Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304B02f
(312 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 130 8e-30
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 118 3e-26
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 112 2e-24
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 111 2e-24
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 103 6e-22
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 68 4e-11
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 68 5e-11
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 61 4e-09
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 57 7e-08
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 49 2e-05
UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102... 44 5e-04
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 44 5e-04
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 38 0.033
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 34 0.71
UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse t... 33 1.2
UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;... 32 2.2
UniRef50_Q60KI9 Cluster: Putative uncharacterized protein CBG240... 32 2.9
UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella ve... 32 2.9
UniRef50_UPI000007FEA9 Cluster: C03A7.1; n=1; Caenorhabditis ele... 30 8.7
UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum... 30 8.7
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 130 bits (313), Expect = 8e-30
Identities = 56/99 (56%), Positives = 69/99 (69%)
Frame = +2
Query: 14 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 193
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 194 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXINIV 310
N++FCP +NLDKLWTLVSEQTR+ A G P I++V
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVV 104
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 118 bits (283), Expect = 3e-26
Identities = 50/71 (70%), Positives = 58/71 (81%)
Frame = +2
Query: 98 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 277
NAGG+HHHRIN DKYHPGYFGK+GMRNFH RKN +CP +NLDKLW+LVSE+TR YA
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWSLVSEKTRTTYAEK 79
Query: 278 PDGKVPXINIV 310
D K P I++V
Sbjct: 80 KD-KAPVIDVV 89
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 112 bits (269), Expect = 2e-24
Identities = 55/100 (55%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +2
Query: 14 KKTRKLRGHVSXXXXXXXXXXXXXXXXXN--AGGEHHHRINMDKYHPGYFGKLGMRNFHF 187
KKTRKLRGHVS AGG HHHRI M+K+HPGY+GKLGMR FH
Sbjct: 6 KKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGMRTFHL 65
Query: 188 RKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXINI 307
+KN CPV+N+DKLW+LVS+ TR KYA KVP I++
Sbjct: 66 KKNPLHCPVVNIDKLWSLVSDATRQKYAE-DKKKVPVIDV 104
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 111 bits (268), Expect = 2e-24
Identities = 55/102 (53%), Positives = 65/102 (63%)
Frame = +2
Query: 2 ATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 181
AT+ KK RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR F
Sbjct: 2 ATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYF 61
Query: 182 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXINI 307
H +NK FCP++NLDKLW+LV E + K S+ D VP I++
Sbjct: 62 HKLRNKFFCPIVNLDKLWSLVPEDVKAK--SSKD-NVPLIDV 100
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 103 bits (248), Expect = 6e-22
Identities = 46/85 (54%), Positives = 53/85 (62%)
Frame = +2
Query: 5 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFH 184
T K RK RGHVS AGG+HHHRI MDKYHPGYFGK+GMR+FH
Sbjct: 54 TQLHKNRKKRGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMRHFH 113
Query: 185 FRKNKNFCPVLNLDKLWTLVSEQTR 259
KN+ CP +N+DKLWTLV + R
Sbjct: 114 KLKNQTVCPTINIDKLWTLVGTEKR 138
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 68.1 bits (159), Expect = 4e-11
Identities = 33/98 (33%), Positives = 52/98 (53%)
Frame = +2
Query: 14 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 193
KKTRKLRGHVS AGG H + ++HP Y GK GMR +H ++
Sbjct: 6 KKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRVYHRKE 65
Query: 194 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXINI 307
N ++ ++ +LW ++ ++ R + P+ KVP I++
Sbjct: 66 NSDYARPISSARLWGMIPKEQRYDFLDNPE-KVPVIDV 102
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 67.7 bits (158), Expect = 5e-11
Identities = 31/76 (40%), Positives = 42/76 (55%)
Frame = +2
Query: 5 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFH 184
T +++RK RGHVS N+GG+HHH+I +KYH +FGK GMR +
Sbjct: 3 TDIRRSRKKRGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRYYR 62
Query: 185 FRKNKNFCPVLNLDKL 232
K NF +NLDK+
Sbjct: 63 KLKQNNFNKSINLDKI 78
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 61.3 bits (142), Expect = 4e-09
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +2
Query: 107 GEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDG 286
G ++ + YFGK+GMR+FH +N +F PV+NLDKLWTLV + R K +A
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLVPAEQR-KGLTADST 135
Query: 287 KVPXIN 304
+VP I+
Sbjct: 136 EVPVID 141
Score = 50.8 bits (116), Expect = 6e-06
