Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304B07f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022745-1|AAY55161.1| 155|Drosophila melanogaster IP14609p pro... 53 3e-07
AE013599-3393|AAF46843.1| 155|Drosophila melanogaster CG11301-P... 53 3e-07
AY118858-1|AAM50718.1| 133|Drosophila melanogaster GM21739p pro... 49 3e-06
BT001649-1|AAN71404.1| 601|Drosophila melanogaster RE43755p pro... 34 0.13
AY113515-1|AAM29520.1| 140|Drosophila melanogaster RE59557p pro... 34 0.13
AJ271142-1|CAB70603.1| 140|Drosophila melanogaster histone-fold... 34 0.13
AE014298-1740|AAF48131.1| 140|Drosophila melanogaster CG15736-P... 34 0.13
AE014298-960|AAF46204.1| 601|Drosophila melanogaster CG3075-PA ... 34 0.13
AY118516-1|AAM49885.1| 1322|Drosophila melanogaster LD15342p pro... 33 0.18
AE014297-3220|AAF56049.2| 1322|Drosophila melanogaster CG31151-P... 33 0.18
AE014297-3219|AAF56050.3| 1543|Drosophila melanogaster CG31151-P... 33 0.18
AE014297-3218|ABI31197.1| 1658|Drosophila melanogaster CG31151-P... 33 0.18
AB190214-1|BAE45705.1| 1658|Drosophila melanogaster winged eye p... 33 0.18
AY084137-1|AAL89875.1| 887|Drosophila melanogaster RE22456p pro... 33 0.31
AJ224882-1|CAA12181.1| 886|Drosophila melanogaster PAV-KLP prot... 33 0.31
AF005853-1|AAB81484.1| 750|Drosophila melanogaster anon2A12 pro... 33 0.31
AE014296-803|AAF47868.1| 887|Drosophila melanogaster CG1258-PA ... 33 0.31
AY070925-1|AAL48547.1| 183|Drosophila melanogaster RE03006p pro... 31 0.95
AE014298-1639|AAF48059.1| 183|Drosophila melanogaster CG1558-PA... 31 0.95
U95821-1|AAC24457.1| 718|Drosophila melanogaster putative trans... 31 1.3
BT023232-1|AAY55648.1| 718|Drosophila melanogaster IP02808p pro... 31 1.3
BT023220-1|AAY55636.1| 718|Drosophila melanogaster IP02908p pro... 31 1.3
BT023200-1|AAY55616.1| 718|Drosophila melanogaster IP03108p pro... 31 1.3
AE014297-3294|AAF56110.2| 718|Drosophila melanogaster CG4568-PA... 31 1.3
AY094820-1|AAM11173.1| 609|Drosophila melanogaster LD34893p pro... 29 3.8
AE013599-2637|AAF57737.2| 609|Drosophila melanogaster CG10915-P... 29 3.8
AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa cent... 29 5.1
U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormon... 28 6.7
BT022153-1|AAY51548.1| 219|Drosophila melanogaster IP01409p pro... 28 6.7
AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear rece... 28 6.7
BT001853-1|AAN71614.1| 88|Drosophila melanogaster RH61042p pro... 28 8.8
AE014296-1343|AAN12031.1| 88|Drosophila melanogaster CG32368-P... 28 8.8
AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB... 28 8.8
AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC... 28 8.8
>BT022745-1|AAY55161.1| 155|Drosophila melanogaster IP14609p
protein.
Length = 155
Score = 52.8 bits (121), Expect = 3e-07
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 10/109 (9%)
Frame = +3
Query: 225 QNMSEEECHEDVDISDITEHSESYLENEHLKFALTEA----TEADNNKLEFELNSEEQVH 392
+ + E E E+ D+ EH ++ +E E + A TE TE + E E +E+
Sbjct: 4 EELFEAEFSEEQDL----EHQQA-METEEAELAETEEPLEITEESPDNPEAESTTEQLTE 58
Query: 393 E------KKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
+ K + T+LP+ARI+NIMK+DPD+++ +++AVF+V KA
Sbjct: 59 KPVTNGNKAPADNEAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKA 107
>AE013599-3393|AAF46843.1| 155|Drosophila melanogaster CG11301-PA
protein.
