Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304B07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical ... 45 3e-05
AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric ... 36 0.013
AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric ... 36 0.013
U00057-1|AAA50726.2| 347|Caenorhabditis elegans Hypothetical pr... 31 0.50
AF024493-10|AAK68346.1| 232|Caenorhabditis elegans C. elegans N... 31 0.50
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 28 3.5
AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical... 28 3.5
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein. 28 4.7
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein. 28 4.7
Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical pr... 27 6.2
U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily as... 27 6.2
AC090999-12|ABD63206.1| 257|Caenorhabditis elegans Hypothetical... 27 6.2
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 27 8.1
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 27 8.1
AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protei... 27 8.1
AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN phosphat... 27 8.1
AF098993-7|ABN43095.1| 525|Caenorhabditis elegans Hypothetical ... 27 8.1
AF098993-6|AAC67469.2| 562|Caenorhabditis elegans Hypothetical ... 27 8.1
AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein. 27 8.1
AF078789-3|AAK68487.1| 295|Caenorhabditis elegans Hypothetical ... 27 8.1
AF078789-2|AAK21516.1| 318|Caenorhabditis elegans Hypothetical ... 27 8.1
AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical ... 27 8.1
AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical ... 27 8.1
AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical ... 27 8.1
AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dau... 27 8.1
AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical ... 27 8.1
>AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical
protein Y53F4B.3 protein.
Length = 179
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/49 (36%), Positives = 36/49 (73%)
Frame = +3
Query: 375 SEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
SEE V E ++ E + ++LP+ R+K +++M+PDV +++++A+ L+ KA
Sbjct: 17 SEEDVREIEEHVEELVRSQLPLGRVKKVVRMNPDVEMLNNEALQLMAKA 65
>AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform a protein.
Length = 1724
Score = 36.3 bits (80), Expect = 0.013
Identities = 23/86 (26%), Positives = 45/86 (52%)
Frame = +3
Query: 213 PSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVH 392
P ++ N+ E+ +E+ D + E E ENE A+ E ++D + E + ++EE V
Sbjct: 429 PGAIPNLDAEQ-NEEEDEEEEGEDEEEEEENEQDDVAVKEEEQSDKSDEENDGDNEENVS 487
Query: 393 EKKQKTEVIRSTKLPIARIKNIMKMD 470
+KK++ + + K +K + +MD
Sbjct: 488 KKKEEKKKEKKAK----EVKEVGRMD 509
>AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform b protein.
Length = 1758
Score = 36.3 bits (80), Expect = 0.013
Identities = 23/86 (26%), Positives = 45/86 (52%)
Frame = +3
Query: 213 PSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVH 392
P ++ N+ E+ +E+ D + E E ENE A+ E ++D + E + ++EE V
Sbjct: 429 PGAIPNLDAEQ-NEEEDEEEEGEDEEEEEENEQDDVAVKEEEQSDKSDEENDGDNEENVS 487
Query: 393 EKKQKTEVIRSTKLPIARIKNIMKMD 470
+KK++ + + K +K + +MD
Sbjct: 488 KKKEEKKKEKKAK----EVKEVGRMD 509
>U00057-1|AAA50726.2| 347|Caenorhabditis elegans Hypothetical
protein T24G10.2 protein.
Length = 347
Score = 31.1 bits (67), Expect = 0.50
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 372 NSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAV 503
+ E+ EKK+KTE ++ +LP+ + K +K D D + DAV
Sbjct: 86 SDHEEGEEKKEKTEKVKKEELPV-KAKKEVKEDSDSDSGVEDAV 128
>AF024493-10|AAK68346.1| 232|Caenorhabditis elegans C. elegans
NFYC-1 protein protein.
Length = 232
Score = 31.1 bits (67), Expect = 0.50
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 11/60 (18%)
Frame = +3
Query: 375 SEEQVHEKKQK-TEVI--------RSTKLPIARIKNIMKMDPDVN--IVSSDAVFLVTKA 521
+E+ EKKQK TE+ ++ +P+AR+K IM++D DV +++SDA + +A
Sbjct: 82 TEDFWREKKQKMTEISEEDMLNKSKNMSVPMARVKKIMRIDDDVRNFMIASDAPIFMAQA 141
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 234 SEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTE 413
SE++ E V I D T ++ N++ KF + NN +L +++ +KK+K E
Sbjct: 12 SEQKRKEKV-IEDKTFGLKNKKGNKNQKFVAQVENQVRNNNTRMDLVRQQEAAKKKEKDE 70
Query: 414 VI 419
++
Sbjct: 71 LL 72
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 520 ALVTKNTASLDTIFTSGSIF--IMFLILAIGSFVDLI 416
A TKN DT F SIF +M +I AI S VD +
Sbjct: 166 AYCTKNEVKKDTPFWGFSIFLIVMVVIAAIASIVDYV 202
>AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical
protein H20J04.1 protein.
