Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304B11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 160 6e-40
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 1e-35
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 134 3e-32
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 2e-28
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 36 0.015
SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) 33 0.11
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 31 0.44
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 31 0.76
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 31 0.76
SB_43756| Best HMM Match : SlyX (HMM E-Value=3.7) 30 1.3
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 29 3.1
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_44921| Best HMM Match : Pepsin-I3 (HMM E-Value=6.4) 28 5.4
SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19) 28 5.4
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 27 7.1
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 27 7.1
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12) 27 7.1
SB_42553| Best HMM Match : VLPT (HMM E-Value=1) 27 9.4
SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1) 27 9.4
SB_31531| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 27 9.4
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 160 bits (389), Expect = 6e-40
Identities = 82/128 (64%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
Frame = +1
Query: 112 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 291
M+++E++VY AKLAEQAERYD+MV +MK VA EL+ E+RNLLSVAYKNVIGARR
Sbjct: 1 MADKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGT---ELSTEDRNLLSVAYKNVIGARR 57
Query: 292 ASWRIISSIEQKEETKGAE-DKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGE 468
ASWRII+SIEQKEE+KG + KL MIR YR +E+EL+ IC +IL +LD LI +SQ+ E
Sbjct: 58 ASWRIITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEE 117
Query: 469 SKVFYYKM 492
SKVFY K+
Sbjct: 118 SKVFYNKI 125
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 146 bits (354), Expect = 1e-35
Identities = 69/136 (50%), Positives = 102/136 (75%)
Frame = +1
Query: 112 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 291
M RE +Y AKL+EQ +RYDEM + MK V+ + +L+ EERNLLSV+YKN++G RR
Sbjct: 81 MVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYP---KLSKEERNLLSVSYKNIVGQRR 137
Query: 292 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGES 471
+SWR+ISSIE+K L +++ Y++ +EKEL+D+C ++LG+L++ LIP ++ E+
Sbjct: 138 SSWRVISSIEEK---TAESSSLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEEN 193
Query: 472 KVFYYKMKGDYHRYLA 519
KVFY+K+KGDY+RYLA
Sbjct: 194 KVFYFKLKGDYYRYLA 209
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 134 bits (325), Expect = 3e-32
Identities = 69/135 (51%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Frame = +1
Query: 121 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 300
RE+ ++ AK+AEQAERYD+MV AM V N+ EERNLLSVAYKNV+GARR+SW
Sbjct: 11 REELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLND---EERNLLSVAYKNVVGARRSSW 67
Query: 301 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ---TGES 471
R+ISS+EQ K E+ + + YR + EL C+++L +L+ YL+ Q E+
Sbjct: 68 RVISSMEQ----KAPEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDINTEA 123
Query: 472 KVFYYKMKGDYHRYL 516
KVFY KM+GDYHRYL
Sbjct: 124 KVFYLKMRGDYHRYL 138
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 122 bits (293), Expect = 2e-28
Identities = 62/112 (55%), Positives = 80/112 (71%)
Frame = +1
Query: 178 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKL 357
M +AMK +S+ L EERNLLSVAYKNV+GA+R+SWR+ISSIEQK E G+E K
Sbjct: 1 MAKAMKEATE--ISET-LEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLE--GSERKK 55
Query: 358 NMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYHRY 513
YR +E EL ++C +L +L+ LIP++Q+ ESKVFY KMKGDY+RY
Sbjct: 56 QNTETYRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRY 107
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 72.5 bits (170), Expect = 2e-13
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Frame = +1
Query: 94 NHLSSTMS---EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVA 264
NH S + R + V AKLAEQ ER+++++ MK N S N+ E RNLLSV
Sbjct: 178 NHPSGVVQMQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNK---EHRNLLSVG 234
