Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304A12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   6.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.7  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 218 SLPNSKCLLTSACVAHSENSKTTSKIKNTRQG 123
           S PN   ++TS+     E  +  S I NTR G
Sbjct: 59  SPPNENLVVTSSNRPWWERYQPVSYILNTRSG 90


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 218 SLPNSKCLLTSACVAHSENSKTTSKIKNTRQG 123
           S PN   ++TS+     E  +  S I NTR G
Sbjct: 60  SPPNENLVVTSSNRPWWERYQPVSYILNTRSG 91


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 218 SLPNSKCLLTSACVAHSENSKTTSKIKNTRQG 123
           S PN   ++TS+     E  +  S I NTR G
Sbjct: 60  SPPNENLVVTSSNRPWWERYQPVSYILNTRSG 91


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 249 FDSLSRSCRRRSTQLSYIL 305
           ++ L R C+R   ++SYI+
Sbjct: 273 YNRLCRLCKRVDEEISYIV 291


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 249 FDSLSRSCRRRSTQLSYIL 305
           ++ L R C+R   ++SYI+
Sbjct: 273 YNRLCRLCKRVDEEISYIV 291


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 249 FDSLSRSCRRRSTQLSYIL 305
           ++ L R C+R   ++SYI+
Sbjct: 273 YNRLCRLCKRVDEEISYIV 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,970
Number of Sequences: 336
Number of extensions: 1795
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)