Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304A02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015309-1|AAT94537.1|  880|Drosophila melanogaster AT07233p pro...    45   5e-05
AY089511-1|AAL90249.1|  560|Drosophila melanogaster GH21034p pro...    45   5e-05
AE013599-494|AAN16139.1|  529|Drosophila melanogaster CG30497-PC...    45   5e-05
AE013599-493|AAF59198.3|  560|Drosophila melanogaster CG30497-PB...    45   5e-05
AE013599-492|AAF59197.3|  877|Drosophila melanogaster CG30497-PA...    45   5e-05
AY113648-1|AAM29653.1| 1308|Drosophila melanogaster SD12145p pro...    29   2.9  
AL121804-6|CAB65858.1| 2160|Drosophila melanogaster EG:BACR7C10....    29   2.9  
AE014298-425|AAF45800.2| 2178|Drosophila melanogaster CG10260-PB...    29   2.9  
Y15594-1|CAA75689.1|  776|Drosophila melanogaster nicotinic acet...    29   5.1  

>BT015309-1|AAT94537.1|  880|Drosophila melanogaster AT07233p
           protein.
          Length = 880

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +1

Query: 262 SESSYTSSEE-GCGAGERHAVLSYEQVRRLNDVMDEVVAIHGSRQLP 399
           S S + S E    G  +R AVLS+EQV +L+DVMDE VAIHG    P
Sbjct: 382 STSDHGSLESVDTGGTQRLAVLSFEQVSKLHDVMDEKVAIHGRGNFP 428



 Score = 34.3 bits (75), Expect = 0.10
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +2

Query: 383 GRGNFPTLHVRLRELVXXXXXXXXXXXXXXXXXXXXXXDVRLNGGA 520
           GRGNFPTL V+L++LV                      D+RLNGGA
Sbjct: 423 GRGNFPTLEVKLKDLV-NLVRRKLEAEVNAGGAGVLVKDIRLNGGA 467


>AY089511-1|AAL90249.1|  560|Drosophila melanogaster GH21034p
           protein.
          Length = 560

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +1

Query: 262 SESSYTSSEE-GCGAGERHAVLSYEQVRRLNDVMDEVVAIHGSRQLP 399
           S S + S E    G  +R AVLS+EQV +L+DVMDE VAIHG    P
Sbjct: 62  STSDHGSLESVDTGGTQRLAVLSFEQVSKLHDVMDEKVAIHGRGNFP 108



 Score = 34.3 bits (75), Expect = 0.10
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +2

Query: 383 GRGNFPTLHVRLRELVXXXXXXXXXXXXXXXXXXXXXXDVRLNGGA 520
           GRGNFPTL V+L++LV                      D+RLNGGA
Sbjct: 103 GRGNFPTLEVKLKDLV-NLVRRKLEAEVNAGGAGVLVKDIRLNGGA 147


>AE013599-494|AAN16139.1|  529|Drosophila melanogaster CG30497-PC,
           isoform C protein.
          Length = 529

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +1

Query: 262 SESSYTSSEE-GCGAGERHAVLSYEQVRRLNDVMDEVVAIHGSRQLP 399
           S S + S E    G  +R AVLS+EQV +L+DVMDE VAIHG    P
Sbjct: 31  STSDHGSLESVDTGGTQRLAVLSFEQVSKLHDVMDEKVAIHGRGNFP 77



 Score = 34.3 bits (75), Expect = 0.10
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +2

Query: 383 GRGNFPTLHVRLRELVXXXXXXXXXXXXXXXXXXXXXXDVRLNGGA 520
           GRGNFPTL V+L++LV                      D+RLNGGA
Sbjct: 72  GRGNFPTLEVKLKDLV-NLVRRKLEAEVNAGGAGVLVKDIRLNGGA 116


>AE013599-493|AAF59198.3|  560|Drosophila melanogaster CG30497-PB,
           isoform B protein.
          Length = 560

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +1

Query: 262 SESSYTSSEE-GCGAGERHAVLSYEQVRRLNDVMDEVVAIHGSRQLP 399
           S S + S E    G  +R AVLS+EQV +L+DVMDE VAIHG    P
Sbjct: 62  STSDHGSLESVDTGGTQRLAVLSFEQVSKLHDVMDEKVAIHGRGNFP 108



