Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304B07f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50480.1 68418.m06252 CCAAT-box binding transcription factor ... 44 8e-05
At5g27910.1 68418.m03352 CCAAT-box binding transcription factor ... 42 3e-04
At5g50490.1 68418.m06254 CCAAT-box binding transcription factor ... 41 6e-04
At1g08970.4 68414.m01000 CCAAT-box binding transcription factor ... 39 0.002
At1g08970.3 68414.m00999 CCAAT-box binding transcription factor ... 39 0.002
At1g08970.2 68414.m00998 CCAAT-box binding transcription factor ... 39 0.002
At1g08970.1 68414.m00997 CCAAT-box binding transcription factor ... 39 0.002
At5g63470.1 68418.m07968 CCAAT-box binding transcription factor ... 39 0.002
At3g48590.1 68416.m05305 CCAAT-box binding transcription factor ... 39 0.002
At1g54830.3 68414.m06253 CCAAT-box binding transcription factor ... 39 0.002
At1g54830.2 68414.m06252 CCAAT-box binding transcription factor ... 39 0.002
At1g54830.1 68414.m06251 CCAAT-box binding transcription factor ... 39 0.002
At1g56170.1 68414.m06454 transcription factor, putative similar ... 38 0.003
At5g50470.1 68418.m06250 CCAAT-box binding transcription factor ... 38 0.004
At5g43250.1 68418.m05285 transcription factor, putative similar ... 37 0.009
At5g38140.1 68418.m04596 histone-like transcription factor (CBF/... 36 0.022
At1g73870.1 68414.m08554 zinc finger (B-box type) family protein 32 0.20
At1g07980.1 68414.m00869 histone-like transcription factor (CBF/... 32 0.20
At4g00760.1 68417.m00106 two-component responsive regulator fami... 31 0.62
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 30 1.1
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 30 1.1
At3g20760.1 68416.m02626 hypothetical protein 30 1.1
At3g04550.1 68416.m00483 expressed protein 30 1.1
At5g03500.1 68418.m00306 transcriptional co-activator-related lo... 29 1.4
At1g02540.1 68414.m00205 hypothetical protein 29 1.4
At3g27670.1 68416.m03455 expressed protein 29 2.5
At5g10190.1 68418.m01179 transporter-related low similarity to s... 28 4.4
At5g63610.1 68418.m07986 protein kinase, putative similar to cyc... 27 5.8
At1g32930.1 68414.m04056 galactosyltransferase family protein co... 27 5.8
At1g20240.1 68414.m02528 hypothetical protein 27 5.8
At1g19870.1 68414.m02492 calmodulin-binding family protein conta... 27 5.8
At5g65080.1 68418.m08186 MADS-box family protein 27 7.7
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 27 7.7
At1g69580.1 68414.m08003 myb family transcription factor contain... 27 7.7
At1g13960.2 68414.m01642 WRKY family transcription factor simila... 27 7.7
At1g13960.1 68414.m01641 WRKY family transcription factor simila... 27 7.7
>At5g50480.1 68418.m06252 CCAAT-box binding transcription factor
Hap5a, putative GI:14577940 CCAAT-binding protein
subunit HAP5 {Hypocrea jecorina} similar to
Transcription factor GB:CAA74053 GI:2398533 from
[Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 202
Score = 43.6 bits (98), Expect = 8e-05
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +3
Query: 393 EKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
E+ + ++ +LP+ARIK IMK DPDV++VS++A + KA
Sbjct: 42 EQMETVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKA 84
>At5g27910.1 68418.m03352 CCAAT-box binding transcription factor
Hap5a, putative
Length = 187
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 432 LPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
LPI RIK IMK DPDV +++S+A L++KA
Sbjct: 37 LPITRIKKIMKYDPDVTMIASEAPILLSKA 66
>At5g50490.1 68418.m06254 CCAAT-box binding transcription factor
Hap5a, putative
Length = 186
Score = 40.7 bits (91), Expect = 6e-04
Identities = 16/35 (45%), Positives = 29/35 (82%)
Frame = +3
Query: 417 IRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
+++ + PI+RIK IMK DPDV++++++A L++KA
Sbjct: 32 VKNHEFPISRIKRIMKFDPDVSMIAAEAPNLLSKA 66
