Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304A02f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7SXL9 Cluster: Fam46c protein; n=2; Danio rerio|Rep: F... 39 0.060
UniRef50_Q7ZUP1 Cluster: Protein FAM46C; n=27; Eumetazoa|Rep: Pr... 39 0.060
UniRef50_A3BI32 Cluster: Putative uncharacterized protein; n=1; ... 36 0.56
UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;... 35 1.3
UniRef50_Q5VWP2 Cluster: Protein FAM46C; n=13; Theria|Rep: Prote... 33 3.0
UniRef50_Q4SXD5 Cluster: Chromosome undetermined SCAF12463, whol... 33 4.0
UniRef50_UPI0000DD794A Cluster: PREDICTED: hypothetical protein;... 33 5.2
UniRef50_A3UEA0 Cluster: DNA repair protein RecN; n=7; Alphaprot... 33 5.2
UniRef50_UPI0000F3144F Cluster: UPI0000F3144F related cluster; n... 32 6.9
UniRef50_Q5TF85 Cluster: Family with sequence similarity 46, mem... 32 6.9
UniRef50_Q4P3N9 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_Q96IP4 Cluster: Protein FAM46A; n=48; Euteleostomi|Rep:... 32 6.9
UniRef50_Q4S038 Cluster: Chromosome 21 SCAF14785, whole genome s... 32 9.2
UniRef50_Q7WPM2 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_A5UZX0 Cluster: Galactokinase; n=4; Chloroflexaceae|Rep... 32 9.2
>UniRef50_Q7SXL9 Cluster: Fam46c protein; n=2; Danio rerio|Rep:
Fam46c protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 107
Score = 39.1 bits (87), Expect = 0.060
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 277 TSSEEGCGAGERHAVLSYEQVRRLNDVMDEVVAIHGSRQLP 399
++S E +VL++EQV RLNDV+ E V +HG P
Sbjct: 3 SASTSSSNESESQSVLTWEQVSRLNDVLTEAVPVHGRGNFP 43
Score = 32.7 bits (71), Expect = 5.2
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 374 PSTGRGNFPTLHVRLRELV 430
P GRGNFPTL VRL+++V
Sbjct: 35 PVHGRGNFPTLEVRLKDIV 53
>UniRef50_Q7ZUP1 Cluster: Protein FAM46C; n=27; Eumetazoa|Rep:
Protein FAM46C - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 388
Score = 39.1 bits (87), Expect = 0.060
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 277 TSSEEGCGAGERHAVLSYEQVRRLNDVMDEVVAIHGSRQLP 399
++S E +VL++EQV RLNDV+ E V +HG P
Sbjct: 3 SASTSSSNESESQSVLTWEQVSRLNDVLTEAVPVHGRGNFP 43
Score = 32.7 bits (71), Expect = 5.2
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 374 PSTGRGNFPTLHVRLRELV 430
P GRGNFPTL VRL+++V
Sbjct: 35 PVHGRGNFPTLEVRLKDIV 53
>UniRef50_A3BI32 Cluster: Putative uncharacterized protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 1966
Score = 35.9 bits (79), Expect = 0.56
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +1
Query: 178 KSVNMGVIKLSPDTASLISACDLLDDMKSESSYTSSEEGCGAGERHAVLSYEQVRRLNDV 357
K VN K SP T S +AC+++ D K +S T S+EG ER A+ + ++ ++ V
Sbjct: 1310 KEVNSSSEKESPSTPSHKAACNVILDYKDNTS-TDSDEGVTPHEREAMRAEAELEKVL-V 1367
Query: 358 MDEVVAIHGSRQLP 399
+ + + G + LP
Sbjct: 1368 KEVNMNLRGGKVLP 1381
>UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 468
Score = 34.7 bits (76), Expect = 1.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 301 AGERHAVLSYEQVRRLNDVMDEVVAIHGSRQLP 399
+G R VLSY QV RL++V+ VA+HG P
Sbjct: 6 SGARFQVLSYPQVVRLDEVLTTPVAVHGRGNFP 38
>UniRef50_Q5VWP2 Cluster: Protein FAM46C; n=13; Theria|Rep: Protein
FAM46C - Homo sapiens (Human)
Length = 391
Score = 33.5 bits (73), Expect = 3.0
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 316 AVLSYEQVRRLNDVMDEVVAIHGSRQLP 399
+VL+++QV RL++V+ EVV IHG P
Sbjct: 15 SVLNWDQVSRLHEVLTEVVPIHGRGNFP 42
>UniRef50_Q4SXD5 Cluster: Chromosome undetermined SCAF12463, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF12463,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 192
Score = 33.1 bits (72), Expect = 4.0
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 218 PRPSYLPATCSMT*RANRA-IHRQKKGAVRESVTPCSATSKCGGSMTSWTRWWPSTG 385
P PS T + T RA+ A R GA T T+ GGS TSW W PS G
Sbjct: 125 PCPSSRRRT-ARTARADAAWASRWWTGAAARPATCSPTTASTGGSATSWRGWEPSAG 180
>UniRef50_UPI0000DD794A Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 1202
Score = 32.7 bits (71), Expect = 5.2
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +2