 Score = 34.3 bits (75), Expect = 0.10
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +2

Query: 383 GRGNFPTLHVRLRELVXXXXXXXXXXXXXXXXXXXXXXDVRLNGGA 520
           GRGNFPTL V+L++LV                      D+RLNGGA
Sbjct: 103 GRGNFPTLEVKLKDLV-NLVRRKLEAEVNAGGAGVLVKDIRLNGGA 147


>AE013599-492|AAF59197.3|  877|Drosophila melanogaster CG30497-PA,
           isoform A protein.
          Length = 877

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +1

Query: 262 SESSYTSSEE-GCGAGERHAVLSYEQVRRLNDVMDEVVAIHGSRQLP 399
           S S + S E    G  +R AVLS+EQV +L+DVMDE VAIHG    P
Sbjct: 379 STSDHGSLESVDTGGTQRLAVLSFEQVSKLHDVMDEKVAIHGRGNFP 425



 Score = 34.3 bits (75), Expect = 0.10
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +2

Query: 383 GRGNFPTLHVRLRELVXXXXXXXXXXXXXXXXXXXXXXDVRLNGGA 520
           GRGNFPTL V+L++LV                      D+RLNGGA
Sbjct: 420 GRGNFPTLEVKLKDLV-NLVRRKLEAEVNAGGAGVLVKDIRLNGGA 464


>AY113648-1|AAM29653.1| 1308|Drosophila melanogaster SD12145p
           protein.
          Length = 1308

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 181 SVNMGVIKLSPDTASLISACDLLDDMKSESSYTSSEEGCGAG 306
           S  M  ++ +P+TASLIS   L++D     S + +  G G G
Sbjct: 613 STQMLAVRNNPETASLISGGGLVNDYTRSMSASGNAVGMGMG 654


>AL121804-6|CAB65858.1| 2160|Drosophila melanogaster EG:BACR7C10.2
            protein.
          Length = 2160

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 181  SVNMGVIKLSPDTASLISACDLLDDMKSESSYTSSEEGCGAG 306
            S  M  ++ +P+TASLIS   L++D     S + +  G G G
Sbjct: 1465 STQMLAVRNNPETASLISGGGLVNDYTRSMSASGNAVGMGMG 1506


>AE014298-425|AAF45800.2| 2178|Drosophila melanogaster CG10260-PB
            protein.
          Length = 2178

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 181  SVNMGVIKLSPDTASLISACDLLDDMKSESSYTSSEEGCGAG 306
            S  M  ++ +P+TASLIS   L++D     S + +  G G G
Sbjct: 1483 STQMLAVRNNPETASLISGGGLVNDYTRSMSASGNAVGMGMG 1524


>Y15594-1|CAA75689.1|  776|Drosophila melanogaster nicotinic
           acetylcholine receptoralpha 3 subunit protein.
          Length = 776

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 8/125 (6%)
 Frame = +1

Query: 157 SASRPDHKSVNMGVIKLSPDTASLISACDLLDDMKSESSYTSSEEGCGAGE--------R 312
           S +  D    N  VIK +    S+ +A  L D   S S      +G GAG          
Sbjct: 527 STTTSDLGMANPNVIKSTTTVNSVATASTLADSCCSCSGTIQIHQGMGAGAACQSSELLH 586

Query: 313 HAVLSYEQVRRLNDVMDEVVAIHGSRQLPYAARALTRACSXGCEPAWSWXGRLGGAGVSV 492
           H  L ++Q+        +    H  R    AA A   A + G  P+ S       A  + 
Sbjct: 587 HQQLHHQQMHHQQQQQQQQQHHHHQRPTTSAAAAAAAAAAGG--PSTS-AAAAAAAAAAA 643

Query: 493 RGCPP 507
            G PP
Sbjct: 644 AGTPP 648


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,895,812
Number of Sequences: 53049
Number of extensions: 393054
Number of successful extensions: 1456
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)