>At1g08970.4 68414.m01000 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 381 EQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
E ++ +KT ++ LP+ARIK IMK D DV ++S++A + +A
Sbjct: 64 ENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARA 110
>At1g08970.3 68414.m00999 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 381 EQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
E ++ +KT ++ LP+ARIK IMK D DV ++S++A + +A
Sbjct: 64 ENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARA 110
>At1g08970.2 68414.m00998 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 381 EQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
E ++ +KT ++ LP+ARIK IMK D DV ++S++A + +A
Sbjct: 64 ENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARA 110
>At1g08970.1 68414.m00997 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 381 EQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
E ++ +KT ++ LP+ARIK IMK D DV ++S++A + +A
Sbjct: 64 ENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARA 110
>At5g63470.1 68418.m07968 CCAAT-box binding transcription factor
Hap5a, putative
Length = 250
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 420 RSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
++ +LP+ARIK IMK D DV ++S++A L KA
Sbjct: 75 KNHQLPLARIKKIMKADEDVRMISAEAPILFAKA 108
>At3g48590.1 68416.m05305 CCAAT-box binding transcription factor
Hap5a, putative
Length = 234
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 420 RSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
++ +LP+ARIK IMK D DV ++S++A L KA
Sbjct: 62 KNHQLPLARIKKIMKADEDVRMISAEAPILFAKA 95
>At1g54830.3 68414.m06253 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 402 QKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
+KT ++ LP+ARIK IMK D DV ++S++A + +A
Sbjct: 61 EKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARA 100
>At1g54830.2 68414.m06252 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 402 QKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
+KT ++ LP+ARIK IMK D DV ++S++A + +A
Sbjct: 61 EKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARA 100
>At1g54830.1 68414.m06251 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 402 QKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
+KT ++ LP+ARIK IMK D DV ++S++A + +A
Sbjct: 61 EKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARA 100
>At1g56170.1 68414.m06454 transcription factor, putative similar to
Transcription factor GB:CAA74053 GI:2398533 from
[Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 199
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +3
Query: 384 QVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
Q+ E + T+ T LP+ARIK IMK D DV ++S++A + KA
Sbjct: 62 QMQEIEHTTDFKNHT-LPLARIKKIMKADEDVRMISAEAPVIFAKA 106
>At5g50470.1 68418.m06250 CCAAT-box binding transcription factor
Hap5a, putative contains similarity to GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
Length = 212
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +3
Query: 417 IRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
++ P+ RIK IMK +P+VN+V+++A L++KA
Sbjct: 59 VKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKA 93
>At5g43250.1 68418.m05285 transcription factor, putative similar to
heme activated protein GI:6289057 from (Arabidopsis
thaliana) GI:14577940 CCAAT-binding protein subunit HAP5
{Hypocrea jecorina} similar to Transcription factor
GB:CAA74053 GI:2398533 from [Arabidopsis thaliana]
similarity to transcription factor Hap5a similar to
transcription factor Hap5a [Arabidopsis
thaliana](GI:6523090)
Length = 130
Score = 36.7 bits (81), Expect = 0.009
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +3
Query: 429 KLPIARIKNIMKMDPDVNIVSSDAVFLVT 515
+ PI R+K IMK+D D+N ++S+A+ ++T
Sbjct: 11 EFPIGRVKKIMKLDKDINKINSEALHVIT 39
>At5g38140.1 68418.m04596 histone-like transcription factor
