Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304A11f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7K0W4 Cluster: LD27203p; n=7; Endopterygota|Rep: LD272...    44   0.003
UniRef50_UPI00015B5505 Cluster: PREDICTED: hypothetical protein;...    35   0.98 
UniRef50_Q6D8Y7 Cluster: Putative uncharacterized protein; n=2; ...    35   0.98 
UniRef50_A0NGE8 Cluster: ENSANGP00000011769; n=6; Culicidae|Rep:...    35   0.98 
UniRef50_Q9W512 Cluster: CG17777-PA; n=1; Drosophila melanogaste...    34   1.7  
UniRef50_Q4LEQ7 Cluster: Glycine rich protein; n=6; Endopterygot...    34   1.7  
UniRef50_Q9V3Z9 Cluster: CG16884-PA; n=2; Sophophora|Rep: CG1688...    34   2.3  
UniRef50_Q7S612 Cluster: Putative uncharacterized protein NCU056...    34   2.3  
UniRef50_UPI00015B4096 Cluster: PREDICTED: hypothetical protein;...    33   3.0  
UniRef50_Q4RSU4 Cluster: DNA polymerase; n=1; Tetraodon nigrovir...    32   6.9  
UniRef50_Q6YH51 Cluster: Neurofilament triplet H1-like protein; ...    32   6.9  

>UniRef50_Q7K0W4 Cluster: LD27203p; n=7; Endopterygota|Rep: LD27203p
           - Drosophila melanogaster (Fruit fly)
          Length = 328

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 22/47 (46%), Positives = 24/47 (51%)
 Frame = +3

Query: 381 RRCXVPYTVEKHVPYTXXXXXXXXXXXXXXXXXTVEKKVPFTVKEYV 521
           ++  VPYTV KHVPYT                  VEKKVP  VKEYV
Sbjct: 61  KKIPVPYTVTKHVPYTVEKKIPYEVKVDVPQPYIVEKKVPVHVKEYV 107


>UniRef50_UPI00015B5505 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 420

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = +3

Query: 396 PYTVEKHVPYTXXXXXXXXXXXXXXXXXTVEKKVPFTVK 512
           PY VEKHVPY                  TVEK+VP+ VK
Sbjct: 293 PYPVEKHVPYPVKVPVPAPYPVEKKVPYTVEKEVPYPVK 331


>UniRef50_Q6D8Y7 Cluster: Putative uncharacterized protein; n=2;
           Gammaproteobacteria|Rep: Putative uncharacterized
           protein - Erwinia carotovora subsp. atroseptica
           (Pectobacterium atrosepticum)
          Length = 814

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -3

Query: 498 ELSFQRCRAEVRALSPHRVLSSRRYRGRVSRLYTEQXTFFTTSTV 364
           EL FQRC  E  ALS + +LS    + R + L++E  T   T++V
Sbjct: 235 ELFFQRCYCESGALSKYALLSKEMLKARYAALFSESETSPKTTSV 279


>UniRef50_A0NGE8 Cluster: ENSANGP00000011769; n=6; Culicidae|Rep:
           ENSANGP00000011769 - Anopheles gambiae str. PEST
          Length = 193

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
 Frame = +2

Query: 5   MKYTVILVASLAVVAFA---KEEKGTPKAVE---EKKQDKRGIYDIG-SYGGHNF 148
           MK  V+ V ++A+VA A   K++   P   E   EKKQ+KRG++D+G  Y  H +
Sbjct: 1   MKGFVVFVMAIALVASAEIKKKDAEAPAEAEANGEKKQEKRGLWDLGYGYESHGW 55


>UniRef50_Q9W512 Cluster: CG17777-PA; n=1; Drosophila
           melanogaster|Rep: CG17777-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 96

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +2

Query: 74  PKAVEEKKQDKRGIYDIG-SYGGH 142
           P AV+EKK +KRGIY  G  YGG+
Sbjct: 19  PSAVDEKKTEKRGIYGFGHGYGGY 42


>UniRef50_Q4LEQ7 Cluster: Glycine rich protein; n=6;
           Endopterygota|Rep: Glycine rich protein - Bombyx mori
           (Silk moth)
          Length = 359

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +3

Query: 381 RRCXVPYTVEKHVPYTXXXXXXXXXXXXXXXXXTVEKKVPFTVKEYV 521
           ++  VPY VEKH+PY                   V K VP+ VKE V
Sbjct: 91  KKVPVPYPVEKHIPYPVEKKIPYPVKVHVPQPYPVVKHVPYPVKEIV 137


>UniRef50_Q9V3Z9 Cluster: CG16884-PA; n=2; Sophophora|Rep:
           CG16884-PA - Drosophila melanogaster (Fruit fly)
          Length = 277

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +2

Query: 5   MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 142
           MK  + L A L   A A + +G  K   EKK DKRG+ D+G   GH
Sbjct: 1   MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45


>UniRef50_Q7S612 Cluster: Putative uncharacterized protein
           NCU05648.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU05648.1 - Neurospora crassa
          Length = 780

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 254 SCSFRLRNRVLLGDRS*YLRALHSFRDRRSLHRYLRNYVLHKILCHRCPFCLV 96
           SC FR+RN V    R   + A+ SF     L  ++ +Y   + + H+C  C V
Sbjct: 228 SCPFRVRNPVRFNIRDHEVCAMTSFESLADLRHHVMSYHRRRAMPHQCQRCKV 280


>UniRef50_UPI00015B4096 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 127

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 19/43 (44%), Positives = 29/43 (67%)
 Frame = +2

Query: 14  TVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 142
           T+IL+A +A VA     +   +A+E KKQ+KRG+  +G YGG+
Sbjct: 3   TIILIAIIAAVASPIYAE---EALEPKKQEKRGLLGLG-YGGY 41


>UniRef50_Q4RSU4 Cluster: DNA polymerase; n=1; Tetraodon
            nigroviridis|Rep: DNA polymerase - Tetraodon nigroviridis
            (Green puffer)
          Length = 1768

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 182  FRDRRSLHRYLRNYVLHKILCHRCPFC 102
            F D    H    +Y+L +++CH C FC
Sbjct: 1675 FSDEAQFHDPCNSYILPEVICHHCNFC 1701


>UniRef50_Q6YH51 Cluster: Neurofilament triplet H1-like protein;
           n=3; Ranavirus|Rep: Neurofilament triplet H1-like
           protein - Ambystoma tigrinum stebbensi virus
          Length = 275

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 427 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRN 516
           P RRK PM  + P    +PLKRK PL  R+
Sbjct: 220 PLRRKSPMNKRSPVKRKSPLKRKSPLKKRS 249


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,120,476
Number of Sequences: 1657284
Number of extensions: 6629011
Number of successful extensions: 22091
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22029
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)