Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304A03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    25   0.41 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    25   0.41 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           25   0.41 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.54 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.54 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.2  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   3.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   5.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   5.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.7  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 126 NGADSRYENKITPRDHTKYQSICVPKSFQF 215
           +G  S   NK T + +T+YQ++ + K F F
Sbjct: 175 HGDSSATGNKRTRQTYTRYQTLELEKEFHF 204


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 126 NGADSRYENKITPRDHTKYQSICVPKSFQF 215
           +G  S   NK T + +T+YQ++ + K F F
Sbjct: 175 HGDSSATGNKRTRQTYTRYQTLELEKEFHF 204


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 126 NGADSRYENKITPRDHTKYQSICVPKSFQF 215
           +G  S   NK T + +T+YQ++ + K F F
Sbjct: 175 HGDSSATGNKRTRQTYTRYQTLELEKEFHF 204


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +3

Query: 108 IQTTIYNGADSRYENKITPRDHTKYQSICVPKSFQF 215
           + + +Y    S++E K   + +T+YQ++ + K F F
Sbjct: 228 LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHF 263


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +3

Query: 108 IQTTIYNGADSRYENKITPRDHTKYQSICVPKSFQF 215
           + + +Y    S++E K   + +T+YQ++ + K F F
Sbjct: 230 LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHF 265


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 378 RIEITLVITKLKKKGWLFFSNREFRYHKQ 464
           RIEI   +   +K+  ++F NR  +Y K+
Sbjct: 147 RIEIATCLRLSEKQVKIWFQNRRVKYKKE 175


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -2

Query: 169 SLGVILFSYLESAPLYIVVCISTEQGLISAAVD*KLLIELPNILYDF 29
           +L  ++F +  SAP+ I +      G ++ A   KLLI L  I Y+F
Sbjct: 84  TLNDVVFIFC-SAPIIITILDIEILGYVNKAKFGKLLINLYTINYNF 129


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 126 NGADSRYENKITPRDHTKYQSICVPK 203
           +GA +  E ++TP  H      CVPK
Sbjct: 33  SGASTTDECQVTPVIHVLQYPGCVPK 58


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +3

Query: 96  CSVEIQTTIYNGADSRYENKITPRDHTKYQSICVP 200
           C   +   ++N    R   K++PR +T   + C+P
Sbjct: 325 CMNPVVYGVFNIRARRTGRKVSPRVNTIKHTSCIP 359


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +3

Query: 96  CSVEIQTTIYNGADSRYENKITPRDHTKYQSICVP 200
           C   +   ++N    R   K++PR +T   + C+P
Sbjct: 325 CMNPVVYGVFNIRARRTGRKVSPRVNTIKHTSCIP 359


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 154 LFSYLESAPLYIVVCISTEQGL 89
           LF  L +   Y++V I   QGL
Sbjct: 353 LFGILATTTTYLIVTIQFNQGL 374


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +1

Query: 130 VQIRDTKTK*LQEITRNINQSVSRNRFNS*QYHISVFYLFIYLFNQILYVAIKLNIFLD 306
           VQ+  T+   L  ++ NI    + + F   Q  I +     YL+  ++ ++  L +FL+
Sbjct: 180 VQLILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLFLE 238


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +1

Query: 130 VQIRDTKTK*LQEITRNINQSVSRNRFNS*QYHISVFYLFIYLFNQILYVAIKLNIFLD 306
           VQ+  T+   L  ++ NI    + + F   Q  I +     YL+  ++ ++  L +FL+
Sbjct: 106 VQLILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLFLE 164


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 128 RCRFEIRKQNNSKRSHEISIN 190
           RC F +R     K +HEI ++
Sbjct: 281 RCIFSLRPGLTHKYTHEIKLH 301


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 442 LFEKKSHPFFFNFVITS 392
           L + KS  F+F+F ITS
Sbjct: 48  LKQHKSDYFYFSFYITS 64


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 442 LFEKKSHPFFFNFVITS 392
           L + KS  F+F+F ITS
Sbjct: 48  LKQHKSDYFYFSFYITS 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,586
Number of Sequences: 336
Number of extensions: 2328
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)