Length = 155
Score = 52.8 bits (121), Expect = 3e-07
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 10/109 (9%)
Frame = +3
Query: 225 QNMSEEECHEDVDISDITEHSESYLENEHLKFALTEA----TEADNNKLEFELNSEEQVH 392
+ + E E E+ D+ EH ++ +E E + A TE TE + E E +E+
Sbjct: 4 EELFEAEFSEEQDL----EHQQA-METEEAELAETEEPLEITEESPDNPEAESTTEQLTE 58
Query: 393 E------KKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
+ K + T+LP+ARI+NIMK+DPD+++ +++AVF+V KA
Sbjct: 59 KPVTNGNKAPADNEAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKA 107
>AY118858-1|AAM50718.1| 133|Drosophila melanogaster GM21739p
protein.
Length = 133
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/34 (55%), Positives = 31/34 (91%)
Frame = +3
Query: 420 RSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
+ T+LP+ARI+NIMK+DPD+++ +++AVF+V KA
Sbjct: 52 KMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKA 85
>BT001649-1|AAN71404.1| 601|Drosophila melanogaster RE43755p
protein.
Length = 601
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 432 LPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
LP+ARIK IMK+D + +++ +A L KA
Sbjct: 154 LPLARIKKIMKLDENAKMIAGEAPLLFAKA 183
>AY113515-1|AAM29520.1| 140|Drosophila melanogaster RE59557p
protein.
Length = 140
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +3
Query: 426 TKLPIARIKNIMKMDPDVNIVSSDAVFLVTK 518
T LP++R++ IMK D +++++ +FL+TK
Sbjct: 18 TFLPLSRVRTIMKSSMDTGLITNEVLFLMTK 48
>AJ271142-1|CAB70603.1| 140|Drosophila melanogaster histone-fold
protein CHRAC subunit protein.
Length = 140
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +3
Query: 426 TKLPIARIKNIMKMDPDVNIVSSDAVFLVTK 518
T LP++R++ IMK D +++++ +FL+TK
Sbjct: 18 TFLPLSRVRTIMKSSMDTGLITNEVLFLMTK 48
>AE014298-1740|AAF48131.1| 140|Drosophila melanogaster CG15736-PA
protein.
Length = 140
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +3
Query: 426 TKLPIARIKNIMKMDPDVNIVSSDAVFLVTK 518
T LP++R++ IMK D +++++ +FL+TK
Sbjct: 18 TFLPLSRVRTIMKSSMDTGLITNEVLFLMTK 48
>AE014298-960|AAF46204.1| 601|Drosophila melanogaster CG3075-PA
protein.
Length = 601
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 432 LPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
LP+ARIK IMK+D + +++ +A L KA
Sbjct: 154 LPLARIKKIMKLDENAKMIAGEAPLLFAKA 183
>AY118516-1|AAM49885.1| 1322|Drosophila melanogaster LD15342p
protein.
Length = 1322
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +3
Query: 210 KPSSLQNMSEEECHEDVDISDI----TEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
KPS + ECH + SDI E S E ++ +T+AT+AD E
Sbjct: 274 KPSEASHTQPTECHTQTEPSDIPSASQEESAEQTPPEPIE-TMTQATQADQTSPEDLTGL 332
Query: 378 EEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSD 497
E + ++R + P+ I+ VNI+ S+
Sbjct: 333 ELLSNISTNSKPLVRVKQEPVEHIEQPAPQPQPVNIMPSE 372
>AE014297-3220|AAF56049.2| 1322|Drosophila melanogaster CG31151-PB,
isoform B protein.