Length = 843
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 207 YKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKL 359
YK L +S + V IS + SYLE+ H + + T AD N L
Sbjct: 251 YKKVDLTRVSATQVGTGVAISPFFSNVLSYLESSHAIKFIEKLTNADKNTL 301
>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 216 SSLQNMSEEECHEDVDISDITEHSESYLENEHL-KFALTEATEADNNKLE 362
+S+QN+ + + D+D+S++ + Y HL ++A+ E + NKL+
Sbjct: 644 NSVQNIGNSQSNTDMDVSEM----DVYRRASHLEEYAMQRVREIEENKLK 689
>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 216 SSLQNMSEEECHEDVDISDITEHSESYLENEHL-KFALTEATEADNNKLE 362
+S+QN+ + + D+D+S++ + Y HL ++A+ E + NKL+
Sbjct: 644 NSVQNIGNSQSNTDMDVSEM----DVYRRASHLEEYAMQRVREIEENKLK 689
>Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical
protein K12F2.2b protein.
Length = 582
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 216 SSLQNMSEEECHEDVDISDITEHSESYLENEHL-KFALTEATEADNNKLE 362
+S+QN+ + + D+D+S++ + Y HL ++A+ E + NKL+
Sbjct: 160 NSVQNIGNSQSNTDMDVSEM----DVYRRASHLEEYAMQRVREIEENKLK 205
>AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein.
Length = 582
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 216 SSLQNMSEEECHEDVDISDITEHSESYLENEHL-KFALTEATEADNNKLE 362
+S+QN+ + + D+D+S++ + Y HL ++A+ E + NKL+
Sbjct: 160 NSVQNIGNSQSNTDMDVSEM----DVYRRASHLEEYAMQRVREIEENKLK 205
>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
Length = 1066
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 216 SSLQNMSEEECHEDVDISDITEHSESYLENEHL-KFALTEATEADNNKLE 362
+S+QN+ + + D+D+S++ + Y HL ++A+ E + NKL+
Sbjct: 644 NSVQNIGNSQSNTDMDVSEM----DVYRRASHLEEYAMQRVREIEENKLK 689
>Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.10 protein.
Length = 376
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 255 DVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKL 434
D ++D+ E +E E EA E +E EE+V E K+K E +R
Sbjct: 121 DESMADVMEEINQEVEEEEEG----EAEEGQEEVVEEVEEDEEEVEEIKEKVEEVREVTP 176
Query: 435 PIARIKNIMK 464
P I + K
Sbjct: 177 PKDLINGMPK 186
>U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily
assigned gene nameprotein 151 protein.
Length = 785
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 237 EEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVH 392
EE+ ED+D SD E + E E + +EA E +++ F+ +E ++
Sbjct: 384 EEDSDEDMDDSDNEEVEDDSEEEEPMDDLKSEAGETTASEMMFDDGIDEDIN 435
>AC090999-12|ABD63206.1| 257|Caenorhabditis elegans Hypothetical
protein Y82E9BR.23 protein.
Length = 257
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = +3
Query: 183 KRLLLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLE 362
K L + Y ++ E D+DI + YL+ EH T+ N
Sbjct: 62 KELRVEDYYPRRDVKKFQEVREGNDLDILQSFDDESEYLDKEHSSRIRDLETKKRNCIAN 121
Query: 363 FELNSEEQVHE 395
F+L ++++V E
Sbjct: 122 FKLKNKKEVEE 132
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 225 QNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQ 404
++ EEE +ED D + ++ + ++E + E EA++ + E N E+V E+K+
Sbjct: 34 EDEDEEEENEDEDEDEDDDNDDDEDDDEEEEDEDEEEDEAEDEAEDDEEN--EEVKEEKE 91
Query: 405 KTEVI 419
EV+
Sbjct: 92 DEEVV 96
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 216 SSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSE 380
+ +Q +S+E + + I+ + E+ LE+E +FA T D KL ELN +
Sbjct: 986 NQIQKLSDENNEQRLTIAKL----ETALEDEKARFARQNNTIGDMQKLISELNEK 1036
>AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protein
protein.
Length = 962
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/37 (21%), Positives = 21/37 (56%)
Frame = +3
Query: 192 LLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLE 302
L H Y P++ NM ++ H D ++ + ++++++
Sbjct: 768 LFHESYHPNTAGNMLRQDYHTDSEVKIAEQEAKAFVD 804
>AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN
phosphatidylinositol 3' phosphatasehomolog DAF-18
protein.
Length = 962
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/37 (21%), Positives = 21/37 (56%)
Frame = +3
Query: 192 LLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLE 302
L H Y P++ NM ++ H D ++ + ++++++
Sbjct: 768 LFHESYHPNTAGNMLRQDYHTDSEVKIAEQEAKAFVD 804
>AF098993-7|ABN43095.1| 525|Caenorhabditis elegans Hypothetical
protein T10B11.7b protein.
