Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304A06f
         (476 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051884-1|AAK93308.1|  580|Drosophila melanogaster LD37277p pro...    65   4e-11
AJ277122-1|CAB86488.1|  580|Drosophila melanogaster Glaikit prot...    65   4e-11
AE014134-562|AAF51141.1|  580|Drosophila melanogaster CG8825-PA ...    65   4e-11
BT004895-1|AAO47873.1|  187|Drosophila melanogaster LD18389p pro...    41   8e-04
AE014297-2028|AAF55184.1|  187|Drosophila melanogaster CG6171-PA...    41   8e-04
AY069557-1|AAL39702.1|  449|Drosophila melanogaster LD28626p pro...    36   0.021
AE014297-358|AAF51951.2|  449|Drosophila melanogaster CG1218-PA ...    36   0.021
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA...    28   5.7  
BT004866-1|AAO45222.1| 1128|Drosophila melanogaster LD43531p pro...    28   7.5  
AF129433-1|AAD21090.1|  883|Drosophila melanogaster histone deac...    28   7.5  
AE014298-2131|AAN09662.1| 1138|Drosophila melanogaster CG6170-PC...    28   7.5  
AE014298-2130|AAN09661.1| 1135|Drosophila melanogaster CG6170-PB...    28   7.5  
AE014298-2129|AAF48443.2| 1128|Drosophila melanogaster CG6170-PA...    28   7.5  
AE014298-1794|AAF48188.3| 1173|Drosophila melanogaster CG17762-P...    27   9.9  
AE014298-1793|AAF48190.3| 1173|Drosophila melanogaster CG17762-P...    27   9.9  

>AY051884-1|AAK93308.1|  580|Drosophila melanogaster LD37277p
           protein.
          Length = 580

 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 34/80 (42%), Positives = 43/80 (53%)
 Frame = +2

Query: 98  KVCDYGEKCYRMNPVHFREFSHPHLESILDNHASGGXYPIPDKYNLQKKLITEQLDLIIE 277
           K C YGEKCYR NP+HF EFSH HL++I       G Y IP  Y+   ++I  QL L +E
Sbjct: 2   KECPYGEKCYRKNPIHFGEFSHAHLDAIYAKGNESGDYEIPANYS--SEMIHTQLKL-LE 58

Query: 278 KGFYAPRNNVQNNPKQIENK 337
           K F     N +       +K
Sbjct: 59  KLFPKQATNKEQEAHSSSSK 78


>AJ277122-1|CAB86488.1|  580|Drosophila melanogaster Glaikit protein
           protein.
          Length = 580

 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 34/80 (42%), Positives = 43/80 (53%)
 Frame = +2

Query: 98  KVCDYGEKCYRMNPVHFREFSHPHLESILDNHASGGXYPIPDKYNLQKKLITEQLDLIIE 277
           K C YGEKCYR NP+HF EFSH HL++I       G Y IP  Y+   ++I  QL L +E
Sbjct: 2   KECPYGEKCYRKNPIHFGEFSHAHLDAIYAKGNESGDYEIPANYS--SEMIHTQLKL-LE 58

Query: 278 KGFYAPRNNVQNNPKQIENK 337
           K F     N +       +K
Sbjct: 59  KLFPKQATNKEQEAHSSSSK 78


>AE014134-562|AAF51141.1|  580|Drosophila melanogaster CG8825-PA
           protein.
          Length = 580

 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 34/80 (42%), Positives = 43/80 (53%)
 Frame = +2

Query: 98  KVCDYGEKCYRMNPVHFREFSHPHLESILDNHASGGXYPIPDKYNLQKKLITEQLDLIIE 277
           K C YGEKCYR NP+HF EFSH HL++I       G Y IP  Y+   ++I  QL L +E
Sbjct: 2   KECPYGEKCYRKNPIHFGEFSHAHLDAIYAKGNESGDYEIPANYS--SEMIHTQLKL-LE 58

Query: 278 KGFYAPRNNVQNNPKQIENK 337
           K F     N +       +K
Sbjct: 59  KLFPKQATNKEQEAHSSSSK 78


>BT004895-1|AAO47873.1|  187|Drosophila melanogaster LD18389p
           protein.
          Length = 187

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 104 CDYGEKCYRMNPVHFREFSHP 166
           C +G  CYR NPVHF+++SHP
Sbjct: 163 CPFGNACYRRNPVHFQDYSHP 183



 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 104 CDYGEKCYRMNPVHFREFSHP 166
           C +G +CYR NP H    +HP
Sbjct: 123 CRFGIRCYRRNPAHRSAEAHP 143


