Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304A06f
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 35 0.026
U46673-7|AAC48154.1| 811|Caenorhabditis elegans Beta-catenin/ar... 29 1.7
AF063646-1|AAC17424.1| 811|Caenorhabditis elegans beta-catenin/... 29 1.7
AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical... 29 1.7
Z74030-8|CAD54129.1| 181|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z92849-7|CAB07432.1| 270|Caenorhabditis elegans Hypothetical pr... 28 3.0
AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium bind... 28 3.0
L14433-7|AAA27972.1| 469|Caenorhabditis elegans Hypothetical pr... 27 5.3
AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical ... 27 5.3
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 27 7.0
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 27 7.0
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 27 7.0
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 27 7.0
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 27 7.0
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 27 7.0
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 27 7.0
AF106575-17|AAD56300.2| 333|Caenorhabditis elegans Serpentine r... 27 7.0
Z46933-6|CAA87038.3| 321|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z46829-2|CAA86863.3| 321|Caenorhabditis elegans Hypothetical pr... 27 9.2
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 27 9.2
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 27 9.2
U28742-2|AAA68332.2| 925|Caenorhabditis elegans Adaptin, alpha ... 27 9.2
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 35.1 bits (77), Expect = 0.026
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 98 KVCDYGEKCYRMNPVHFREFSHP 166
+ C YGEKCYR N H F HP
Sbjct: 469 EACRYGEKCYRKNKDHLDSFWHP 491
>U46673-7|AAC48154.1| 811|Caenorhabditis elegans
Beta-catenin/armadillo relatedprotein 1 protein.
Length = 811
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 110 YGEKCYRMNPVHFREFSHPHLESILDNHASGGXY--PIPDKYN 232
Y Y P + E+S E+ LD HA+ Y P P +YN
Sbjct: 736 YNSPMYHSPPAMYPEYSIGPPETYLDPHATASCYPRPTPPQYN 778
>AF063646-1|AAC17424.1| 811|Caenorhabditis elegans
beta-catenin/armadillo homologBAR-1 protein.
Length = 811
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 110 YGEKCYRMNPVHFREFSHPHLESILDNHASGGXY--PIPDKYN 232
Y Y P + E+S E+ LD HA+ Y P P +YN
Sbjct: 736 YNSPMYHSPPAMYPEYSIGPPETYLDPHATASCYPRPTPPQYN 778
>AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical
protein Y54F10AM.11 protein.
Length = 286
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 152 EFSHPHLE-SILDNHASGGXYPIPDKYNLQKKLITEQLDLIIEKGFYAPRNNVQNNPKQI 328
E H +E ++ D++ASG + D + +L+ +L I+++ F PR + + + +
Sbjct: 197 EDDHSQMELTVPDDNASGSSGTLGDSEDTGAELVEPELSRILQRTFVVPRRSRKLSVPEP 256
Query: 329 ENKQE 343
E +E
Sbjct: 257 EEYEE 261
>Z74030-8|CAD54129.1| 181|Caenorhabditis elegans Hypothetical
protein D1054.9c protein.
Length = 181
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 279 RDSMLLGTMYKTTQNKLRTNKKQTGDNREGKNVGSKIEPEASSASHQKVPGQ 434
+D L+G K T +LRT Q G E +G E + A+ QK Q
Sbjct: 119 QDVRLMGNQLKNTWQQLRTGTTQQGPMNE--QIGRLFEKAVADAADQKTQQQ 168
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 137 PVHFREFSHPHLESILDNHASGGXYPIPDKYNL 235
P+H R+ S P+L + ++N S P P +N+
Sbjct: 97 PIHTRQVSAPNLHTSVNNGQSSATVPHPSHHNV 129
>Z92849-7|CAB07432.1| 270|Caenorhabditis elegans Hypothetical
protein H12D21.9 protein.
Length = 270
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 392 FNFGPNIFPFSVVPCLFLVCSQFVLGCFVHC 300
F GP FP+S++ C+ ++C+ V+ F+ C
Sbjct: 125 FYDGP--FPWSLILCILMLCNCLVVFIFIRC 153
>AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform d protein.
Length = 679
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 194 ASGGXYPIPDKYNLQKKLITEQLDLIIEKGFYAPRNNVQNNPKQIENKQETD 349
A+ P P K ++ +T +L++E+ Y N + NPK+ ++ + D
Sbjct: 612 ATSSATPKPSKRTTTRRPMTASKELVVEEIIYEDENGNRMNPKKRKSGKADD 663
>L14433-7|AAA27972.1| 469|Caenorhabditis elegans Hypothetical
protein C50C3.1 protein.
Length = 469
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 53 SDEELCKKMRQKE*KKVCDYGEKC 124
SDE CK+MR K+ ++ +GE C
Sbjct: 74 SDEGRCKQMRMKDNQEFIIFGEHC 97
>AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical
protein Y40D12A.2 protein.
