Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304A07f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E46238 Cluster: PREDICTED: similar to chaperonin... 58 9e-08
UniRef50_P40227 Cluster: T-complex protein 1 subunit zeta; n=71;... 58 1e-07
UniRef50_UPI00005A1481 Cluster: PREDICTED: similar to T-complex ... 55 1e-06
UniRef50_P46550 Cluster: T-complex protein 1 subunit zeta; n=22;... 51 2e-05
UniRef50_Q2GQ09 Cluster: Putative uncharacterized protein; n=2; ... 50 3e-05
UniRef50_P39079 Cluster: T-complex protein 1 subunit zeta; n=50;... 42 0.009
UniRef50_A2DR42 Cluster: Chaperonin subunit zeta CCTzeta; n=2; T... 41 0.015
UniRef50_Q9GYV7 Cluster: Chaperonin-containing TCP-1, zeta subun... 36 0.56
UniRef50_Q7R133 Cluster: GLP_12_22978_24657; n=9; Eukaryota|Rep:... 36 0.74
UniRef50_Q29236 Cluster: T-complex protein 1 subunit zeta; n=15;... 36 0.74
UniRef50_Q4YYM6 Cluster: Chaperone, putative; n=4; Plasmodium (V... 35 1.3
UniRef50_Q1DKZ2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_UPI0000583E60 Cluster: PREDICTED: similar to Bindin; n=... 32 9.2
UniRef50_Q8CFU0 Cluster: RIKEN cDNA 1110012D08 gene; n=9; Tetrap... 32 9.2
>UniRef50_UPI0000E46238 Cluster: PREDICTED: similar to chaperonin
containing TCP1, subunit 6A isoform 1; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
chaperonin containing TCP1, subunit 6A isoform 1 -
Strongylocentrotus purpuratus
Length = 485
Score = 58.4 bits (135), Expect = 9e-08
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 409 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTN 519
MAAI LNPKAE ARAA ALAVN SAA+G+QDV++TN
Sbjct: 1 MAAIKALNPKAEVARAAAALAVNTSAARGLQDVLRTN 37
>UniRef50_P40227 Cluster: T-complex protein 1 subunit zeta; n=71;
Eukaryota|Rep: T-complex protein 1 subunit zeta - Homo
sapiens (Human)
Length = 531
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +1
Query: 409 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTN 519
MAA+ LNPKAE ARA ALAVNISAA+G+QDV++TN
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTN 37
>UniRef50_UPI00005A1481 Cluster: PREDICTED: similar to T-complex
protein 1, zeta subunit (TCP-1-zeta) (CCT-zeta)
(CCT-zeta-1); n=3; Canis lupus familiaris|Rep:
PREDICTED: similar to T-complex protein 1, zeta subunit
(TCP-1-zeta) (CCT-zeta) (CCT-zeta-1) - Canis familiaris
Length = 514
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1
Query: 409 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTN 519
MAA+ LNPKAE ARA ALAVNISAA+G+Q V++TN
Sbjct: 36 MAAVKTLNPKAEVARAQAALAVNISAARGLQAVLRTN 72
>UniRef50_P46550 Cluster: T-complex protein 1 subunit zeta; n=22;
Eukaryota|Rep: T-complex protein 1 subunit zeta -
Caenorhabditis elegans
Length = 539
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1
Query: 409 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTN 519
M++I LNPKAE AR A AL +NIS A+G+QDVM++N
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSN 37
>UniRef50_Q2GQ09 Cluster: Putative uncharacterized protein; n=2;
Fungi/Metazoa group|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 528
Score = 50.0 bits (114), Expect = 3e-05
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +1
Query: 409 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTN 519
M+A LLNPKAE R +AL VNISA +G+QDV+K+N
Sbjct: 1 MSAAQLLNPKAESRRRGEALRVNISAGEGLQDVLKSN 37
>UniRef50_P39079 Cluster: T-complex protein 1 subunit zeta; n=50;
Eukaryota|Rep: T-complex protein 1 subunit zeta -
Saccharomyces cerevisiae (Baker's yeast)
Length = 546
Score = 41.9 bits (94), Expect = 0.009
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +1
Query: 415 AISLLNPKAEFARAAQALAVNISAAKGIQDVMKTN 519
++ LLNPKAE R AL VN+++A+G+Q V++TN
Sbjct: 2 SLQLLNPKAESLRRDAALKVNVTSAEGLQSVLETN 36
>UniRef50_A2DR42 Cluster: Chaperonin subunit zeta CCTzeta; n=2;
Trichomonas vaginalis|Rep: Chaperonin subunit zeta
CCTzeta - Trichomonas vaginalis G3
Length = 528
Score = 41.1 bits (92), Expect = 0.015
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +1
Query: 409 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTN 519
MAA+S LN +AE R QAL++N++A+ + D++KTN
Sbjct: 1 MAAVSQLNSQAELYRHNQALSMNLNASHSLADILKTN 37
>UniRef50_Q9GYV7 Cluster: Chaperonin-containing TCP-1, zeta subunit;
n=3; Entamoeba histolytica|Rep: Chaperonin-containing
TCP-1, zeta subunit - Entamoeba histolytica
Length = 540
Score = 35.9 bits (79), Expect = 0.56
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +1
Query: 409 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTN 519
M+A+ +LN +E +R Q+L +N+ AA+ ++ ++KTN
Sbjct: 1 MSALKILNQNSEASRRDQSLMMNMHAARSLEAILKTN 37
>UniRef50_Q7R133 Cluster: GLP_12_22978_24657; n=9; Eukaryota|Rep:
GLP_12_22978_24657 - Giardia lamblia ATCC 50803
Length = 559
Score = 35.5 bits (78), Expect = 0.74
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1
Query: 409 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTN 519
M+AI LN KAE R +AL +NI AA+ + +++TN
Sbjct: 1 MSAIHALNQKAEHLRRGEALDMNIDAAEKLTKLIRTN 37
>UniRef50_Q29236 Cluster: T-complex protein 1 subunit zeta; n=15;
Euteleostomi|Rep: T-complex protein 1 subunit zeta - Sus
scrofa (Pig)
Length = 104
Score = 35.5 bits (78), Expect = 0.74
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +1
Query: 463 ALAVNISAAKGIQDVMKTN 519
ALAVNISAA+G+QDV++TN
Sbjct: 4 ALAVNISAARGLQDVLRTN 22
>UniRef50_Q4YYM6 Cluster: Chaperone, putative; n=4; Plasmodium
(Vinckeia)|Rep: Chaperone, putative - Plasmodium berghei
Length = 542
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +1
Query: 415 AISLLNPKAEFARAAQALAVNISAAKGIQDVMKTN 519
++ +LN KA+ R+ L NI+A+KG+ +++K+N
Sbjct: 2 SVHMLNKKADSLRSTNVLLTNINASKGMYEIIKSN 36
>UniRef50_Q1DKZ2 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 593
Score = 33.1 bits (72), Expect = 4.0
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 391 ENVLNEMAAISLLN-PKAEFARAAQALAVNISAAKGIQDVMKT 516
EN+L +M A+ LLN K E + A+Q L+V +A+ I++V+KT
Sbjct: 105 ENLLGDMPALDLLNLEKNEGSHASQDLSVLSAASGDIRNVVKT 147
>UniRef50_UPI0000583E60 Cluster: PREDICTED: similar to Bindin; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Bindin - Strongylocentrotus purpuratus
Length = 1399
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 308 FFRVKIIRDCLLCCCFSIIYINIHCWLANYGCNVLICGRKLLFLKV 171
F +++I C+ C I+ + HCW+A Y C +I G LF+ +
Sbjct: 271 FVIMQVILSCI-CAVLGILAVAFHCWMA-YMCIPVIVGALELFVGI 314
>UniRef50_Q8CFU0 Cluster: RIKEN cDNA 1110012D08 gene; n=9;
Tetrapoda|Rep: RIKEN cDNA 1110012D08 gene - Mus musculus
(Mouse)
Length = 350
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 281 CLLCCCFSIIY--INIHCWLANYGCNVLICGRKLLFL 177
C LCCCF IIY C+ A + L+ G ++FL
Sbjct: 45 CALCCCFGIIYCCFGYRCFKAVMFLSGLLSGALVIFL 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,196,599
Number of Sequences: 1657284
Number of extensions: 8594584
Number of successful extensions: 18343
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18323
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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