Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304B07f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 0.82
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 0.82
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 3.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 3.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 3.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.8
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 7.7
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 497 IARYNIYIWVHFHNVFNSRYRKLCR 423
I Y IYIW + ++RKL R
Sbjct: 543 IPGYMIYIWFTTSGTISEKFRKLIR 567
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 497 IARYNIYIWVHFHNVFNSRYRKLCR 423
I Y IYIW + ++RKL R
Sbjct: 596 IPGYMIYIWFTTSGTISEKFRKLIR 620
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +3
Query: 198 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 378 EEQV 389
EQ+
Sbjct: 116 IEQI 119
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +3
Query: 198 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 378 EEQV 389
EQ+
Sbjct: 116 IEQI 119
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +3
Query: 198 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 378 EEQV 389
EQ+
Sbjct: 116 IEQI 119
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +3
Query: 198 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 378 EEQV 389
EQ+
Sbjct: 116 IEQI 119
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +3
Query: 198 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 378 EEQV 389
EQ+
Sbjct: 116 IEQI 119
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +3
Query: 198 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 378 EEQV 389
EQ+
Sbjct: 116 IEQI 119
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +3
Query: 198 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 378 EEQV 389
EQ+
Sbjct: 116 IEQI 119
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +3
Query: 198 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 378 EEQV 389
EQ+
Sbjct: 116 IEQI 119
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +3
Query: 198 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 289 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 348
Query: 378 EEQV 389
EQ+
Sbjct: 349 IEQI 352
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +3
Query: 198 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 377
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 289 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 348
Query: 378 EEQV 389
EQ+
Sbjct: 349 IEQI 352
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 7 LNTVAVFLRITNLI 48
LN +VF+RI NLI
Sbjct: 270 LNMASVFMRIFNLI 283
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 7 LNTVAVFLRITNLI 48
LN +VF+RI NLI
Sbjct: 238 LNMASVFMRIFNLI 251
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 479 YIWVHFHNVFNSRY 438
YIW HF VF +
Sbjct: 113 YIWSHFPYVFGEAF 126
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,250
Number of Sequences: 438
Number of extensions: 2221
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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