Length = 1322
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +3
Query: 210 KPSSLQNMSEEECHEDVDISDI----TEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
KPS + ECH + SDI E S E ++ +T+AT+AD E
Sbjct: 274 KPSEASHTQPTECHTQTEPSDIPSASQEESAEQTPPEPIE-TMTQATQADQTSPEDLTGL 332
Query: 378 EEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSD 497
E + ++R + P+ I+ VNI+ S+
Sbjct: 333 ELLSNISTNSKPLVRVKQEPVEHIEQPAPQPQPVNIMPSE 372
>AE014297-3219|AAF56050.3| 1543|Drosophila melanogaster CG31151-PA,
isoform A protein.
Length = 1543
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +3
Query: 210 KPSSLQNMSEEECHEDVDISDI----TEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
KPS + ECH + SDI E S E ++ +T+AT+AD E
Sbjct: 495 KPSEASHTQPTECHTQTEPSDIPSASQEESAEQTPPEPIE-TMTQATQADQTSPEDLTGL 553
Query: 378 EEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSD 497
E + ++R + P+ I+ VNI+ S+
Sbjct: 554 ELLSNISTNSKPLVRVKQEPVEHIEQPAPQPQPVNIMPSE 593
>AE014297-3218|ABI31197.1| 1658|Drosophila melanogaster CG31151-PC,
isoform C protein.
Length = 1658
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +3
Query: 210 KPSSLQNMSEEECHEDVDISDI----TEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
KPS + ECH + SDI E S E ++ +T+AT+AD E
Sbjct: 610 KPSEASHTQPTECHTQTEPSDIPSASQEESAEQTPPEPIE-TMTQATQADQTSPEDLTGL 668
Query: 378 EEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSD 497
E + ++R + P+ I+ VNI+ S+
Sbjct: 669 ELLSNISTNSKPLVRVKQEPVEHIEQPAPQPQPVNIMPSE 708
>AB190214-1|BAE45705.1| 1658|Drosophila melanogaster winged eye
protein.
Length = 1658
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +3
Query: 210 KPSSLQNMSEEECHEDVDISDI----TEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
KPS + ECH + SDI E S E ++ +T+AT+AD E
Sbjct: 610 KPSEASHTQPTECHTQTEPSDIPSASQEESAEQTPPEPIE-TMTQATQADQTSPEDLTGL 668
Query: 378 EEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSD 497
E + ++R + P+ I+ VNI+ S+
Sbjct: 669 ELLSNISTNSKPLVRVKQEPVEHIEQPAPQPQPVNIMPSE 708
>AY084137-1|AAL89875.1| 887|Drosophila melanogaster RE22456p
protein.
Length = 887
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 300 ENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMD 470
E + KF+ A E+D NK EFEL EQ K Q+ I+ KL + + NI++ +
Sbjct: 633 EKQKKKFSSKLAVESDKNKREFELKLREQ-RVKLQERMRIKDEKLRL--VSNILQSE 686
>AJ224882-1|CAA12181.1| 886|Drosophila melanogaster PAV-KLP protein
protein.
Length = 886
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 300 ENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMD 470
E + KF+ A E+D NK EFEL EQ K Q+ I+ KL + + NI++ +
Sbjct: 632 EKQKKKFSSKLAVESDKNKREFELKLREQ-RVKLQERMRIKDEKLRL--VSNILQSE 685
>AF005853-1|AAB81484.1| 750|Drosophila melanogaster anon2A12
protein.
Length = 750
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 300 ENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMD 470
E + KF+ A E+D NK EFEL EQ K Q+ I+ KL + + NI++ +
Sbjct: 496 EKQKKKFSSKLAVESDKNKREFELKLREQ-RVKLQERMRIKDEKLRL--VSNILQSE 549
>AE014296-803|AAF47868.1| 887|Drosophila melanogaster CG1258-PA
protein.
Length = 887
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 300 ENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMD 470
E + KF+ A E+D NK EFEL EQ K Q+ I+ KL + + NI++ +
Sbjct: 633 EKQKKKFSSKLAVESDKNKREFELKLREQ-RVKLQERMRIKDEKLRL--VSNILQSE 686
>AY070925-1|AAL48547.1| 183|Drosophila melanogaster RE03006p
protein.
