Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304A09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41546-4|AAC48218.1| 150|Caenorhabditis elegans Hypothetical pr... 29 2.7
CU457743-1|CAM36364.1| 692|Caenorhabditis elegans Hypothetical ... 29 2.7
Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 28 3.5
U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 28 3.5
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 28 4.7
U97406-2|AAC24293.2| 253|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL032675-1|CAA21779.1| 963|Caenorhabditis elegans Hypothetical ... 28 4.7
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 27 6.2
AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell death-re... 27 6.2
AC024791-9|AAF60653.1| 382|Caenorhabditis elegans Cell-death-re... 27 6.2
Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical p... 27 8.1
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 27 8.1
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 27 8.1
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 27 8.1
U80452-12|AAB37851.1| 195|Caenorhabditis elegans Hypothetical p... 27 8.1
AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical ... 27 8.1
AL022473-1|CAJ43448.1| 339|Caenorhabditis elegans Hypothetical ... 27 8.1
AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear recep... 27 8.1
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 27 8.1
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 27 8.1
>U41546-4|AAC48218.1| 150|Caenorhabditis elegans Hypothetical
protein T25B6.3 protein.
Length = 150
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 41 QLLNAFKLEMSYGIERFFLLSYCLACCWPGLGAKNNLRVVRQWAELEFV 187
+L N K++MS + F + CW L KN L +W ++EF+
Sbjct: 32 ELNNLAKVDMSSASKELFQ-EFMSTLCWNNLTPKNFLENYIRWEKVEFL 79
>CU457743-1|CAM36364.1| 692|Caenorhabditis elegans Hypothetical
protein K09E10.1 protein.
Length = 692
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/77 (25%), Positives = 40/77 (51%)
Frame = +2
Query: 26 LPEDPQLLNAFKLEMSYGIERFFLLSYCLACCWPGLGAKNNLRVVRQWAELEFVFPNEEA 205
L E QLLN+ K + ++ + RFF+ +A + + +N+ ++ ++L+ PN +
Sbjct: 523 LDEFVQLLNSSKPDYAFLLTRFFV----IANPFTDVNTENDEIYIQMKSQLKKFLPNIKK 578
Query: 206 RSYALEKRFYVPGSSVP 256
+ Y L+ V G +P
Sbjct: 579 KLYILDSFPRVHGDVIP 595
>Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical
protein E02H4.1 protein.
Length = 664
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -3
Query: 228 RFSNAYDRASSFGNTNSSSAHCLTTRRLFFAPRPGQQHAK 109
R+ + R++ +TN+++ +CLTT + + Q+H K
Sbjct: 493 RYPKPWKRSAWCDSTNTTTLNCLTTEGAKLSTKENQKHCK 532
>U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein.
Length = 664
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -3
Query: 228 RFSNAYDRASSFGNTNSSSAHCLTTRRLFFAPRPGQQHAK 109
R+ + R++ +TN+++ +CLTT + + Q+H K
Sbjct: 493 RYPKPWKRSAWCDSTNTTTLNCLTTEGAKLSTKENQKHCK 532
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +3
Query: 78 ESSGFFYCHIVWRAVGPVSERRIISAW*GNGRNWSSCFRTKKLGHMH*RNDFTYPGPR 251
ES F H + P S +I W G+ R+W C RT G D P PR
Sbjct: 580 ESRSMFCHHGACVRLAPESLTKIDGQW-GDWRSWGECSRTCGGGVQKGLRDCDSPKPR 636
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +3
Query: 78 ESSGFFYCHIVWRAVGPVSERRIISAW*GNGRNWSSCFRTKKLGHMH*RNDFTYPGPR 251
ES F H + P S +I W G+ R+W C RT G D P PR
Sbjct: 580 ESRSMFCHHGACVRLAPESLTKIDGQW-GDWRSWGECSRTCGGGVQKGLRDCDSPKPR 636
>U97406-2|AAC24293.2| 253|Caenorhabditis elegans Hypothetical
protein F40E3.2 protein.
Length = 253
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 205 SFFVRKHELQF-RPLPHHAEIILRSETGPTARQTI*Q*KKPLDSVRHFQ 62
S F++K L F + + + E + R E GP ARQT+ PL V+ FQ
Sbjct: 170 SEFIKKGYLAFTKSVNENDEEVFRYEWGPAARQTV----DPLALVQTFQ 214
>AL032675-1|CAA21779.1| 963|Caenorhabditis elegans Hypothetical
protein VT23B5.1 protein.