Query: 265 YKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDIL 423
YKNV+G++R +WR + + + +L I Y+ ++E EL+ +C +IL
Sbjct: 235 YKNVVGSKRFAWRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 36.3 bits (80), Expect = 0.015
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Frame = +1
Query: 124 EDNVYKAKLAEQAERYDEMV----EAMKNVASRNVSDNELTVEE----RNLLSVAYKNVI 279
+ N+ K KL + E Y + + +A +N N N+L +E R+L S+ + N +
Sbjct: 1955 DPNLQK-KLKDLEESYQKALKDNEDAERNYLDLNRKYNKLVMEHGNISRDLESLKHDNDL 2013
Query: 280 GARRA-SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDK 438
R ++ Q++E + A++K+N + AY++ E++LR+ D++ K
Sbjct: 2014 KNERIIDLESSLAVYQEQELQSAKNKINRLEAYKTSYEEKLRNQQEDLVAAQQK 2067
>SB_20371| Best HMM Match : U-box (HMM E-Value=0.075)
Length = 515
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +1
Query: 97 HLSSTMSEREDNVYKAKLAEQAERYDEM---VEAMKNVASRNVSDNELTVEERNLLSVAY 267
H+ M + D V +AK A+ YD + ++ + + + D E +++LL+ +
Sbjct: 345 HMEREMDQWMDAVQQAK-AQFTREYDPAKSEIPDIETIFQKKIEDLESANNDKDLLN--H 401
Query: 268 KNVIGARRASWRIISSIEQKEETKGAED 351
K ++G + W++ EQ GAED
Sbjct: 402 KKIVGFDKKIWKVHHEKEQMIGAGGAED 429
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 31.5 bits (68), Expect = 0.44
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Frame = +1
Query: 94 NHLSSTMSEREDNVYKAKLAEQAERYDEMVEAM----KNVASRNVSDNELTVEERNLLSV 261
N L ST++ER + ++ L E R+DE + ++ KN+ R S N+L +N S
Sbjct: 217 NSLVSTLNERLERK-ESTLMECRRRHDEELTSLQKKIKNLEERLSSTNQLISSTKNDESG 275
Query: 262 AYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKE 396
+ +I ++ I+ +E+ + AE +L M A ++E E
Sbjct: 276 RIQALIKRVCLQYKRINRLEETRHQEKAEMELKM--AQLKEIENE 318
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 30.7 bits (66), Expect = 0.76
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = +1
Query: 94 NHLSSTMSERED-NVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYK 270
N ++ ER D +V L Q R + + MK R+ ++ + +E++ L A
Sbjct: 430 NSVNVLRKERVDLDVQVTNLRSQKIRLEAEISVMKEERRRDDNEVDHLRKEKSDLEKAMH 489
Query: 271 NVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 417
++ R ++ + I E+T + + +R +EKELRD+ S+
Sbjct: 490 SL---RSEKTKVETDITMAEDTWRKRNDTSELRFEADDLEKELRDLRSE 535
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 30.7 bits (66), Expect = 0.76
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 136 YKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 315
YK K E + ++ +A ++ S N SDNE+ + RN +S + + R +S +
Sbjct: 1024 YKIKFIEWRKLQSQLQKARRSSPSVN-SDNEVCHDARNTISKLREEMEELRESSAAAQKA 1082
Query: 316 IEQKEETKGAEDKLN--MIRAYRSQVEKELRD 405
+EQ+++ + + ++N I R +++K + +
Sbjct: 1083 LEQEKQQRLEKLEMNNQEIMFLREELQKAVEE 1114
>SB_43756| Best HMM Match : SlyX (HMM E-Value=3.7)
Length = 179
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/80 (20%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 100 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEER-NLLSVAYKNV 276
LSS +SER + + +L + E Y ++ ++ R+ +L ++ L+++++
Sbjct: 53 LSSVLSERCGELERRQLEMEREFYTKIQALEAQISDRSEEWKDLLAQDHAKLMTISHDTT 112
Query: 277 IGARRASWRIISSIEQKEET 336
+ W++ + KE+T
Sbjct: 113 YDLKSGYWQVEMDPKDKEKT 132
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 256 TAGSSPPLSAHCRTRCVMLHSSSPPPFRHSAQPAQLTLLYTHYLPFP 116
TA S PP +A C T C + P P P T L H LP P
Sbjct: 40 TALSPPPATALCPTPC---YGPVPHPLLRPCVPPPATALVPHPLPRP 83
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 196 SSSPPPFRH-SAQPAQLTLLYTHYLPFPTLWMTNDFTLTKSESPGHLF 56
+S P P+ S QPA T YT Y P T+ T + SP F
Sbjct: 73 ASQPAPYTPASGQPASYTPAYTPYTPASTVGRMPPTTSQSTPSPAPFF 120
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 109 TMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAY 267
T+SERE KA++ A E A ++A + ++NE +E R+L +A+
Sbjct: 788 TISEREAIANKARIRSGALTLSETGPAFVDLALKVPAENEEKLENRDLEEMAW 840
>SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 127 DNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLL 255
D VY+ L RY+E+V + N + +N TV +R ++
Sbjct: 80 DEVYRPYLTTDETRYNEVVFVVDNTVYQRYHNNTKTVTDRVII 122
>SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 127 DNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEER 246
D VY+ L RY EMV + N + +N TV ++
Sbjct: 170 DEVYRPYLTTDETRYTEMVFVVDNTVYQRYQNNTKTVTDK 209
>SB_44921| Best HMM Match : Pepsin-I3 (HMM E-Value=6.4)
Length = 105
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/84 (21%), Positives = 36/84 (42%)
Frame = +1
