Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304A02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   2.7  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   2.7  
AF164151-1|AAD47075.1|  148|Anopheles gambiae translation initia...    23   8.2  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 506  GGHPRTETPAPPSRP 462
            GG PR ETPA P  P
Sbjct: 1106 GGSPRPETPAFPVTP 1120


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -3

Query: 348 EPPHLLVAEHGVTLSRTAPFF*RCIAR--FALHVIEQVAG 235
           +PP  LV +  V +S  AP     IAR  ++L  ++ V G
Sbjct: 275 QPPEFLVTQPVVRISEDAPIGTEVIARMIYSLSTVKAVDG 314


>AF164151-1|AAD47075.1|  148|Anopheles gambiae translation
           initiation factor 4C (1A) protein.
          Length = 148

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 241 DLLDDMKSESSYTSSEEG 294
           D+ DD++    Y+SSEEG
Sbjct: 125 DMDDDIEFGDDYSSSEEG 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,825
Number of Sequences: 2352
Number of extensions: 8170
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)