BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303H09f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF217994-1|AAG17236.1| 353|Homo sapiens unknown protein. 33 0.80
Z84479-2|CAM26437.1| 548|Homo sapiens WAP, follistatin/kazal, i... 30 5.7
BC101606-1|AAI01607.1| 548|Homo sapiens WAP, follistatin/kazal,... 30 5.7
BC101602-1|AAI01603.1| 548|Homo sapiens WAP, follistatin/kazal,... 30 5.7
AY656810-1|AAT72343.1| 193|Homo sapiens H2B/t variant protein. 30 5.7
AY648853-1|AAT68256.1| 164|Homo sapiens histone H2B/s protein. 30 5.7
AF422194-1|AAL18839.1| 548|Homo sapiens putative multivalent pr... 30 5.7
AE006464-5|AAK61237.1| 491|Homo sapiens unknown protein. 30 5.7
BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4 p... 29 7.5
BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein. 29 7.5
AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4 p... 29 7.5
AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens ... 29 7.5
AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding prote... 29 7.5
AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB... 29 7.5
BC013178-1|AAH13178.1| 201|Homo sapiens SFRS16 protein protein. 29 9.9
AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding prote... 29 9.9
>AF217994-1|AAG17236.1| 353|Homo sapiens unknown protein.
Length = 353
Score = 32.7 bits (71), Expect = 0.80
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 340 KKKKKNSRGGPVPNS 384
KKKKKNSRGGPVP +
Sbjct: 46 KKKKKNSRGGPVPGN 60
>Z84479-2|CAM26437.1| 548|Homo sapiens WAP, follistatin/kazal,
immunoglobulin, kunitz and netrin domain containing 1
protein.
Length = 548
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 84 GTCSGNRNKLSVLPSHQQRISCIRCCPCRLCRTGGRFS-CLCRS 212
G C GN N S + R PCR CR + + LCRS
Sbjct: 390 GGCEGNGNNFHSRESCEDACPVPRTPPCRACRLRSKLALSLCRS 433
>BC101606-1|AAI01607.1| 548|Homo sapiens WAP, follistatin/kazal,
immunoglobulin, kunitz and netrin domain containing 1
protein.
Length = 548
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 84 GTCSGNRNKLSVLPSHQQRISCIRCCPCRLCRTGGRFS-CLCRS 212
G C GN N S + R PCR CR + + LCRS
Sbjct: 390 GGCEGNGNNFHSRESCEDACPVPRTPPCRACRLRSKLALSLCRS 433
>BC101602-1|AAI01603.1| 548|Homo sapiens WAP, follistatin/kazal,
immunoglobulin, kunitz and netrin domain containing 1,
protein.
Length = 548
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 84 GTCSGNRNKLSVLPSHQQRISCIRCCPCRLCRTGGRFS-CLCRS 212
G C GN N S + R PCR CR + + LCRS
Sbjct: 390 GGCEGNGNNFHSRESCEDACPVPRTPPCRACRLRSKLALSLCRS 433
>AY656810-1|AAT72343.1| 193|Homo sapiens H2B/t variant protein.
Length = 193
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 57 DTFKRTIGGGTCSGNRNKLSVLPSHQQRISCIRCCP 164
D F+R G + + NK S + S + R C CCP
Sbjct: 69 DIFERIAGEASRLAHYNKRSTITSRRSRRPCACCCP 104
>AY648853-1|AAT68256.1| 164|Homo sapiens histone H2B/s protein.
Length = 164
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 57 DTFKRTIGGGTCSGNRNKLSVLPSHQQRISCIRCCP 164
D F+R G + + NK S + S + R C CCP
Sbjct: 69 DIFERIAGEASRLAHYNKRSTITSRRSRRPCACCCP 104
>AF422194-1|AAL18839.1| 548|Homo sapiens putative multivalent
protease inhibitor WFIKKN protein.
Length = 548
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 84 GTCSGNRNKLSVLPSHQQRISCIRCCPCRLCRTGGRFS-CLCRS 212
G C GN N S + R PCR CR + + LCRS
Sbjct: 390 GGCEGNGNNFHSRESCEDACPVPRTPPCRACRLRSKLALSLCRS 433
>AE006464-5|AAK61237.1| 491|Homo sapiens unknown protein.
