Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304B08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-18|CAB11555.2|  387|Caenorhabditis elegans Hypothetical p...    29   1.5  
Z54327-2|CAA91123.1|  658|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AF480492-1|AAL84282.1|  658|Caenorhabditis elegans EFF-1A precur...    29   1.5  
AF003148-4|AAR25646.1|  301|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF003148-2|AAR25645.1|  400|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF003148-1|AAR25644.1|  432|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF067937-1|AAF99912.1|  533|Caenorhabditis elegans Hypothetical ...    27   6.2  
AF039710-1|AAB96691.1|  316|Caenorhabditis elegans Serpentine re...    27   6.2  

>Z98866-18|CAB11555.2|  387|Caenorhabditis elegans Hypothetical
           protein Y49E10.21 protein.
          Length = 387

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 24  KLIDRFVDFLTIVILPCFFKNVKASLFYKIVSHLHQK*GSSFNFGMSG 167
           K  ++FVDF+ ++      KN+K    +  V+ + +K   S  F +SG
Sbjct: 288 KFNEKFVDFIKLITRKFLEKNIKEPTIFSNVAQMLKKFKISSEFNLSG 335


>Z54327-2|CAA91123.1|  658|Caenorhabditis elegans Hypothetical
           protein C26D10.5a protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 439 IKISRKLIVYWFIP*TVIILFYKIGLPLKLCWFSDSATLCNKKTNS 302
           + I+  ++VY  +   + +L  KI +PL  CW    +  CN  ++S
Sbjct: 556 VMIATDIVVYLGVLCILYLLITKIIVPLVRCWVCPMSIFCNGSSSS 601


>AF480492-1|AAL84282.1|  658|Caenorhabditis elegans EFF-1A precursor
           protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 439 IKISRKLIVYWFIP*TVIILFYKIGLPLKLCWFSDSATLCNKKTNS 302
           + I+  ++VY  +   + +L  KI +PL  CW    +  CN  ++S
Sbjct: 556 VMIATDIVVYLGVLCILYLLITKIIVPLVRCWVCPMSIFCNGSSSS 601


>AF003148-4|AAR25646.1|  301|Caenorhabditis elegans Hypothetical
           protein F32B5.6d protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -1

Query: 161 HTKIERRSLLLVQVTNNFVK*RCFNIFKETWQNYNGQEVHKPVNKFIISIIN 6
           H K++   L++V++          N   +    +  Q + K VNKF+  +IN
Sbjct: 14  HKKVDSNLLVVVEIKMKESLFEPLNYLPDVETAFRSQRIEKAVNKFVDDVIN 65


>AF003148-2|AAR25645.1|  400|Caenorhabditis elegans Hypothetical
           protein F32B5.6b protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -1

Query: 161 HTKIERRSLLLVQVTNNFVK*RCFNIFKETWQNYNGQEVHKPVNKFIISIIN 6
           H K++   L++V++          N   +    +  Q + K VNKF+  +IN
Sbjct: 145 HKKVDSNLLVVVEIKMKESLFEPLNYLPDVETAFRSQRIEKAVNKFVDDVIN 196


>AF003148-1|AAR25644.1|  432|Caenorhabditis elegans Hypothetical
           protein F32B5.6a protein.
          Length = 432

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -1

Query: 161 HTKIERRSLLLVQVTNNFVK*RCFNIFKETWQNYNGQEVHKPVNKFIISIIN 6
           H K++   L++V++          N   +    +  Q + K VNKF+  +IN
Sbjct: 145 HKKVDSNLLVVVEIKMKESLFEPLNYLPDVETAFRSQRIEKAVNKFVDDVIN 196


>AF067937-1|AAF99912.1|  533|Caenorhabditis elegans Hypothetical
           protein F22F7.4 protein.
          Length = 533

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 333 LQLYVIKKQTRYFNILKLYQ 274
           LQLYV+     YFN+LK Y+
Sbjct: 198 LQLYVVSMVESYFNLLKEYE 217


>AF039710-1|AAB96691.1|  316|Caenorhabditis elegans Serpentine
           receptor, class x protein110 protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 98  FILQNC*SLAPKVRIFFQFWYVRPLKLFYANINNDT 205
           +IL +  S++  + +   F Y+ P+  FYA I +DT
Sbjct: 47  YILCSSKSISNTLVLLIYFGYIGPINAFYAAIGSDT 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,883,473
Number of Sequences: 27780
Number of extensions: 207949
Number of successful extensions: 433
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)