Query: 94 NHLSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKN 273
N + ER + ++ + +D ++ NV R + L + L+ A
Sbjct: 21 NKTAELYKERAKALSRSPEETRYSSFDTSLDYNGNVLHRGDLEASLNHQLTEKLAEAESE 80
Query: 274 VIGARRASWRIISSIEQKEETKGA 345
++ +R + +IS +EQK +GA
Sbjct: 81 ILASRMSRDNLISQVEQKIAARGA 104
>SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/84 (21%), Positives = 36/84 (42%)
Frame = +1
Query: 94 NHLSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKN 273
N + ER + ++ + +D ++ NV R + L + L+ A
Sbjct: 98 NKTAELYKERAKALSRSPEETRYSSFDTSLDYNGNVLHRGDLEASLNHQLTEKLAEAESE 157
Query: 274 VIGARRASWRIISSIEQKEETKGA 345
++ +R + +IS +EQK +GA
Sbjct: 158 ILASRMSRDNLISQVEQKIAARGA 181
>SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 449 GMRYLSRTPRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEE 309
G R RTP ++ + S +W YALI+F+L F+ C++ E
Sbjct: 77 GSRLKGRTPHLTRALM--SILSWSEYALILFSL----FIGVACNILE 117
>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
Length = 1199
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +3
Query: 228 ADSGGEEPAVGRLQERDRRPPRLLADHLLHR---TEGRNKRRRGQIEHD 365
A GG +GR E DR P+ R EG +RRRG+ D
Sbjct: 1082 AQKGGYASQIGRRNEPDREQPKQRVGRRDERDPDDEGTGRRRRGRERDD 1130
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 292 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLI--PSSQTG 465
+S IS I +K+ +++ + Y Q E + S ++ LDKYLI S+TG
Sbjct: 980 SSLETISKIREKQRKDARQERKKEVSDYNWQELIENGKLPSLVVSELDKYLIHYNLSKTG 1039
Query: 466 ESK 474
+ K
Sbjct: 1040 KKK 1042
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 292 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLI--PSSQTG 465
+S IS I +K+ +++ + Y Q E + S ++ LDKYLI S+TG
Sbjct: 1331 SSLETISKIREKQRKDARQERKKEVSDYNWQELIENGKLPSLVVSELDKYLIHYNLSKTG 1390
Query: 466 ESK 474
+ K
Sbjct: 1391 KKK 1393
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 27.5 bits (58), Expect = 7.1
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +1
Query: 139 KAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSI 318
K + A E ++AMK++ ++ + +ER + A++N I R S++
Sbjct: 248 KTESMAMASSSQEQIKAMKDLLAKARDEITSLKDEREKMITAHQNRIEQLRESFK----- 302
Query: 319 EQKEETKGAEDKLN-MIRAYRSQVEKELRDICSDILGVLDKYL 444
++ EE DKLN I + + +KE ++ ++ K L
Sbjct: 303 KKMEEADAWPDKLNKAILEEQEKFKKEKDELWKELNDSFQKEL 345
>SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12)
Length = 716
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 69 QVTYSPRWPRPPTESKFDLQLNS 1
Q+T RW PPTE FD +++
Sbjct: 210 QITPQKRWSAPPTEKGFDRAIST 232
>SB_42553| Best HMM Match : VLPT (HMM E-Value=1)
Length = 399
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 106 STMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTV 237
+T E+ + + K A Q+E DE++E M+ +RNV + T+
Sbjct: 54 TTDCEQLELYQQVKKAVQSENIDEVLEIMRCAKARNVVPHTKTI 97
>SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1)
Length = 1139
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 226 HCRTRCVMLHSSSPPPFRHSAQPAQLTLLYTHY 128
+C T V+L S P +R +PA +T T++
Sbjct: 518 NCHTNSVILSSRKRPTYRSRKRPAPITTTITNH 550
>SB_31531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 27.1 bits (57), Expect = 9.4
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +1
Query: 118 EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDN-ELTVEERNLLSVAYKNVIGARRA 294
ERE KAKL + +RY E + + N DN E V+E V K V G +
Sbjct: 129 ERERTTNKAKLLLKKKRYQEQLLQRTD----NQLDNLEKLVQEIEFAQVQIKVVEGLKTG 184
Query: 295 SWRIISSIEQKEETKGAEDKLNMIRAYRSQVE--KELRDICSDIL 423
+ + Q E ED ++ + VE KE+ D+ S L
Sbjct: 185 N----ECLNQLHEMMSIEDVERIMDETKEAVEYQKEIDDLLSGSL 225
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 27.1 bits (57), Expect = 9.4
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Frame = +1
Query: 118 EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNL--LSVAYKNVIGARR 291
E+ N ++ L + ++Y+E++EA++ S+ VEER L L+ A +G
Sbjct: 1651 EKMKNDHEQDLTSERKKYEEIIEALQGELSK-AEVRLKEVEERLLSALAEAKSQKLGNDP 1709
Query: 292 ASWRIISSIEQKEETKGAEDKLNM-IRAYRSQVEKELRDICSDILGVLDK 438
S I + K KG E + + + A + + E+ L+ + ++ + +K
Sbjct: 1710 ESPTSIDESDIKLIKKGLEFEYDQKLSAEKRKFEETLQGLRKEVGNLQEK 1759
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,033,515
Number of Sequences: 59808
Number of extensions: 329646
Number of successful extensions: 963
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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