Identities = 24/48 (50%), Positives = 25/48 (52%)
Frame = +2
Query: 5 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 148
T KTRK RGHVS AGG+HHHR NMDKYHP
Sbjct: 3 THLSKTRKHRGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 57.2 bits (132), Expect = 7e-08
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +2
Query: 134 DKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLV 244
DK+HPG FGK+GMR+FH + K CP++++DKLW++V
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSMV 64
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +2
Query: 5 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFH 184
T KK+RK+RG S +GG+HHH+I ++Y YF K GMR ++
Sbjct: 3 TKLKKSRKMRGKNSSGHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRIYN 62
Query: 185 FRKNKN 202
K N
Sbjct: 63 LEKTLN 68
>UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102C;
n=2; Saccharomycetaceae|Rep: Putative uncharacterized
protein YGL102C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 142
Score = 44.4 bits (100), Expect = 5e-04
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = -3
Query: 268 ILQPRLFRD*CPKLI*VQNWTEILVLSKVEISHTKFAKVSRMVLVHVDXXXXXXXXXXXX 89
+L +F D CP+ + VQ+W + L VE+SHT +++ MV +HV+
Sbjct: 63 VLVSLVFWDQCPQFVQVQDWLPEMSLLLVEVSHTNLTEITWMVFIHVNSVVMLTTGHTST 122
Query: 88 XXXXXVLSDTTMS 50
VL+DTT +
Sbjct: 123 TGVLSVLTDTTFT 135
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 44.4 bits (100), Expect = 5e-04
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 5 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGK--LGMRN 178
TS+KKTR LR HVS H R + PG G +GMR
Sbjct: 3 TSRKKTRNLREHVSVG---------------------HGRFGKHRKLPGSRGNAGVGMRY 41
Query: 179 FHFRKNKNFCPVLNLDKLWTLV 244
FH +NK +C ++NLDKLW++V
Sbjct: 42 FHKLRNKFYCQIVNLDKLWSMV 63
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 38.3 bits (85), Expect = 0.033
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +2
Query: 14 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 151
+KTRK +GHVS NAGGEH HRIN PG
Sbjct: 6 RKTRKFQGHVSDSHSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 33.9 bits (74), Expect = 0.71
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 98 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 277
NAG + H +++ K++P YFGK G N+N C + L+ + E+ LKY A
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGF-------NRNPCLIKQLETINIGELEEYILKYKDA 88
Query: 278 ---PDGKV 292
+GKV
Sbjct: 89 FQVEEGKV 96
>UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retroelement reverse transcriptase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1044
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 133 GQVPSWILWQTWYEKFPL*KEQEFLSSFEL 222
GQ+P WILW W + L EQ+ +SS +L
Sbjct: 842 GQLPIWILWNLWNCRNKLIFEQKHISSMDL 871
>UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;
n=7; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 656
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 200 NFCPVLNLDKLWTLVSEQTRLKYASAPDGKV 292
NFCP L D WT++S+ + Y S+PD V
Sbjct: 116 NFCPWLEED--WTMLSDDSTTPYESSPDNSV 144
>UniRef50_Q60KI9 Cluster: Putative uncharacterized protein CBG24039;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24039 - Caenorhabditis
briggsae
Length = 991
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 122 RINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLD-KLWTLVSEQ 253
++ D+Y Y G L + FHF K C + +LD K WT++++Q
Sbjct: 894 KVLADRYKQ-YNGMLKEKKFHFDKLFEICKLTDLDKKQWTILNDQ 937
>UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 306
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -2
Query: 206 RNSCSF*SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAYGA 69
R+SC + F +C+S T PC D H +H DL+D GA
Sbjct: 108 RSSCQ--ARCFMNNLCRSYNYNTTPCQLSDSDHLEHPSDLVDKPGA 151
>UniRef50_UPI000007FEA9 Cluster: C03A7.1; n=1; Caenorhabditis
elegans|Rep: C03A7.1 - Caenorhabditis elegans
Length = 1443
Score = 30.3 bits (65), Expect = 8.7
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -2
Query: 296 RGPCHL-EQMHTSASSVQRLMSKAYLSSKLDRNSCSF*SGNFSYQVCQSIQDGTCPC*FC 120
+ PC + H+S L SKA+ + D C +G S + C+ T C FC
Sbjct: 747 KSPCRACGKRHSSLRCT--LSSKAFRQALRDTKLCPICTGRHSIERCRC----TLVCVFC 800
Query: 119 DGAHH 105
G HH
Sbjct: 801 QGMHH 805
>UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L15 - Cenarchaeum
symbiosum
Length = 138
Score = 30.3 bits (65), Expect = 8.7
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Frame = +2
Query: 2 ATSKKKTRKLRG-HVSXXXXXXXXXXXXXXXXXNAGGE-HHHRINMDKYHPGYFGKLGMR 175
AT +KTRKLRG G+ HH +M K PG+FG
Sbjct: 2 ATRNRKTRKLRGSRTHGWGQVGQHRASGHKGGVGVSGQLKHHFSSMLKEDPGHFGHDSTH 61
Query: 176 NFHFRKNKNFCPVLNLDKLWT 238
H K + V +LD T
Sbjct: 62 PPHSNAAKKWASVRDLDDFHT 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 295,746,515
Number of Sequences: 1657284
Number of extensions: 5329668
Number of successful extensions: 13070
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13056
length of database: 575,637,011
effective HSP length: 80
effective length of database: 443,054,291
effective search space used: 10190248693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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