Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304A09f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 29 0.025
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 28 0.044
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 28 0.044
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 24 0.71
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 24 0.71
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 23 1.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 3.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 3.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 3.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 3.8
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 3.8
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 6.6
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 29.1 bits (62), Expect = 0.025
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 314 PRFDEGRPVTFGTVDDEGRIVAYPDYSWHENQGQNCGGLTSVFRVAIDECN 466
P+ E P T + D RI A WHE + L SVFR+ D+C+
Sbjct: 283 PQITELEPETIESQDAITRIYAIATM-WHETPEEMMEFLKSVFRLDQDQCS 332
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 28.3 bits (60), Expect = 0.044
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 314 PRFDEGRPVTFGTVDDEGRIVAYPDYSWHENQGQNCGGLTSVFRVAIDECN 466
P+ E P T + D RI A WHE + L SVFR+ D+C+
Sbjct: 516 PQITELEPETIESQDAITRIYACGTM-WHETPEEMMEFLKSVFRLDQDQCS 565
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 0.044
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 314 PRFDEGRPVTFGTVDDEGRIVAYPDYSWHENQGQNCGGLTSVFRVAIDECN 466
P+ E P T + D RI A WHE + L SVFR+ D+C+
Sbjct: 516 PQITELEPETIESQDAITRIYACGTM-WHETPEEMMEFLKSVFRLDQDQCS 565
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 24.2 bits (50), Expect = 0.71
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 162 GNGRNWSSCFRTKKLGHMH*RNDF 233
GN ++W+ F+ K G+ R DF
Sbjct: 190 GNAKHWTGIFQKKWRGYEDFRRDF 213
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 24.2 bits (50), Expect = 0.71
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -1
Query: 371 YVPRRLQFQMSQDVLRQNEVLSQISAIFYL 282
+VPRR+ F + ++ R+N + + +F +
Sbjct: 331 FVPRRVPFDLFENKKRKNNIKLYVRRVFIM 360
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 23.0 bits (47), Expect = 1.6
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -3
Query: 372 IRPSSSTVPNVTGRPSSKRGIVTNIRDFLPDLC 274
+ P V VT +PSS + RD LC
Sbjct: 390 VEPVPQPVEEVTQKPSSTKAPAPPSRDLTTTLC 422
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 395 WHENQGQNCGGLTSVFRVAIDECNR 469
WHEN+ + L S+ R+ D+ R
Sbjct: 570 WHENKEEMMEFLKSILRLDEDQSAR 594
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 395 WHENQGQNCGGLTSVFRVAIDECNR 469
WHEN+ + L S+ R+ D+ R
Sbjct: 570 WHENKEEMMEFLKSILRLDEDQSAR 594
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 395 WHENQGQNCGGLTSVFRVAIDECNR 469
WHEN+ + L S+ R+ D+ R
Sbjct: 570 WHENKEEMMEFLKSILRLDEDQSAR 594
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 395 WHENQGQNCGGLTSVFRVAIDECNR 469
WHEN+ + L S+ R+ D+ R
Sbjct: 570 WHENKEEMMEFLKSILRLDEDQSAR 594
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 3.8
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = -1
Query: 200 LRSETRTPVPPIASPRGDYSSLRDRANSTPN----NMTVEKT 87
++S+ P P I SP +S ++ PN NM +++T
Sbjct: 412 MQSQIINPQPQITSPSNTNTSTSSTNSNKPNSSDLNMLIKET 453
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 126 GQQHAKQYDSRKNR 85
GQQH Q DSR +
Sbjct: 23 GQQHGPQSDSRNQQ 36
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,611
Number of Sequences: 336
Number of extensions: 3071
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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