Length = 963
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -3
Query: 300 IRDFLPDLCCTSTSIGTEDPGT*NRFSNAYDRASSFGNTNSSSAHCLTT 154
+ D L +CC + + T T D S GNT + CLT+
Sbjct: 455 VMDLLKKICCDNLQVNTSKNDT--IIDAILDNISESGNTRKTQIACLTS 501
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical protein
ZK829.2 protein.
Length = 905
Score = 27.5 bits (58), Expect = 6.2
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Frame = -1
Query: 350 FQMSQDVLRQNEVLSQI---SAIFYLTYVARR----HQLAPRTRVRKIVSLMHMTELLRS 192
FQ +V+ Q E+ + I + I V+RR + L P + +I S MH E
Sbjct: 809 FQYRIEVMNQAELETFIRDPAKIHSSAEVSRRFPVVNPLEPCRSLAQISSQMHTAEYADP 868
Query: 191 ETRTPVPPIASPRGDYSSLRDRANSTPNNMTVEKTAR 81
++ P + +G+ S ++ TPN+ EK+ R
Sbjct: 869 PGKSNKSPQVAAKGELPSAAPPSSRTPNSDISEKSDR 905
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 27.5 bits (58), Expect = 6.2
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Frame = -1
Query: 350 FQMSQDVLRQNEVLSQI---SAIFYLTYVARR----HQLAPRTRVRKIVSLMHMTELLRS 192
FQ +V+ Q E+ + I + I V+RR + L P + +I S MH E
Sbjct: 529 FQYRIEVMNQAELETFIRDPAKIHSSAEVSRRFPVVNPLEPCRSLAQISSQMHTAEYADP 588
Query: 191 ETRTPVPPIASPRGDYSSLRDRANSTPNNMTVEKTAR 81
++ P + +G+ S ++ TPN+ EK+ R
Sbjct: 589 PGKSNKSPQVAAKGELPSAAPPSSRTPNSDISEKSDR 625
>AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell
death-related nuclease 1 protein.
Length = 382
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 65 EMSYGIERFFLLSYCLACCW----PGLGAKNNLRVVRQWAELEFVFPNEEARSY 214
EM +E F L L C + G+G K + ++RQ +E + N + Y
Sbjct: 215 EMKLSVEEFIDLCILLGCDYCGTIRGVGPKKAVELIRQHKNIETILENIDQNKY 268
>AC024791-9|AAF60653.1| 382|Caenorhabditis elegans
Cell-death-related nuclease protein1 protein.
Length = 382
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 65 EMSYGIERFFLLSYCLACCW----PGLGAKNNLRVVRQWAELEFVFPNEEARSY 214
EM +E F L L C + G+G K + ++RQ +E + N + Y
Sbjct: 215 EMKLSVEEFIDLCILLGCDYCGTIRGVGPKKAVELIRQHKNIETILENIDQNKY 268
>Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 23 NLPEDPQLLNAFKLEMSYGIER 88
NL ++P+LL+ F+ EMSY R
Sbjct: 180 NLLDEPELLDGFRSEMSYRATR 201
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -1
Query: 200 LRSETRTPVPPIASPRGDYSSLRDRANSTPN--NMTVEKTARFRTT 69
L +E +PVP SP ++ + RA TPN V T R R T
Sbjct: 72 LLNEPMSPVPGAKSPVRGRATSQKRATETPNISQQVVNATRRSRRT 117
>Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 323 QNEVLSQISAIFYLTYVARRHQLAPRTRVRKIVSLMHMTELLRSETRTPVP-PIASPRGD 147
+N++L A YLT + RRH L + R I M +E+ + RT + SP
Sbjct: 586 ENKILLGSVAKRYLTMLLRRHVLVNQQDSRNI-GRMTPSEIFNTIRRTSMRLSRRSPSRR 644
Query: 146 YSSLRDRANSTP 111
+S + R NS P
Sbjct: 645 SNSSQTRENSVP 656
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 323 QNEVLSQISAIFYLTYVARRHQLAPRTRVRKIVSLMHMTELLRSETRTPVP-PIASPRGD 147
+N++L A YLT + RRH L + R I M +E+ + RT + SP
Sbjct: 617 ENKILLGSVAKRYLTMLLRRHVLVNQQDSRNI-GRMTPSEIFNTIRRTSMRLSRRSPSRR 675
Query: 146 YSSLRDRANSTP 111
+S + R NS P
Sbjct: 676 SNSSQTRENSVP 687
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 323 QNEVLSQISAIFYLTYVARRHQLAPRTRVRKIVSLMHMTELLRSETRTPVP-PIASPRGD 147