Query: 140 RAFAP-VRLHDQIIRASTWASSN*VRTPRPSYLPATCSMT*RANRAIHRQKKG--AVRES 310
RA P VRL + W R+P + P C + RA Q +G A+
Sbjct: 197 RAAGPAVRLRPALTALGGWGKRGPRRSPCAARDPKRC-LRDRAEDRRASQDRGPWALTPR 255
Query: 311 VTPCSATSKCGGSMTSWTRWWPSTGRG 391
TPCS ++CGGS S R P GRG
Sbjct: 256 STPCSERARCGGS--SGAR-EPGEGRG 279
>UniRef50_A3UEA0 Cluster: DNA repair protein RecN; n=7;
Alphaproteobacteria|Rep: DNA repair protein RecN -
Oceanicaulis alexandrii HTCC2633
Length = 566
Score = 32.7 bits (71), Expect = 5.2
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 241 DLLDDMKSESSYTSSEEGCGAGERHAVLSYEQVRRLNDVMDEVVAIHG-SRQLPYAARAL 417
D ++++++ + T E+G A + + + LND MD V G S +L A R L
Sbjct: 194 DSVEELEALNPQTGEEDGLAAERKFLQQAESALSELNDAMDAVAGGDGLSNRLNTALRGL 253
Query: 418 TRACSXGCEPAWSWXGRLGGAGVSV 492
R E A G G A SV
Sbjct: 254 ERV-RAALEGAEGGEGEAGAAHASV 277
>UniRef50_UPI0000F3144F Cluster: UPI0000F3144F related cluster; n=1;
Bos taurus|Rep: UPI0000F3144F UniRef100 entry - Bos
Taurus
Length = 307
Score = 32.3 bits (70), Expect = 6.9
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = +1
Query: 379 HGSRQLPYAARALTRACSXGCEPAWSWXGRLGGAGVSVRGCPP 507
HGS P+A A R C PA S GR GG G + +G PP
Sbjct: 211 HGSHTAPHAQEAAPRPAPR-CGPAAS--GRPGGGGKARQGAPP 250
>UniRef50_Q5TF85 Cluster: Family with sequence similarity 46, member
A; n=9; Euteleostomi|Rep: Family with sequence
similarity 46, member A - Homo sapiens (Human)
Length = 523
Score = 32.3 bits (70), Expect = 6.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 295 CGAGERHA-VLSYEQVRRLNDVMDEVVAIHGSRQLP 399
C + H VL++EQV+RL+ ++ E + IHG P
Sbjct: 137 CESPTAHCNVLNWEQVQRLDGILSETIPIHGRGNFP 172
>UniRef50_Q4P3N9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 693
Score = 32.3 bits (70), Expect = 6.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 108 ATSRAKPSRSSARLHLFGFTTRS*ERQHGRHQIESGHRVPHI 233
AT R S S+ L++ G + +S QH +HQ H+ PH+
Sbjct: 31 ATMRPTSSGSNLHLNISGLSVKSEGEQHQQHQQYQQHQQPHL 72
>UniRef50_Q96IP4 Cluster: Protein FAM46A; n=48; Euteleostomi|Rep:
Protein FAM46A - Homo sapiens (Human)
Length = 447
Score = 32.3 bits (70), Expect = 6.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 295 CGAGERHA-VLSYEQVRRLNDVMDEVVAIHGSRQLP 399
C + H VL++EQV+RL+ ++ E + IHG P
Sbjct: 61 CESPTAHCNVLNWEQVQRLDGILSETIPIHGRGNFP 96
>UniRef50_Q4S038 Cluster: Chromosome 21 SCAF14785, whole genome
shotgun sequence; n=2; Coelomata|Rep: Chromosome 21
SCAF14785, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 48
Score = 31.9 bits (69), Expect = 9.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 310 RHAVLSYEQVRRLNDVMDEVVAIHGSRQLP 399
R +VL ++QVRRL+ ++ E V IHG P
Sbjct: 6 RLSVLCWDQVRRLDSILAESVPIHGRGNFP 35
>UniRef50_Q7WPM2 Cluster: Putative uncharacterized protein; n=1;
Bordetella bronchiseptica|Rep: Putative uncharacterized
protein - Bordetella bronchiseptica (Alcaligenes
bronchisepticus)
Length = 467
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 240 AGRYEGRGVRTQFDDAHVDALMIWS*SRTGANARRTERVLRA 115
AG GR T+ + H+DAL WS A ER+ RA
Sbjct: 79 AGLQPGRAALTEREQRHLDALACWSRDSLQAATEHWERIARA 120
>UniRef50_A5UZX0 Cluster: Galactokinase; n=4; Chloroflexaceae|Rep:
Galactokinase - Roseiflexus sp. RS-1
Length = 391
Score = 31.9 bits (69), Expect = 9.2
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +1
Query: 172 DHKSVNMGVIKLSPDTASLISACDLLDDMKSESSYTSSEEGCGAGERHAVLSYEQVRRLN 351
D + + + L P A ++ + + + S+Y + C A R Y +R L
Sbjct: 187 DCRDLTYRAVPLPPSVAVVVCDSHIARTLAA-SAYNQRRQECDAAVRALQQWYPGIRALR 245
Query: 352 DVMDEVVAIHGSRQLPYAARALTR 423
DV ++ +A H +LP RA R
Sbjct: 246 DVSEDQLAAH-QHELPEPLRARAR 268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,554,710
Number of Sequences: 1657284
Number of extensions: 8037203
Number of successful extensions: 28738
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 27782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28732
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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