Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304A11f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069544-1|AAL39689.1| 328|Drosophila melanogaster LD27203p pro... 44 2e-04
AE013599-2451|AAF57876.1| 328|Drosophila melanogaster CG30101-P... 44 2e-04
AE014298-356|AAF45746.1| 96|Drosophila melanogaster CG17777-PA... 34 0.10
BT010220-1|AAQ23538.1| 277|Drosophila melanogaster RH05666p pro... 34 0.13
AY061007-1|AAL28555.1| 277|Drosophila melanogaster HL02234p pro... 34 0.13
AE014134-2434|AAF53359.1| 277|Drosophila melanogaster CG16884-P... 34 0.13
AY070658-1|AAL48129.1| 270|Drosophila melanogaster RH04334p pro... 29 3.8
AE014134-2433|AAF53358.2| 270|Drosophila melanogaster CG16885-P... 29 3.8
AE014134-2432|AAN10857.1| 156|Drosophila melanogaster CG16885-P... 29 3.8
AY128487-1|AAM75080.1| 170|Drosophila melanogaster RE73921p pro... 29 5.1
AE014298-2527|AAF48701.1| 170|Drosophila melanogaster CG5010-PA... 29 5.1
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 28 6.7
>AY069544-1|AAL39689.1| 328|Drosophila melanogaster LD27203p
protein.
Length = 328
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +3
Query: 381 RRCXVPYTVEKHVPYTXXXXXXXXXXXXXXXXXTVEKKVPFTVKEYV 521
++ VPYTV KHVPYT VEKKVP VKEYV
Sbjct: 61 KKIPVPYTVTKHVPYTVEKKIPYEVKVDVPQPYIVEKKVPVHVKEYV 107
Score = 26.2 bits (55), Expect(2) = 0.60
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 396 PYTVEKHVPYT 428
PYTVEK VPYT
Sbjct: 256 PYTVEKKVPYT 266
Score = 24.2 bits (50), Expect(2) = 0.60
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 480 TVEKKVPFTVKEYV 521
TVEKKVP+TV++ V
Sbjct: 258 TVEKKVPYTVEKPV 271
>AE013599-2451|AAF57876.1| 328|Drosophila melanogaster CG30101-PA
protein.
Length = 328
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +3
Query: 381 RRCXVPYTVEKHVPYTXXXXXXXXXXXXXXXXXTVEKKVPFTVKEYV 521
++ VPYTV KHVPYT VEKKVP VKEYV
Sbjct: 61 KKIPVPYTVTKHVPYTVEKKIPYEVKVDVPQPYIVEKKVPVHVKEYV 107
Score = 26.2 bits (55), Expect(2) = 0.60
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 396 PYTVEKHVPYT 428
PYTVEK VPYT
Sbjct: 256 PYTVEKKVPYT 266
Score = 24.2 bits (50), Expect(2) = 0.60
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 480 TVEKKVPFTVKEYV 521
TVEKKVP+TV++ V
Sbjct: 258 TVEKKVPYTVEKPV 271
>AE014298-356|AAF45746.1| 96|Drosophila melanogaster CG17777-PA
protein.
Length = 96
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 74 PKAVEEKKQDKRGIYDIG-SYGGH 142
P AV+EKK +KRGIY G YGG+
Sbjct: 19 PSAVDEKKTEKRGIYGFGHGYGGY 42
>BT010220-1|AAQ23538.1| 277|Drosophila melanogaster RH05666p
protein.
Length = 277
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 5 MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 142
MK + L A L A A + +G K EKK DKRG+ D+G GH
Sbjct: 1 MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45
>AY061007-1|AAL28555.1| 277|Drosophila melanogaster HL02234p
protein.
Length = 277
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 5 MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 142
MK + L A L A A + +G K EKK DKRG+ D+G GH
Sbjct: 1 MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45
>AE014134-2434|AAF53359.1| 277|Drosophila melanogaster CG16884-PA
protein.
Length = 277
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 5 MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 142
MK + L A L A A + +G K EKK DKRG+ D+G GH
Sbjct: 1 MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45
>AY070658-1|AAL48129.1| 270|Drosophila melanogaster RH04334p
protein.
Length = 270
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 381 RRCXVPYTVEKHVPYTXXXXXXXXXXXXXXXXXTVEKKVPFTVKEYV 521
R VPY VE+HVPY VEK V VK+ V
Sbjct: 88 RTVQVPYQVERHVPYPVEKTVTYPVKVPVPQPYPVEKIVHVPVKQIV 134
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = +2
Query: 23 LVASLAVVAFAKEEKGTPKAVE-----EKKQDKRGIYDIGSYG 136
LVA +VA A EE KAVE EKKQ+KRGI YG
Sbjct: 9 LVAMCVLVANASEE-APKKAVETAEPAEKKQEKRGIGHGLGYG 50
>AE014134-2433|AAF53358.2| 270|Drosophila melanogaster CG16885-PA,
isoform A protein.
Length = 270
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 381 RRCXVPYTVEKHVPYTXXXXXXXXXXXXXXXXXTVEKKVPFTVKEYV 521
R VPY VE+HVPY VEK V VK+ V
Sbjct: 88 RTVQVPYQVERHVPYPVEKTVTYPVKVPVPQPYPVEKIVHVPVKQIV 134
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = +2
Query: 23 LVASLAVVAFAKEEKGTPKAVE-----EKKQDKRGIYDIGSYG 136
LVA +VA A EE KAVE EKKQ+KRGI YG
Sbjct: 9 LVAMCVLVANASEE-APKKAVETAEPAEKKQEKRGIGHGLGYG 50
>AE014134-2432|AAN10857.1| 156|Drosophila melanogaster CG16885-PB,
isoform B protein.
Length = 156
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 381 RRCXVPYTVEKHVPYTXXXXXXXXXXXXXXXXXTVEKKVPFTVKEYV 521
R VPY VE+HVPY VEK V VK+ V
Sbjct: 88 RTVQVPYQVERHVPYPVEKTVTYPVKVPVPQPYPVEKIVHVPVKQIV 134
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = +2
Query: 23 LVASLAVVAFAKEEKGTPKAVE-----EKKQDKRGIYDIGSYG 136
LVA +VA A EE KAVE EKKQ+KRGI YG
Sbjct: 9 LVAMCVLVANASEE-APKKAVETAEPAEKKQEKRGIGHGLGYG 50
>AY128487-1|AAM75080.1| 170|Drosophila melanogaster RE73921p
protein.
Length = 170
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 403 QSRNTSPIPS-RRKYPMR*KCPYLSPTPLKRKFPLPS 510
+ R+ SP PS RR P++ + P +P P++ + P P+
Sbjct: 4 RGRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPA 40
>AE014298-2527|AAF48701.1| 170|Drosophila melanogaster CG5010-PA
protein.
Length = 170
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 403 QSRNTSPIPS-RRKYPMR*KCPYLSPTPLKRKFPLPS 510
+ R+ SP PS RR P++ + P +P P++ + P P+
Sbjct: 4 RGRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPA 40
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -1
Query: 188 HSFRDRRSLHRYLRNYVLHKILCHRCPFCLVSSLRLPSVCLSPPWQRQPRPT 33
H RD S+H H L HR P + S SPP Q+ PRP+
Sbjct: 472 HQLRDCTSMHSCFTCKGRHHTLLHRSP----PNSENASSSTSPPTQQLPRPS 519
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,045,387
Number of Sequences: 53049
Number of extensions: 321430
Number of successful extensions: 838
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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