Length = 525
Score = 27.1 bits (57), Expect = 8.1
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +3
Query: 201 RKYKPSSLQNMSEEECHEDVDISDITEHSESYLENE-HLKFALTEATEADNNKLEF-ELN 374
+ +KP+ +M+ E +D D +E+SES ++E K A+ AD+ +EF E+
Sbjct: 394 QSFKPAYTTDMTSEFLEDDGDTEFKSENSESDSDSEDEQKVENDVASSADD--IEFIEIV 451
Query: 375 SEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPD 476
E+ ++ +V S +N M M+ D
Sbjct: 452 EAERKMDQNLAQQVRSSFVTTAENTENNMLMEDD 485
>AF098993-6|AAC67469.2| 562|Caenorhabditis elegans Hypothetical
protein T10B11.7a protein.
Length = 562
Score = 27.1 bits (57), Expect = 8.1
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +3
Query: 201 RKYKPSSLQNMSEEECHEDVDISDITEHSESYLENE-HLKFALTEATEADNNKLEF-ELN 374
+ +KP+ +M+ E +D D +E+SES ++E K A+ AD+ +EF E+
Sbjct: 431 QSFKPAYTTDMTSEFLEDDGDTEFKSENSESDSDSEDEQKVENDVASSADD--IEFIEIV 488
Query: 375 SEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPD 476
E+ ++ +V S +N M M+ D
Sbjct: 489 EAERKMDQNLAQQVRSSFVTTAENTENNMLMEDD 522
>AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein.
Length = 962
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/37 (21%), Positives = 21/37 (56%)
Frame = +3
Query: 192 LLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLE 302
L H Y P++ NM ++ H D ++ + ++++++
Sbjct: 768 LFHESYHPNTAGNMLRQDYHTDSEVKIAEQEAKAFVD 804
>AF078789-3|AAK68487.1| 295|Caenorhabditis elegans Hypothetical
protein Y44E3B.1b protein.
Length = 295
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 330 EATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIAR 446
E E D K+ FE+ +EE+ + KT +T+ I R
Sbjct: 129 EYEEQDGYKMNFEVKTEEEKKPETMKTSKTMTTRRAIKR 167
>AF078789-2|AAK21516.1| 318|Caenorhabditis elegans Hypothetical
protein Y44E3B.1a protein.
Length = 318
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 330 EATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIAR 446
E E D K+ FE+ +EE+ + KT +T+ I R
Sbjct: 129 EYEEQDGYKMNFEVKTEEEKKPETMKTSKTMTTRRAIKR 167
>AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical
protein T04B8.5c protein.
Length = 836
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 130 Y*LSSACKTILARRYILEKDYYYTVNINLHRYKICLKKNATKMSTFQILQSIRNLI*KMN 309
Y +++ + RY+L+ DY ++ N HR I + +T + S+ NLI
Sbjct: 250 YVMTAFLMATTSSRYLLQNDYTVMMDTNFHRVFILIGIFST-----TLFSSMSNLIGSSR 304
Query: 310 ILN 318
+LN
Sbjct: 305 VLN 307
>AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical
protein T04B8.5b protein.
Length = 939
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 130 Y*LSSACKTILARRYILEKDYYYTVNINLHRYKICLKKNATKMSTFQILQSIRNLI*KMN 309
Y +++ + RY+L+ DY ++ N HR I + +T + S+ NLI
Sbjct: 353 YVMTAFLMATTSSRYLLQNDYTVMMDTNFHRVFILIGIFST-----TLFSSMSNLIGSSR 407
Query: 310 ILN 318
+LN
Sbjct: 408 VLN 410
>AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical
protein T04B8.5a protein.
Length = 952
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 130 Y*LSSACKTILARRYILEKDYYYTVNINLHRYKICLKKNATKMSTFQILQSIRNLI*KMN 309
Y +++ + RY+L+ DY ++ N HR I + +T + S+ NLI
Sbjct: 366 YVMTAFLMATTSSRYLLQNDYTVMMDTNFHRVFILIGIFST-----TLFSSMSNLIGSSR 420
Query: 310 ILN 318
+LN
Sbjct: 421 VLN 423
>AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dauer
formation protein 18 protein.
Length = 962
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/37 (21%), Positives = 21/37 (56%)
Frame = +3
Query: 192 LLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLE 302
L H Y P++ NM ++ H D ++ + ++++++
Sbjct: 768 LFHESYHPNTAGNMLRQDYHTDSEVKIAEQEAKAFVD 804
>AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical
protein Y54G2A.38 protein.
Length = 520
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 6 FKYCSCFFTNYKLNFLYLIQ*IKLLNKLFYSAIVKDY 116
F YCS F Y L + L++ K F+ ++ DY
Sbjct: 12 FGYCSISFVIYTLLIIMLLKNWKDFKSAFFHIVIADY 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,279,863
Number of Sequences: 27780
Number of extensions: 161855
Number of successful extensions: 646
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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