(CBF/NF-Y) family protein similar to CCAAT-binding
transcription factor subunit AAB-1 (GI:2583171)
[Neurospora crassa]; contains a CBF/NF-Y subunit
signature (PDOC00578) presernt in members of
histone-like transcription factor family; contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone
Length = 195
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 390 HEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
++++Q T LP++R++ I+K DP+V +S D L +KA
Sbjct: 54 NQREQLGNFAGQTHLPLSRVRKILKSDPEVKKISCDVPALFSKA 97
>At1g73870.1 68414.m08554 zinc finger (B-box type) family protein
Length = 392
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 255 DVDISDITEHSESYLENEHLKFALTEATEA----DNNKLEFELNSEEQVHEKKQKTE 413
D+D+ D+T ES LE E L E + + NK+ FE+N ++ K + E
Sbjct: 193 DMDLEDLTMDVESLLEEEQLCLGFKEPNDVGVIKEENKVGFEINCKDLKRVKDEDEE 249
>At1g07980.1 68414.m00869 histone-like transcription factor
(CBF/NF-Y) family protein contains Pfam profile PF00808:
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to Chromatin accessibility
complex protein 1 (CHRAC-1) (CHRAC-15) (HuCHRAC15) (DNA
polymerase epsilon subunit p15) (SP:Q9NRG0) {Homo
sapiens}
Length = 206
Score = 32.3 bits (70), Expect = 0.20
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 429 KLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
K P+ RI+ IM+ D + DAVFLV KA
Sbjct: 109 KFPMNRIRRIMRSDNSAPQIMQDAVFLVNKA 139
>At4g00760.1 68417.m00106 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 367
Score = 30.7 bits (66), Expect = 0.62
Identities = 25/104 (24%), Positives = 46/104 (44%)
Frame = +3
Query: 204 KYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEE 383
KYK Q +E D D + TE + + K L A + N LE N EE
Sbjct: 176 KYKDELGQGNKRKE-RADTDTGEHTEKNNGSDLGDQKKPKLLFADDLQNETLEAVPNIEE 234
Query: 384 QVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVT 515
+E+K TE+ ++ + + ++ M+ ++ S+++ +T
Sbjct: 235 ANNERKAPTEIKKNGESSEKKSPELVCMEEELQKWSAESFIDLT 278
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 330 EATEADNNKLEFELNSEEQVHEKKQKTEVIRST 428
E TE + + E E ++EE+ EKKQKT+ ++ T
Sbjct: 302 EETETTSTEEEKEEDAEEEDGEKKQKTKKVKET 334
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 330 EATEADNNKLEFELNSEEQVHEKKQKTEVIRST 428
E TE + + E E ++EE+ EKKQKT+ ++ T
Sbjct: 302 EETETTSTEEEKEEDAEEEDGEKKQKTKKVKET 334
>At3g20760.1 68416.m02626 hypothetical protein
Length = 373
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 252 EDVDISDITEHSESYLENEH-LKFALTEATEADNNKLEFELNSEEQVHEKKQK 407
E+ I+D YL H +K A + T+ D+NK +N E +H+K +K
Sbjct: 55 EEQGIADRRAIRSQYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRK 107
>At3g04550.1 68416.m00483 expressed protein
Length = 449
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 336 TEADNNKLEFELNSEEQVH---EKKQKTEVIRSTKLPIARIK 452
+E N+L EL +++ EKK+K E +++ ++P+ R+K
Sbjct: 253 SEKAKNRLNTELYGDKEAEKEKEKKKKEEEVKAIRIPVVRLK 294
>At5g03500.1 68418.m00306 transcriptional co-activator-related low
similarity to transcriptional co-activator CRSP33 [Homo
sapiens] GI:4220890
Length = 443
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 333 ATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVF 506
A E K+E E+ E +KK+K E+++ K+ + N KMD D F
Sbjct: 374 AYELKKKKMEMEMEMEMGEKKKKKKIELMKVDKVLKKHMANKKKMDMSTKKEDGDGEF 431
>At1g02540.1 68414.m00205 hypothetical protein
Length = 290
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 222 LQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQ 386
L+NM +EE ED D + +H E L++ + L + E + LE L+ EE+
Sbjct: 69 LENMLDEEQEEDDDRAIQQQHPEFPLQSHDSRSTLDKHMEEYADDLEKMLDEEEE 123
>At3g27670.1 68416.m03455 expressed protein
Length = 1841
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 303 NEHLKFALTEATEADN-NKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDV 479
N++ + L T A+ N LE +L+ + +HE + +R K+P ++I+ ++ + P V
Sbjct: 766 NKNCTYLLFSETNAEILNALE-DLSIKIMIHEHSVRRRYVREKKVPGSKIEKLLDVIPQV 824