Length = 183
Score = 31.1 bits (67), Expect = 0.95
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +3
Query: 201 RKYKPSSLQNMSEEE-----CHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEF 365
R+Y+ S+L N+ ++ C ED ++ E ++ + + F + A + DN K+ F
Sbjct: 55 RRYEASTLFNIDLDDIWDPSCQED-EVQQYKERAQKE-QQKFFDFVMHAALDTDNRKVSF 112
Query: 366 ELNSEEQ 386
+ N E+Q
Sbjct: 113 KPNKEQQ 119
>AE014298-1639|AAF48059.1| 183|Drosophila melanogaster CG1558-PA
protein.
Length = 183
Score = 31.1 bits (67), Expect = 0.95
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +3
Query: 201 RKYKPSSLQNMSEEE-----CHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEF 365
R+Y+ S+L N+ ++ C ED ++ E ++ + + F + A + DN K+ F
Sbjct: 55 RRYEASTLFNIDLDDIWDPSCQED-EVQQYKERAQKE-QQKFFDFVMHAALDTDNRKVSF 112
Query: 366 ELNSEEQ 386
+ N E+Q
Sbjct: 113 KPNKEQQ 119
>U95821-1|AAC24457.1| 718|Drosophila melanogaster putative
transmembrane GTPase protein.
Length = 718
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 192 LLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKF-ALTEATEA 344
LLH K PS++ + + C + S+ TEH + E+EH++ AL++ A
Sbjct: 106 LLHEKILPSAMGHTTSCFCQVQANGSNETEHVKVEQEDEHMELSALSQLASA 157
>BT023232-1|AAY55648.1| 718|Drosophila melanogaster IP02808p
protein.
Length = 718
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 192 LLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKF-ALTEATEA 344
LLH K PS++ + + C + S+ TEH + E+EH++ AL++ A
Sbjct: 106 LLHEKILPSAMGHTTSCFCQVQANGSNETEHVKVEQEDEHMELSALSQLASA 157
>BT023220-1|AAY55636.1| 718|Drosophila melanogaster IP02908p
protein.
Length = 718
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 192 LLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKF-ALTEATEA 344
LLH K PS++ + + C + S+ TEH + E+EH++ AL++ A
Sbjct: 106 LLHEKILPSAMGHTTSCFCQVQANGSNETEHVKVEQEDEHMELSALSQLASA 157
>BT023200-1|AAY55616.1| 718|Drosophila melanogaster IP03108p
protein.
Length = 718
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 192 LLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKF-ALTEATEA 344
LLH K PS++ + + C + S+ TEH + E+EH++ AL++ A
Sbjct: 106 LLHEKILPSAMGHTTSCFCQVQANGSNETEHVKVEQEDEHMELSALSQLASA 157
>AE014297-3294|AAF56110.2| 718|Drosophila melanogaster CG4568-PA
protein.
Length = 718
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 192 LLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKF-ALTEATEA 344
LLH K PS++ + + C + S+ TEH + E+EH++ AL++ A
Sbjct: 106 LLHEKILPSAMGHTTSCFCQVQANGSNETEHVKVEQEDEHMELSALSQLASA 157
>AY094820-1|AAM11173.1| 609|Drosophila melanogaster LD34893p
protein.
Length = 609
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +3
Query: 186 RLLLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEH-LKFALTEATEADNNKLE 362
++L K + ++ EEE + + + + E +E E + FA E +LE
Sbjct: 291 QILAEEKQRSDTIAEGLEEESKKSLRMEEELEKQTHAMEQERKVLFAKLAKEELRVKELE 350
Query: 363 FELNSEEQVHEKKQKTEVIRSTKLPIARIK 452
ELN+ HE +K + + + +A K
Sbjct: 351 QELNALRSEHEALKKQQQLGGSGSSVAAAK 380
>AE013599-2637|AAF57737.2| 609|Drosophila melanogaster CG10915-PA
protein.
