Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304A01f
         (472 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.8  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    23   7.1  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    23   7.1  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 63   QAKQAAKRVVQEQKRK-ECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAI 239
            QA+   ++ +++ K K E +       + LVD +   +A+A    + L  E   +HQ   
Sbjct: 864  QAEARQRQEIEKDKEKIELMKQEKAAHKTLVDQMEEEMAKARREVQALAKELAAIHQSIA 923

Query: 240  NFSKQTQ 260
            N   + +
Sbjct: 924  NIESRIE 930


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 109 LRFCSCTTRLAACFA*CSLIREDSIMI 29
           LRF  C T  A C   C+   E  ++I
Sbjct: 8   LRFGICLTVTAVCGVCCAAASEQGVLI 34


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 109 LRFCSCTTRLAACFA*CSLIREDSIMI 29
           LRF  C T  A C   C+   E  ++I
Sbjct: 8   LRFGICLTVTAVCGVCCAAASEQGVLI 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,182
Number of Sequences: 2352
Number of extensions: 9089
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)