbjct: 89  LHSHHGPPIHHQIRP 103


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 81 NPNRQVTYSPRWPRPP 34
          NPN   TY P    PP
Sbjct: 31 NPNANSTYPPACYSPP 46


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 81 NPNRQVTYSPRWPRPP 34
          NPN   TY P    PP
Sbjct: 31 NPNANSTYPPACYSPP 46


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
          protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 81 NPNRQVTYSPRWPRPP 34
          NPN   TY P    PP
Sbjct: 31 NPNANSTYPPACYSPP 46


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 81 NPNRQVTYSPRWPRPP 34
          NPN   TY P    PP
Sbjct: 31 NPNANSTYPPACYSPP 46


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
          protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 81 NPNRQVTYSPRWPRPP 34
          NPN   TY P    PP
Sbjct: 31 NPNANSTYPPACYSPP 46


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 202 LHSSSPPPFRHSAQP 158
           LHS   PP  H  +P
Sbjct: 89  LHSHHGPPIHHQIRP 103


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 81 NPNRQVTYSPRWPRPP 34
          NPN   TY P    PP
Sbjct: 31 NPNANSTYPPACYSPP 46


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
          protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 81 NPNRQVTYSPRWPRPP 34
          NPN   TY P    PP
Sbjct: 31 NPNANSTYPPACYSPP 46


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 202 LHSSSPPPFRHSAQP 158
           LHS   PP  H  +P
Sbjct: 89  LHSHHGPPIHHQIRP 103


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
          Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 81 NPNRQVTYSPRWPRPP 34
          NPN   TY P    PP
Sbjct: 31 NPNANSTYPPACYSPP 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,644
Number of Sequences: 336
Number of extensions: 2382
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)