Length = 491
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 84 GTCSGNRNKLSVLPSHQQRISCIRCCPCRLCRTGGRFS-CLCRS 212
G C GN N S + R PCR CR + + LCRS
Sbjct: 333 GGCEGNGNNFHSRESCEDACPVPRTPPCRACRLRSKLALSLCRS 376
>BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -2
Query: 334 NR*ETFYSGCHLNRILRSGIKRQHSRQGQRDRGPKLPKGQMERHRQLKRPPVRHKRQGQQ 155
+R ET G +N +L +R+ ++R P +P+G + R ++++ R KR+
Sbjct: 342 HRVETKMKGNKVNEVLNRLHLAIPTRRDDKERPPFIPEGVVARRKRMETEESRKKRERDL 401
Query: 154 RMQL 143
+++
Sbjct: 402 ELEM 405
>BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein.
Length = 632
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -2
Query: 334 NR*ETFYSGCHLNRILRSGIKRQHSRQGQRDRGPKLPKGQMERHRQLKRPPVRHKRQGQQ 155
+R ET G +N +L +R+ ++R P +P+G + R ++++ R KR+
Sbjct: 340 HRVETKMKGNKVNEVLNRLHLAIPTRRDDKERPPFIPEGVVARRKRMETEESRKKRERDL 399
Query: 154 RMQL 143
+++
Sbjct: 400 ELEM 403
>AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -2
Query: 334 NR*ETFYSGCHLNRILRSGIKRQHSRQGQRDRGPKLPKGQMERHRQLKRPPVRHKRQGQQ 155
+R ET G +N +L +R+ ++R P +P+G + R ++++ R KR+
Sbjct: 342 HRVETKMKGNKVNEVLNRLHLAIPTRRDDKERPPFIPEGVVARRKRMETEESRKKRERDL 401
Query: 154 RMQL 143
+++
Sbjct: 402 ELEM 405
>AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ10690 fis, clone NT2RP3000350, weakly similar to
PROBABLE GTP-BINDING PROTEIN HP0303. ).
Length = 634
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -2
Query: 334 NR*ETFYSGCHLNRILRSGIKRQHSRQGQRDRGPKLPKGQMERHRQLKRPPVRHKRQGQQ 155
+R ET G +N +L +R+ ++R P +P+G + R ++++ R KR+
Sbjct: 342 HRVETKMKGNKVNEVLNRLHLAIPTRRDDKERPPFIPEGVVARRKRMETEESRKKRERDL 401
Query: 154 RMQL 143
+++
Sbjct: 402 ELEM 405
>AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding protein
CRFG protein.
Length = 634
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -2
Query: 334 NR*ETFYSGCHLNRILRSGIKRQHSRQGQRDRGPKLPKGQMERHRQLKRPPVRHKRQGQQ 155
+R ET G +N +L +R+ ++R P +P+G + R ++++ R KR+
Sbjct: 342 HRVETKMKGNKVNEVLNRLHLAIPTRRDDKERPPFIPEGVVARRKRMETEESRKKRERDL 401
Query: 154 RMQL 143
+++
Sbjct: 402 ELEM 405
>AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB
protein.
Length = 633
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -2
Query: 334 NR*ETFYSGCHLNRILRSGIKRQHSRQGQRDRGPKLPKGQMERHRQLKRPPVRHKRQGQQ 155
+R ET G +N +L +R+ ++R P +P+G + R ++++ R KR+
Sbjct: 342 HRVETKMKGNKVNEVLNRLHLAIPTRRDDKERPPFIPEGVVARRKRMETEESRKKRERDL 401
Query: 154 RMQL 143
+++
Sbjct: 402 ELEM 405
>BC013178-1|AAH13178.1| 201|Homo sapiens SFRS16 protein protein.
Length = 201
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 188 SLQLPMSLHLPLW*LRPPISLPLPAMLP 271
SLQLP+S L RPP LP+P ++P
Sbjct: 162 SLQLPLSPWWGLLPFRPPRPLPVPLLVP 189
>AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding protein
CRFG variant protein.
Length = 634
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -2
Query: 334 NR*ETFYSGCHLNRILRSGIKRQHSRQGQRDRGPKLPKGQMERHRQLKRPPVRHKRQGQQ 155
+R ET G +N +L +R+ ++R P +P+G + R ++++ R KR+
Sbjct: 342 HRVETKMKGNKVNEVLNRLHLAIPTRRDDKERPPFIPEGVVARKKRMETEESRKKRERDL 401
Query: 154 RMQL 143
+++
Sbjct: 402 ELEM 405
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,197,709
Number of Sequences: 237096
Number of extensions: 1362521
Number of successful extensions: 4347
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4342
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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