Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303H12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.0  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.0  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.0  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   2.7  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         24   2.7  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   8.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   8.2  

>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = -1

Query: 305 VLNLASTIFPFSSTLICNFITSPHAGAPTRPVPTFLSFLSNEPTLRG 165
           V    +T+ P S+T        P    P    PT  +F   +PT  G
Sbjct: 114 VTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCAG 160


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = -1

Query: 305 VLNLASTIFPFSSTLICNFITSPHAGAPTRPVPTFLSFLSNEPTLRG 165
           V    +T+ P S+T        P    P    PT  +F   +PT  G
Sbjct: 114 VTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCAG 160


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = -1

Query: 305 VLNLASTIFPFSSTLICNFITSPHAGAPTRPVPTFLSFLSNEPTLRG 165
           V    +T+ P S+T        P    P    PT  +F   +PT  G
Sbjct: 114 VTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCAG 160


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = +1

Query: 370 VDEALKLKNTDIA---KELSLPPVKLHCSMLAEDAIKAALSDYRI 495
           ++E+LKL    +A   KELSL   +L  S++   A++  L  YR+
Sbjct: 138 MNESLKLLAMQVAQLSKELSLCRKELQESLMKNAALERELETYRM 182


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = -1

Query: 290 STIFPFSSTLICNFITSPHAGAPTRPVPTFLSFLSNEPTLRG 165
           +T+ P S+T        P    P    PT  +F   +PT  G
Sbjct: 119 ATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCAG 160


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 404 LLKSCPYHQSSFIALCL 454
           L K C YH   F+  CL
Sbjct: 846 LTKGCGYHLDLFVLACL 862


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 69  VD*KSHFIYFRKTNSDDKRSYIL 1
           VD  SH + F +TN+ DKR  ++
Sbjct: 550 VDAGSHAMSFGRTNNRDKRCLLV 572


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,580
Number of Sequences: 2352
Number of extensions: 10496
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)