Length = 512
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 230 NLQKKLITEQLDLIIEKGFYAPRNNVQNNP 319
NL KK+I E ++ K FY P N++Q P
Sbjct: 298 NLYKKIIGES-PVLKNKYFYPPSNDIQGQP 326
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 296 RNNVQNNPKQIENKQETDRGQPRREK--CWVQN*TGGKFRKSSKST 427
R++ +N + EN+ ++ R QPRR++ V+ G +FR+ +T
Sbjct: 239 RSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVRFRRERSAT 284
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 296 RNNVQNNPKQIENKQETDRGQPRREK--CWVQN*TGGKFRKSSKST 427
R++ +N + EN+ ++ R QPRR++ V+ G +FR+ +T
Sbjct: 239 RSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVRFRRERSAT 284
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 296 RNNVQNNPKQIENKQETDRGQPRREK--CWVQN*TGGKFRKSSKST 427
R++ +N + EN+ ++ R QPRR++ V+ G +FR+ +T
Sbjct: 239 RSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVRFRRERSAT 284
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 309 KTTQNKLRTNKKQTGDNREGKNVGSKIEPEASSASHQKVP 428
+TTQ+ LR K+ + +NV ++ E + S S + +P
Sbjct: 904 QTTQDALRDELKECKEELANRNVNTRYEDKRSLDSREGIP 943
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 309 KTTQNKLRTNKKQTGDNREGKNVGSKIEPEASSASHQKVP 428
+TTQ+ LR K+ + +NV ++ E + S S + +P
Sbjct: 904 QTTQDALRDELKECKEELANRNVNTRYEDKRSLDSREGIP 943
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 296 RNNVQNNPKQIENKQETDRGQPRREK--CWVQN*TGGKFRKSSKST 427
R++ +N + EN+ ++ R QPRR++ V+ G +FR+ +T
Sbjct: 239 RSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVRFRRERSAT 284
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 251 TEQLDLIIEKGFYAPRNNVQNNPKQIEN 334
T+Q D+I+ Y P+ NV PK +EN
Sbjct: 322 TKQKDVIVRD--YDPKRNVTQKPKAVEN 347
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 251 TEQLDLIIEKGFYAPRNNVQNNPKQIEN 334
T+Q D+I+ Y P+ NV PK +EN
Sbjct: 322 TKQKDVIVRD--YDPKRNVTQKPKAVEN 347
>AF106575-17|AAD56300.2| 333|Caenorhabditis elegans Serpentine
receptor, class h protein5 protein.
Length = 333
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -1
Query: 443 FSGLSGYFLMTCGTCLRFNFGPNIFPFSVVPCLFLVCSQFVLGCF 309
F SGY M C C NF NIF +L+C + CF
Sbjct: 172 FGTFSGY--MWCDNCFFMNFDSNIFKI-----FYLICGIGTVMCF 209
>Z46933-6|CAA87038.3| 321|Caenorhabditis elegans Hypothetical
protein T14B1.2 protein.
Length = 321
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/42 (21%), Positives = 22/42 (52%)
Frame = -1
Query: 425 YFLMTCGTCLRFNFGPNIFPFSVVPCLFLVCSQFVLGCFVHC 300
+ +T G+CL + P ++ S + + ++ + F L ++C
Sbjct: 153 FLKITRGSCLGVSLNPYVYLLSPIFYVVMILTSFSLSALIYC 194
>Z46829-2|CAA86863.3| 321|Caenorhabditis elegans Hypothetical
protein T14B1.2 protein.
Length = 321
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/42 (21%), Positives = 22/42 (52%)
Frame = -1
Query: 425 YFLMTCGTCLRFNFGPNIFPFSVVPCLFLVCSQFVLGCFVHC 300
+ +T G+CL + P ++ S + + ++ + F L ++C
Sbjct: 153 FLKITRGSCLGVSLNPYVYLLSPIFYVVMILTSFSLSALIYC 194
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 318 QNKLRTNKKQTGDNREGKNVGSK 386
+NK++ +KQ +NRE K G K
Sbjct: 399 KNKMKDRRKQKWENRENKTEGEK 421
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 318 QNKLRTNKKQTGDNREGKNVGSK 386
+NK++ +KQ +NRE K G K
Sbjct: 417 KNKMKDRRKQKWENRENKTEGEK 439
>U28742-2|AAA68332.2| 925|Caenorhabditis elegans Adaptin, alpha
chain (clathrinassociated complex) protein 2 protein.
Length = 925
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = -3
Query: 450 FCIFRFVRVLFDDLRNLPPVQFWTQHFSLLGCPLSVSCLFSICFGLFCTLF 298
+ + F + D R+ +QF H C ++ CL + FC LF
Sbjct: 501 YILGEFGNFIAGDERSTAKIQFELLHSKFHLCSITTRCLLLTTYIKFCNLF 551
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,428,463
Number of Sequences: 27780
Number of extensions: 252981
Number of successful extensions: 823
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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