Length = 609
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +3
Query: 186 RLLLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEH-LKFALTEATEADNNKLE 362
++L K + ++ EEE + + + + E +E E + FA E +LE
Sbjct: 291 QILAEEKQRSDTIAEGLEEESKKSLRMEEELEKQTHAMEQERKVLFAKLAKEELRVKELE 350
Query: 363 FELNSEEQVHEKKQKTEVIRSTKLPIARIK 452
ELN+ HE +K + + + +A K
Sbjct: 351 QELNALRSEHEALKKQQQLGGSGSSVAAAK 380
>AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa
centrosomal protein protein.
Length = 2726
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Frame = +3
Query: 252 EDVDISDITEHS--ESYLENEHLKFALTEATEADNNKLEFEL------NSEEQVHEKKQK 407
++ I+D +HS E NE ++ EA E N + +L SE+QVH +
Sbjct: 213 DESQITDEQDHSMEEIVATNESIEVTY-EAEETVNTSQKQDLITDLDEESEDQVHVDNRP 271
Query: 408 TEVIRSTKLPIARIKNIMK 464
T +++ KLP+ + I++
Sbjct: 272 TSTLQALKLPVLQQPQIVE 290
>U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormone
receptor superfamilyprotein protein.
Length = 864
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +3
Query: 180 RKRLLLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKL 359
R +LL+ K SS + + ED+ I D T E E EA E DN +
Sbjct: 15 RSKLLVETCVKHSSSEQQQLQVKQEDL-IKDFTRDEEEQPSEE-------EAEEEDNEED 66
Query: 360 EFELNSEEQVHEKKQKTE 413
E E EE+ E++ + E
Sbjct: 67 EEEEGEEEEEDEEEDEDE 84
>BT022153-1|AAY51548.1| 219|Drosophila melanogaster IP01409p
protein.
Length = 219
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 396 KKQKTEVIRSTKLPIARIKNIMKMDP 473
+++KT +I ST + I RI N+MK +P
Sbjct: 2 QREKTSIIASTIVFIRRISNMMKRNP 27
>AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear
receptor E78A protein.
Length = 866
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +3
Query: 180 RKRLLLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKL 359
R +LL+ K SS + + ED+ I D T E E EA E DN +
Sbjct: 15 RSKLLVETCVKHSSSEQQQLQVKQEDL-IKDFTRDEEEQPSEE-------EAEEEDNEED 66
Query: 360 EFELNSEEQVHEKKQKTE 413
E E EE+ E++ + E
Sbjct: 67 EEEEGEEEEEDEEEDEDE 84
>BT001853-1|AAN71614.1| 88|Drosophila melanogaster RH61042p
protein.
Length = 88
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 321 ALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPD 476
A+ E+D K +F+L E HE + + + R+ K+ I+ + K+D +
Sbjct: 6 AMNHVVESDKKKRQFKLKIMELEHEMRMEKDPARA-KMIEEHIEKLKKLDEE 56
>AE014296-1343|AAN12031.1| 88|Drosophila melanogaster CG32368-PA
protein.
Length = 88
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 321 ALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPD 476
A+ E+D K +F+L E HE + + + R+ K+ I+ + K+D +
Sbjct: 6 AMNHVVESDKEKRQFKLKIMELEHEMRMEKDPARA-KMIEEHIEKLKKLDEE 56
>AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB,
isoform B protein.
Length = 379
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 225 QNMSEEECHEDVDISDITEHSESYLEN 305
++++EE HEDV I I H+ +EN
Sbjct: 161 ESITEERAHEDVAIRKIVRHTNLSVEN 187
>AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC,
isoform C protein.
Length = 1022
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 225 QNMSEEECHEDVDISDITEHSESYLEN 305
++++EE HEDV I I H+ +EN
Sbjct: 161 ESITEERAHEDVAIRKIVRHTNLSVEN 187
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,057,193
Number of Sequences: 53049
Number of extensions: 283484
Number of successful extensions: 957
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -