Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304A07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    27   0.076
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   0.94 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   3.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   3.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   5.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 27.5 bits (58), Expect = 0.076
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -1

Query: 344 GIFQVILKTVGLFFRVKIIRDCLLCCCFSIIYINIHCWLANYGCNVLICGRKLLF 180
           G++   L+TVG   R+K  ++C +   F +I   +  + A+   N L  G+   F
Sbjct: 21  GLYPSYLQTVGKCQRLKTDKNCTIVIIFHLILFAVLLYFASLEKNPLFDGQLYSF 75


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 501 LNSFSCGYIYSKCLCSTSELG 439
           +N   CGYI+S  L S S LG
Sbjct: 45  INYCICGYIFSAILFSLSILG 65


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 113 QTLEAHRVTFSSLNKIIWIRPLETITSFHKSTHY 214
           QTLE   +   S+N    I  +ET   FH+ST +
Sbjct: 8   QTLENAGMPDESINISDVIEVIETDPDFHESTMF 41


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 337 KIPCAEFGTRVSS*LIETEN 396
           KIP AEF T  SS  +E+ N
Sbjct: 213 KIPPAEFPTTSSSSALESPN 232


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 337 KIPCAEFGTRVSS*LIETEN 396
           KIP AEF T  SS  +E+ N
Sbjct: 2   KIPPAEFPTTSSSSALESPN 21


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 337 KIPCAEFGTRVSS*LIETEN 396
           KIP AEF T  SS  +E+ N
Sbjct: 2   KIPPAEFPTTSSSSALESPN 21


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 415 AISLLNPKAEFARAAQALAVNISAAKGI 498
           A +++NP A    AAQ L +N+   + I
Sbjct: 190 APTMINPSAICESAAQLLFMNVQWVRSI 217


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 504 ILNSFSCGYIYSKCLCSTSE 445
           I+N+FSC  + +  LC   +
Sbjct: 72  IVNAFSCYTVLAPVLCKRQQ 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,660
Number of Sequences: 336
Number of extensions: 2477
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)