Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304A08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025715-2|AAK68447.2|  439|Caenorhabditis elegans Hypothetical ...    31   0.50 
Z79695-3|CAE17789.1|  162|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U00036-15|AAK29857.1|  731|Caenorhabditis elegans Hypothetical p...    28   4.7  
AF143148-1|AAD37914.1|  315|Caenorhabditis elegans R151.8B prote...    28   4.7  
U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    27   8.1  
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    27   8.1  

>AC025715-2|AAK68447.2|  439|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.6 protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +2

Query: 41  F*YFIKISQQNFNI-ICFQKRYLHGSVLCLQTKGSFVRT-DLTLRSDARNRILEINVC 208
           F  F KIS +N N      K+ +   +L LQTKG FVR  D T+RSD  N  ++I +C
Sbjct: 279 FQIFPKISTKNPNFPFQIDKKSVMKCLLALQTKG-FVRLFDTTVRSDNINHQIQI-IC 334


>Z79695-3|CAE17789.1|  162|Caenorhabditis elegans Hypothetical
           protein F27D4.7 protein.
          Length = 162

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -3

Query: 300 QDFVNLFICPSTALFARSFLMKKIRR*KMCVHTLISSILFRAS 172
           Q FV LFI    A F  S+L+   +    C+ T IS+IL  +S
Sbjct: 43  QSFVGLFILSIIASFCGSYLLLLTKITGFCIMTSISAILSLSS 85


>Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical
           protein C36A4.5 protein.
          Length = 954

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -2

Query: 313 RLFVTRFC*FIYMSLHGFVCTKFSHEKNP 227
           R+F++RFC F+Y+    F+  +FS +K P
Sbjct: 58  RVFLSRFCLFVYL----FILARFSLKKMP 82


>U00036-15|AAK29857.1|  731|Caenorhabditis elegans Hypothetical
           protein R151.8 protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -1

Query: 317 TTIVRNKILLIYLYVPPRLCLHEVFS*KKSD-VKKCVYIH*FPV----FYFERQNAASNP 153
           T +VR    L+ +  PP   L   FS KK D V   +YIH  P       F RQ    NP
Sbjct: 192 TVVVRAGRKLVTIKTPPCPALCRYFSVKKGDKVPNDLYIHLEPTSNGDHVFMRQR-NQNP 250

Query: 152 FVR 144
           F+R
Sbjct: 251 FLR 253


>AF143148-1|AAD37914.1|  315|Caenorhabditis elegans R151.8B protein
           protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -1

Query: 317 TTIVRNKILLIYLYVPPRLCLHEVFS*KKSD-VKKCVYIH*FPV----FYFERQNAASNP 153
           T +VR    L+ +  PP   L   FS KK D V   +YIH  P       F RQ    NP
Sbjct: 192 TVVVRAGRKLVTIKTPPCPALCRYFSVKKGDKVPNDLYIHLEPTSNGDHVFMRQR-NQNP 250

Query: 152 FVR 144
           F+R
Sbjct: 251 FLR 253


>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 194 EINVCTHIF*RRIFFMRKLRAN 259
           E+NV  HIF R+ F ++KL  N
Sbjct: 92  EVNVANHIFSRKTFTIKKLYLN 113


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 194 EINVCTHIF*RRIFFMRKLRAN 259
           E+NV  HIF R+ F ++KL  N
Sbjct: 92  EVNVANHIFSRKTFTIKKLYLN 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,057,227
Number of Sequences: 27780
Number of extensions: 187585
Number of successful extensions: 447
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)