Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304A03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022162-1|AAY51556.1|  395|Drosophila melanogaster IP01380p pro...    28   8.8  
AE014298-1329|AAF46491.3| 1367|Drosophila melanogaster CG32705-P...    28   8.8  
AE014296-2073|AAF49976.1| 1219|Drosophila melanogaster CG6938-PA...    28   8.8  

>BT022162-1|AAY51556.1|  395|Drosophila melanogaster IP01380p
           protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/38 (26%), Positives = 25/38 (65%)
 Frame = -2

Query: 484 CLDTLNYCL*YLNSLFEKKSHPFFFNFVITSVISILKI 371
           C++T ++   ++N+   ++++ FFF F+++  I +L I
Sbjct: 16  CIETFDHHCPWVNNCIGRRNYRFFFFFLVSLSIHMLSI 53


>AE014298-1329|AAF46491.3| 1367|Drosophila melanogaster CG32705-PA
           protein.
          Length = 1367

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/38 (26%), Positives = 25/38 (65%)
 Frame = -2

Query: 484 CLDTLNYCL*YLNSLFEKKSHPFFFNFVITSVISILKI 371
           C++T ++   ++N+   ++++ FFF F+++  I +L I
Sbjct: 134 CIETFDHHCPWVNNCIGRRNYRFFFFFLVSLSIHMLSI 171


>AE014296-2073|AAF49976.1| 1219|Drosophila melanogaster CG6938-PA
           protein.
          Length = 1219

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +3

Query: 75  TAAEIKPCSVEIQTTIYNGADSRYENKITPRDHTKYQSICVPKSFQF 215
           TAA I    + I T IY+    +  N   PR HT+Y+     K F F
Sbjct: 783 TAALINLVVIMILTRIYHRMAIKLTNLENPRTHTEYEDSYTFKIFFF 829


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,841,869
Number of Sequences: 53049
Number of extensions: 330687
Number of successful extensions: 550
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)