+N++L A YLT + RRH L + R I M +E+ + RT + SP
Sbjct: 622 ENKILLGSVAKRYLTMLLRRHVLVNQQDSRNI-GRMTPSEIFNTIRRTSMRLSRRSPSRR 680
Query: 146 YSSLRDRANSTP 111
+S + R NS P
Sbjct: 681 SNSSQTRENSVP 692
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 323 QNEVLSQISAIFYLTYVARRHQLAPRTRVRKIVSLMHMTELLRSETRTPVP-PIASPRGD 147
+N++L A YLT + RRH L + R I M +E+ + RT + SP
Sbjct: 586 ENKILLGSVAKRYLTMLLRRHVLVNQQDSRNI-GRMTPSEIFNTIRRTSMRLSRRSPSRR 644
Query: 146 YSSLRDRANSTP 111
+S + R NS P
Sbjct: 645 SNSSQTRENSVP 656
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 323 QNEVLSQISAIFYLTYVARRHQLAPRTRVRKIVSLMHMTELLRSETRTPVP-PIASPRGD 147
+N++L A YLT + RRH L + R I M +E+ + RT + SP
Sbjct: 617 ENKILLGSVAKRYLTMLLRRHVLVNQQDSRNI-GRMTPSEIFNTIRRTSMRLSRRSPSRR 675
Query: 146 YSSLRDRANSTP 111
+S + R NS P
Sbjct: 676 SNSSQTRENSVP 687
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 323 QNEVLSQISAIFYLTYVARRHQLAPRTRVRKIVSLMHMTELLRSETRTPVP-PIASPRGD 147
+N++L A YLT + RRH L + R I M +E+ + RT + SP
Sbjct: 622 ENKILLGSVAKRYLTMLLRRHVLVNQQDSRNI-GRMTPSEIFNTIRRTSMRLSRRSPSRR 680
Query: 146 YSSLRDRANSTP 111
+S + R NS P
Sbjct: 681 SNSSQTRENSVP 692
>U80452-12|AAB37851.1| 195|Caenorhabditis elegans Hypothetical
protein C16C8.7 protein.
Length = 195
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -2
Query: 274 LHVDINWHRGPGY--VKSFL*CI*P-SFFVRKHELQFRPLPHHAEIILRSETGPT 119
+HV++N+ R PG+ V F+ + P +F+ + ++ R P RS+ PT
Sbjct: 137 MHVEVNFVRAPGHYVVVKFILQLNPKTFYWQVRHMRMRDTPSGLARFFRSQQMPT 191
>AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 23 NLPEDPQLLNAFKLEMSYGIER 88
NL ++P+LL+ F+ EMSY R
Sbjct: 180 NLLDEPELLDGFRSEMSYRATR 201
>AL022473-1|CAJ43448.1| 339|Caenorhabditis elegans Hypothetical
protein H27C11.1b protein.
Length = 339
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 23 NLPEDPQLLNAFKLEMSYGIER 88
NL ++P+LL+ F+ EMSY R
Sbjct: 80 NLLDEPELLDGFRSEMSYRATR 101
>AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear receptor
NHR-97 protein.
Length = 439
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 23 NLPEDPQLLNAFKLEMSYGIER 88
NL ++P+LL+ F+ EMSY R
Sbjct: 180 NLLDEPELLDGFRSEMSYRATR 201
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 323 QNEVLSQISAIFYLTYVARRHQLAPRTRVRKIVSLMHMTELLRSETRTPVP-PIASPRGD 147
+N++L A YLT + RRH L + R I M +E+ + RT + SP
Sbjct: 622 ENKILLGSVAKRYLTMLLRRHVLVNQQDSRNI-GRMTPSEIFNTIRRTSMRLSRRSPSRR 680
Query: 146 YSSLRDRANSTP 111
+S + R NS P
Sbjct: 681 SNSSQTRENSVP 692
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 323 QNEVLSQISAIFYLTYVARRHQLAPRTRVRKIVSLMHMTELLRSETRTPVP-PIASPRGD 147
+N++L A YLT + RRH L + R I M +E+ + RT + SP
Sbjct: 586 ENKILLGSVAKRYLTMLLRRHVLVNQQDSRNI-GRMTPSEIFNTIRRTSMRLSRRSPSRR 644
Query: 146 YSSLRDRANSTP 111
+S + R NS P
Sbjct: 645 SNSSQTRENSVP 656
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,971,526
Number of Sequences: 27780
Number of extensions: 294341
Number of successful extensions: 849
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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