>AE014297-2028|AAF55184.1|  187|Drosophila melanogaster CG6171-PA
           protein.
          Length = 187

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 104 CDYGEKCYRMNPVHFREFSHP 166
           C +G  CYR NPVHF+++SHP
Sbjct: 163 CPFGNACYRRNPVHFQDYSHP 183



 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 104 CDYGEKCYRMNPVHFREFSHP 166
           C +G +CYR NP H    +HP
Sbjct: 123 CRFGIRCYRRNPAHRSAEAHP 143


>AY069557-1|AAL39702.1|  449|Drosophila melanogaster LD28626p
           protein.
          Length = 449

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 95  KKVCDYGEKCYRMNPVHFREFSHP 166
           K+ C Y +KCY+ NP H  +++HP
Sbjct: 3   KEDCKYWDKCYQQNPAHLSKYNHP 26


>AE014297-358|AAF51951.2|  449|Drosophila melanogaster CG1218-PA
           protein.
          Length = 449

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 95  KKVCDYGEKCYRMNPVHFREFSHP 166
           K+ C Y +KCY+ NP H  +++HP
Sbjct: 3   KEDCKYWDKCYQQNPAHLSKYNHP 26


>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
            protein.
          Length = 3111

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 336  NKKQTGDNREGKNVGSKIEPEASSASHQKVPGQ 434
            NKK+  D  E K+     EPE S  +++K  G+
Sbjct: 1103 NKKEPPDEEESKSTKEPEEPEESEKANEKTSGR 1135


>BT004866-1|AAO45222.1| 1128|Drosophila melanogaster LD43531p
           protein.
          Length = 1128

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 122 CYRMNPVHFREFSHPHLESILDNHASGGXYPIPDKYNLQKKLITE 256
           C    P H  E  HPH   I +N A    Y I D + L++ LI +
Sbjct: 656 CNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD-FGLERVLIVD 699


>AF129433-1|AAD21090.1|  883|Drosophila melanogaster histone
           deacetylase HDA2 protein.
          Length = 883

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 122 CYRMNPVHFREFSHPHLESILDNHASGGXYPIPDKYNLQKKLITE 256
           C    P H  E  HPH   I +N A    Y I D + L++ LI +
Sbjct: 581 CNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD-FGLERVLIVD 624


>AE014298-2131|AAN09662.1| 1138|Drosophila melanogaster CG6170-PC,
           isoform C protein.
          Length = 1138

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 122 CYRMNPVHFREFSHPHLESILDNHASGGXYPIPDKYNLQKKLITE 256
           C    P H  E  HPH   I +N A    Y I D + L++ LI +
Sbjct: 666 CNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD-FGLERVLIVD 709


>AE014298-2130|AAN09661.1| 1135|Drosophila melanogaster CG6170-PB,
           isoform B protein.
          Length = 1135

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 122 CYRMNPVHFREFSHPHLESILDNHASGGXYPIPDKYNLQKKLITE 256
           C    P H  E  HPH   I +N A    Y I D + L++ LI +
Sbjct: 663 CNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD-FGLERVLIVD 706


>AE014298-2129|AAF48443.2| 1128|Drosophila melanogaster CG6170-PA,
           isoform A protein.
          Length = 1128

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 122 CYRMNPVHFREFSHPHLESILDNHASGGXYPIPDKYNLQKKLITE 256
           C    P H  E  HPH   I +N A    Y I D + L++ LI +
Sbjct: 656 CNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRD-FGLERVLIVD 699


>AE014298-1794|AAF48188.3| 1173|Drosophila melanogaster CG17762-PB,
           isoform B protein.
          Length = 1173

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 281 GFYAPRNNVQNNPKQIENKQETDRGQPRREKCWVQN*TGGKFRKSSKST 427
           G + P +    +PK+IENK+E  R  P  ++    + T  + R SS S+
Sbjct: 649 GAHDPYSRTPKSPKRIENKEEQSR-SPSSDQVNKLDGTFSRSRSSSMSS 696


>AE014298-1793|AAF48190.3| 1173|Drosophila melanogaster CG17762-PA,
           isoform A protein.
          Length = 1173

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 281 GFYAPRNNVQNNPKQIENKQETDRGQPRREKCWVQN*TGGKFRKSSKST 427
           G + P +    +PK+IENK+E  R  P  ++    + T  + R SS S+
Sbjct: 649 GAHDPYSRTPKSPKRIENKEEQSR-SPSSDQVNKLDGTFSRSRSSSMSS 696


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,654,212
Number of Sequences: 53049
Number of extensions: 471519
Number of successful extensions: 1267
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)