>At5g10190.1 68418.m01179 transporter-related low similarity to
spinster membrane proteins from [Drosophila
melanogaster] GI:12003974, GI:12003976, GI:12003972,
GI:12003970; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 488
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 216 SSLQNMSEEECHEDVDISDITEHSESYLENEH 311
S +Q ++EEE +V EH E+YL +H
Sbjct: 453 SEMQQLNEEEDEIEVKCFGAEEHDEAYLLKQH 484
>At5g63610.1 68418.m07986 protein kinase, putative similar to
cyclin-dependent kinase cdc2MsE [Medicago sativa]
gi|1806144|emb|CAA65981; contains protein kinase domain,
Pfam:PF00069
Length = 470
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 174 YFRKRLLLHRKYKPSSLQNMSEEECHEDVDISD 272
Y ++HR KPS++ M + E H V I+D
Sbjct: 144 YLHSNWIIHRDLKPSNILVMGDAEEHGIVKIAD 176
>At1g32930.1 68414.m04056 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 399
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 327 TEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNI 485
T E + +K F LN E HE KT++ S+ + +K+D DV++
Sbjct: 188 TIEAEEEQHKDFFRLNHIEGYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHV 240
>At1g20240.1 68414.m02528 hypothetical protein
Length = 566
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 354 KLEFELNSEEQVHEKKQKT-EVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKA 521
+++ LN V++ + K+ EVI STK +R+++ K P + V D VT A
Sbjct: 490 EMKDSLNGVVHVYDMEVKSWEVIGSTKSWSSRVRDFYKFTPSLFFVEEDEQQKVTVA 546
>At1g19870.1 68414.m02492 calmodulin-binding family protein contains
Pfam profile: PF00612 IQ calmodulin-binding motif
Length = 794
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +3
Query: 267 SDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIAR 446
S ++E + + E L+ AL ++ DNN + + V EKK + V+ P+
Sbjct: 56 SVVSETTPASRTRETLESALLKSPSPDNNNVSEKQQQSFSVDEKKSQLPVVTYVAEPVDE 115
Query: 447 IKNIMKMDPDVNIVS 491
K ++ ++S
Sbjct: 116 KKTQSVIEEKTELLS 130
>At5g65080.1 68418.m08186 MADS-box family protein
Length = 205
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 252 EDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRS-- 425
E +D+ D T+ S+ E + E + DN +E ++ EEQ+ K VIR+
Sbjct: 86 ETLDLEDKTQDYLSHKELLEIVQRKIEEAKGDNVSIESLISMEEQL---KSALSVIRARK 142
Query: 426 TKLPIARIKNI 458
T+L + +KN+
Sbjct: 143 TELLMELVKNL 153
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +3
Query: 225 QNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQ 404
Q S E+ H +++ SE + E +K TEA + D NK + E +E +++
Sbjct: 199 QTESAEKSHRKENVTK----SEKPRDQEGVK--KTEAKDKDRNKEKKEEKTESINKTRQE 252
Query: 405 KTEVIRSTKL 434
K ++IR KL
Sbjct: 253 KPKLIRGPKL 262
>At1g69580.1 68414.m08003 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 332
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 294 YLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEVIR 422
+L++ K+ L ++ + D+NKLE SE Q E K + +R
Sbjct: 74 HLKSHLQKYRLGKSMKFDDNKLEVSSASENQEVESKNDSRDLR 116
>At1g13960.2 68414.m01642 WRKY family transcription factor similar
to WKRY DNA-binding protein GB:AAD17441
Length = 487
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 228 NMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEE 383
N ++ E HE V + TEH + E + T+ E D N+ + + S E
Sbjct: 299 NKTKREQHEAVSQATTTEHLSEASDGEEVGNGETDVREKDENEPDPKRRSTE 350
>At1g13960.1 68414.m01641 WRKY family transcription factor similar
to WKRY DNA-binding protein GB:AAD17441
Length = 514
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 228 NMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEE 383
N ++ E HE V + TEH + E + T+ E D N+ + + S E
Sbjct: 326 NKTKREQHEAVSQATTTEHLSEASDGEEVGNGETDVREKDENEPDPKRRSTE 377
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,358,120
Number of Sequences: 28952
Number of extensions: 137890
Number of successful extensions: 529
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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