Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304B02f
         (312 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...   130   1e-30
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...   130   1e-30
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...   130   1e-30
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...   130   1e-30
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...   130   1e-30
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...   127   8e-30
AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a ...    43   2e-04
AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.             29   2.2  

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  130 bits (313), Expect = 1e-30
 Identities = 56/99 (56%), Positives = 69/99 (69%)
 Frame = +2

Query: 14  KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 193
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65

Query: 194 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXINIV 310
           N++FCP +NLDKLWTLVSEQTR+  A    G  P I++V
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVV 104


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score =  130 bits (313), Expect = 1e-30
 Identities = 56/99 (56%), Positives = 69/99 (69%)
 Frame = +2

Query: 14  KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 193
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 5   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64

Query: 194 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXINIV 310
           N++FCP +NLDKLWTLVSEQTR+  A    G  P I++V
Sbjct: 65  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVV 103


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  130 bits (313), Expect = 1e-30
 Identities = 56/99 (56%), Positives = 69/99 (69%)
 Frame = +2

Query: 14  KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 193
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65

Query: 194 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXINIV 310
           N++FCP +NLDKLWTLVSEQTR+  A    G  P I++V
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVV 104


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score =  130 bits (313), Expect = 1e-30
 Identities = 56/99 (56%), Positives = 69/99 (69%)
 Frame = +2

Query: 14  KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 193
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65

Query: 194 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXINIV 310
           N++FCP +NLDKLWTLVSEQTR+  A    G  P I++V
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVV 104


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score =  130 bits (313), Expect = 1e-30
 Identities = 56/99 (56%), Positives = 69/99 (69%)
 Frame = +2

Query: 14  KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 193
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65

Query: 194 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXINIV 310
           N++FCP +NLDKLWTLVSEQTR+  A    G  P I++V
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVV 104


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  127 bits (306), Expect = 8e-30
 Identities = 55/99 (55%), Positives = 69/99 (69%)
 Frame = +2

Query: 14  KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 193
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++++ ++
Sbjct: 6   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYNLKR 65

Query: 194 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXINIV 310
           N++FCP +NLDKLWTLVSEQTR+  A    G  P I++V
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVV 104


>AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a
           protein.
          Length = 34

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +2

Query: 215 LNLDKLWTLVSEQTRLKYASAPDGKVPXINIV 310
           +NLDKLWTLVSEQTR+  A    G  P I++V
Sbjct: 1   VNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVV 32


>AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.
          Length = 126

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -1

Query: 168 PSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP---*LT*PLSFLVF 16
           P+LPK+PG  ++ L   W S    P P G +    + PCP       PL FLV+
Sbjct: 55  PALPKWPGHLMAELQGPWLSLAHCPSPSGPI----VLPCPFRVQFEPPLQFLVW 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,249,303
Number of Sequences: 237096
Number of extensions: 862372
Number of successful extensions: 1966
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1959
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)